RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 CAPZA3Q96KX2 299 aa17.71■□□□□ 0.43
DDX41-207ENST00000507900 CYP3A43Q9HB55 503 aa17.71■□□□□ 0.43
DDX41-207ENST00000507900 AVENQ9NQS1 362 aaPredicted RBP17.71■□□□□ 0.43
DDX41-207ENST00000507900 DPP3Q9NY33 737 aa17.71■□□□□ 0.43
DDX41-207ENST00000507900 CNTN3Q9P232 1028 aa17.71■□□□□ 0.43
DDX41-207ENST00000507900 UVRAGQ9P2Y5 699 aa17.71■□□□□ 0.43
DDX41-207ENST00000507900 DDX20Q9UHI6 824 aaKnown RBP17.71■□□□□ 0.43
DDX41-207ENST00000507900 TRPV2Q9Y5S1 764 aa17.71■□□□□ 0.43
DDX41-207ENST00000507900 M0QZ92 97 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 CLSTN1O94985 981 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 CALCAP01258 141 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 MYBL1P10243 752 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 RBP5P82980 135 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 KCNA10Q16322 511 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 XKR4Q5GH76 650 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 PEX26Q7Z412 305 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 DAAM2Q86T65 1068 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 KIF12Q96FN5 646 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 P4HA1P13674 534 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 H2AFXP16104 143 aaPredicted RBP17.7■□□□□ 0.42
DDX41-207ENST00000507900 POLR2BP30876 1174 aaKnown RBP17.7■□□□□ 0.42
DDX41-207ENST00000507900 VEGFBP49765 207 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 NOMO3P69849 1222 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 FAM228AQ86W67 206 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 MCOLN2Q8IZK6 566 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 MSANTD4Q8NCY6 345 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 CAGE1Q8TC20 777 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 ZNF606Q8WXB4 792 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 ZNF653Q96CK0 615 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 HES6Q96HZ4 224 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 VCPIP1Q96JH7 1222 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 TRIM6Q9C030 488 aaPredicted RBP17.7■□□□□ 0.42
DDX41-207ENST00000507900 GOLPH3Q9H4A6 298 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 NXF3Q9H4D5 531 aaKnown RBP17.7■□□□□ 0.42
DDX41-207ENST00000507900 CTTNBP2NLQ9P2B4 639 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 POLIQ9UNA4 740 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 CDY2AQ9Y6F7 541 aa17.7■□□□□ 0.42
DDX41-207ENST00000507900 GRIN2DO15399 1336 aa17.69■□□□□ 0.42
DDX41-207ENST00000507900 THAP12O43422 761 aa17.69■□□□□ 0.42
DDX41-207ENST00000507900 CABYRO75952 493 aa17.69■□□□□ 0.42
DDX41-207ENST00000507900 RECQL4O94761 1208 aa17.69■□□□□ 0.42
DDX41-207ENST00000507900 LSM8O95777 96 aaKnown RBP17.69■□□□□ 0.42
DDX41-207ENST00000507900 WEE2P0C1S8 567 aa17.69■□□□□ 0.42
DDX41-207ENST00000507900 ZSCAN20P17040 1043 aaPredicted RBP17.69■□□□□ 0.42
DDX41-207ENST00000507900 CD58P19256 250 aa17.69■□□□□ 0.42
DDX41-207ENST00000507900 CXCR5P32302 372 aa17.69■□□□□ 0.42
DDX41-207ENST00000507900 MGAT3Q09327 533 aa17.69■□□□□ 0.42
DDX41-207ENST00000507900 WDR72Q3MJ13 1102 aa17.69■□□□□ 0.42
DDX41-207ENST00000507900 MON1BQ7L1V2 547 aa17.69■□□□□ 0.42
DDX41-207ENST00000507900 PHF13Q86YI8 300 aaPredicted RBP17.69■□□□□ 0.42
DDX41-207ENST00000507900 RAET1EQ8TD07 263 aa17.69■□□□□ 0.42
DDX41-207ENST00000507900 HPDLQ96IR7 371 aa17.69■□□□□ 0.42
DDX41-207ENST00000507900 PBKQ96KB5 322 aa17.69■□□□□ 0.42
DDX41-207ENST00000507900 ZMAT2Q96NC0 199 aaKnown RBP17.69■□□□□ 0.42
DDX41-207ENST00000507900 SENP6Q9GZR1 1112 aaPredicted RBP17.69■□□□□ 0.42
DDX41-207ENST00000507900 NXF1Q9UBU9 619 aaKnown RBP17.69■□□□□ 0.42
DDX41-207ENST00000507900 AMFRQ9UKV5 643 aa17.69■□□□□ 0.42
DDX41-207ENST00000507900 PCDHGC3Q9UN70 934 aa17.69■□□□□ 0.42
DDX41-207ENST00000507900 PACSIN2Q9UNF0 486 aaPredicted RBP17.69■□□□□ 0.42
DDX41-207ENST00000507900 AGAP1Q9UPQ3 857 aa17.69■□□□□ 0.42
DDX41-207ENST00000507900 PAEPP09466 180 aa17.68■□□□□ 0.42
DDX41-207ENST00000507900 KCNE1P15382 129 aa17.68■□□□□ 0.42
DDX41-207ENST00000507900 CDH5P33151 784 aaPredicted RBP17.68■□□□□ 0.42
DDX41-207ENST00000507900 NSFP46459 744 aaKnown RBP17.68■□□□□ 0.42
DDX41-207ENST00000507900 PRMT2P55345 433 aa17.68■□□□□ 0.42
DDX41-207ENST00000507900 PTPN11Q06124 597 aaPredicted RBP17.68■□□□□ 0.42
DDX41-207ENST00000507900 CFAP221Q4G0U5 840 aa17.68■□□□□ 0.42
DDX41-207ENST00000507900 FAM47CQ5HY64 1035 aa17.68■□□□□ 0.42
DDX41-207ENST00000507900 NAA35Q5VZE5 725 aa17.68■□□□□ 0.42
DDX41-207ENST00000507900 SCARA5Q6ZMJ2 495 aa17.68■□□□□ 0.42
DDX41-207ENST00000507900 RNF180Q86T96 592 aa17.68■□□□□ 0.42
DDX41-207ENST00000507900 TTC39CQ8N584 583 aa17.68■□□□□ 0.42
DDX41-207ENST00000507900 NOA1Q8NC60 698 aaKnown RBP17.68■□□□□ 0.42
DDX41-207ENST00000507900 WNT8BQ93098 351 aa17.68■□□□□ 0.42
DDX41-207ENST00000507900 CYFIP2Q96F07 1278 aa17.68■□□□□ 0.42
DDX41-207ENST00000507900 PSMB7Q99436 277 aa17.68■□□□□ 0.42
DDX41-207ENST00000507900 SDCBP2Q9H190 292 aa17.68■□□□□ 0.42
DDX41-207ENST00000507900 CNOT8Q9UFF9 292 aaKnown RBP17.68■□□□□ 0.42
DDX41-207ENST00000507900 NOC2LQ9Y3T9 749 aaKnown RBP17.68■□□□□ 0.42
DDX41-207ENST00000507900 CFHP08603 1231 aa17.67■□□□□ 0.42
DDX41-207ENST00000507900 PAFAH1B1P43034 410 aa17.67■□□□□ 0.42
DDX41-207ENST00000507900 INCA1Q0VD86 236 aa17.67■□□□□ 0.42
DDX41-207ENST00000507900 ARHGEF6Q15052 776 aa17.67■□□□□ 0.42
DDX41-207ENST00000507900 CCDC181Q5TID7 509 aa17.67■□□□□ 0.42
DDX41-207ENST00000507900 MTERF4Q7Z6M4 381 aaKnown RBP17.67■□□□□ 0.42
DDX41-207ENST00000507900 LRRC52Q8N7C0 313 aa17.67■□□□□ 0.42
DDX41-207ENST00000507900 BEST2Q8NFU1 509 aa17.67■□□□□ 0.42
DDX41-207ENST00000507900 ZNF564Q8TBZ8 553 aaPredicted RBP17.67■□□□□ 0.42
DDX41-207ENST00000507900 RPS6KC1Q96S38 1066 aa17.67■□□□□ 0.42
DDX41-207ENST00000507900 NUP85Q9BW27 656 aa17.67■□□□□ 0.42
DDX41-207ENST00000507900 ZNF518BQ9C0D4 1074 aa17.67■□□□□ 0.42
DDX41-207ENST00000507900 PDCL3Q9H2J4 239 aa17.67■□□□□ 0.42
DDX41-207ENST00000507900 ANKZF1Q9H8Y5 726 aa17.67■□□□□ 0.42
DDX41-207ENST00000507900 SAGE1Q9NXZ1 904 aa17.67■□□□□ 0.42
DDX41-207ENST00000507900 UBQLN1Q9UMX0 589 aaKnown RBP17.67■□□□□ 0.42
DDX41-207ENST00000507900 HES2Q9Y543 173 aa17.67■□□□□ 0.42
DDX41-207ENST00000507900 SCN1AP35498 2009 aa17.67■□□□□ 0.42
DDX41-207ENST00000507900 ATMINO43313 823 aaPredicted RBP17.66■□□□□ 0.42
DDX41-207ENST00000507900 CILPO75339 1184 aa17.66■□□□□ 0.42
DDX41-207ENST00000507900 CHRNA1P02708 482 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms