RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 SLFN14P0C7P3 912 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 MAPTP10636 758 aaKnown RBP8.74□□□□□ -1.01
SCN1A-207ENST00000507401 KCNE1P15382 129 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 SYT1P21579 422 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 RPL9P32969 192 aaKnown RBP8.74□□□□□ -1.01
SCN1A-207ENST00000507401 ZNF131P52739 623 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 NCKAP1LP55160 1127 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 UPP1Q16831 310 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 FAM171A1Q5VUB5 890 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 MPZL3Q6UWV2 235 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 OTOP3Q7RTS5 596 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 TXLNBQ8N3L3 684 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 ZNF511Q8NB15 262 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 LNX1Q8TBB1 728 aaPredicted RBP8.74□□□□□ -1.01
SCN1A-207ENST00000507401 RIN2Q8WYP3 895 aaPredicted RBP8.74□□□□□ -1.01
SCN1A-207ENST00000507401 PIK3R5Q8WYR1 880 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 TSPAN18Q96SJ8 248 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 PLIN2Q99541 437 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 PAAF1Q9BRP4 392 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 FAM117AQ9C073 453 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 CDT1Q9H211 546 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 CXCL16Q9H2A7 254 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 ZSCAN16Q9H4T2 348 aaPredicted RBP8.74□□□□□ -1.01
SCN1A-207ENST00000507401 MAN1C1Q9NR34 630 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 ZDHHC7Q9NXF8 308 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 FAM53CQ9NYF3 392 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 MAP10Q9P2G4 905 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 SORCS3Q9UPU3 1222 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 SRPRBQ9Y5M8 271 aaKnown RBP8.74□□□□□ -1.01
SCN1A-207ENST00000507401 MYO10Q9HD67 2058 aa8.74□□□□□ -1.01
SCN1A-207ENST00000507401 MYH11P35749 1972 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 CCDC195A0A1B0GUA6 201 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 VPS37CA5D8V6 355 aaPredicted RBP8.73□□□□□ -1.01
SCN1A-207ENST00000507401 TMEM221A6NGB7 291 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 CASTOR2A6NHX0 329 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 C2CD4DB7Z1M9 353 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 M0R296 226 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 CLDN3O15551 220 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 TGM5O43548 720 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 B3GAT3O94766 335 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 KIF4AO95239 1232 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 CCDC192P0DO97 292 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 FGFR3P22607 806 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 CDC25BP30305 580 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 PLA2G5P39877 138 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 CLCNKBP51801 687 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 TPM4P67936 248 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 MCL1Q07820 350 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 RAD51AP2Q09MP3 1159 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 MTMR3Q13615 1198 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 PTPAQ15257 358 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 KYAT1Q16773 422 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 ZNF568Q3ZCX4 644 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 RTP2Q5QGT7 225 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 KANK3Q6NY19 840 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 CD300LGQ6UXG3 332 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 HFE2Q6ZVN8 426 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 HAUS6Q7Z4H7 955 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 PALB2Q86YC2 1186 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 GOLGA6L1Q8N7Z2 621 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 TDRD5Q8NAT2 981 aaKnown RBP8.73□□□□□ -1.01
SCN1A-207ENST00000507401 KIF18AQ8NI77 898 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 RABGGTAQ92696 567 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 RAD54LQ92698 747 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 STAMQ92783 540 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 PBXIP1Q96AQ6 731 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 FAM122AQ96E09 287 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 PRRX2Q99811 253 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 CLSTN3Q9BQT9 956 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 PLEKHA5Q9HAU0 1116 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 PARVGQ9HBI0 331 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 WDR6Q9NNW5 1121 aaKnown RBP8.73□□□□□ -1.01
SCN1A-207ENST00000507401 BLOC1S4Q9NUP1 217 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 GEMIN8Q9NWZ8 242 aaKnown RBP8.73□□□□□ -1.01
SCN1A-207ENST00000507401 CNTN3Q9P232 1028 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 RAPGEFL1Q9UHV5 662 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 BACE2Q9Y5Z0 518 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 TECTAO75443 2155 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 TRIP11Q15643 1979 aa8.73□□□□□ -1.01
SCN1A-207ENST00000507401 AXIN1O15169 862 aa8.72□□□□□ -1.01
SCN1A-207ENST00000507401 HNRNPA1P09651 372 aaKnown RBP eCLIP8.72□□□□□ -1.01
SCN1A-207ENST00000507401 WEE2P0C1S8 567 aa8.72□□□□□ -1.01
SCN1A-207ENST00000507401 PLCG1P19174 1290 aa8.72□□□□□ -1.01
SCN1A-207ENST00000507401 GTF2BQ00403 316 aa8.72□□□□□ -1.01
SCN1A-207ENST00000507401 RAB33AQ14088 237 aa8.72□□□□□ -1.01
SCN1A-207ENST00000507401 PSMD5Q16401 504 aa8.72□□□□□ -1.01
SCN1A-207ENST00000507401 SLC10A6Q3KNW5 377 aa8.72□□□□□ -1.01
SCN1A-207ENST00000507401 LINC01559Q495D7 138 aa8.72□□□□□ -1.01
SCN1A-207ENST00000507401 CCDC149Q6ZUS6 474 aa8.72□□□□□ -1.01
SCN1A-207ENST00000507401 ZBTB33Q86T24 672 aa8.72□□□□□ -1.01
SCN1A-207ENST00000507401 MYCT1Q8N699 235 aa8.72□□□□□ -1.01
SCN1A-207ENST00000507401 CEP120Q8N960 986 aa8.72□□□□□ -1.01
SCN1A-207ENST00000507401 KREMEN2Q8NCW0 462 aa8.72□□□□□ -1.01
SCN1A-207ENST00000507401 EHBP1Q8NDI1 1231 aa8.72□□□□□ -1.01
SCN1A-207ENST00000507401 LARP4BQ92615 738 aaKnown RBP8.72□□□□□ -1.01
SCN1A-207ENST00000507401 NXPE3Q969Y0 559 aa8.72□□□□□ -1.01
SCN1A-207ENST00000507401 ASIC4Q96FT7 647 aa8.72□□□□□ -1.01
SCN1A-207ENST00000507401 ZBTB45Q96K62 511 aaPredicted RBP8.72□□□□□ -1.01
SCN1A-207ENST00000507401 B3GALT6Q96L58 329 aa8.72□□□□□ -1.01
SCN1A-207ENST00000507401 SNX27Q96L92 541 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms