RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 SND1Q7KZF4 910 aaKnown RBP eCLIP13.03□□□□□ -0.32
LIN54-206ENST00000506560 MON1BQ7L1V2 547 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 ZNF771Q7L3S4 317 aaPredicted RBP13.03□□□□□ -0.32
LIN54-206ENST00000506560 CXorf38Q8TB03 319 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 TMEM40Q8WWA1 233 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 CD101Q93033 1021 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 NFKBIZQ9BYH8 718 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 IMPG2Q9BZV3 1241 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 TJP2Q9UDY2 1190 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 CNTN6Q9UQ52 1028 aa13.03□□□□□ -0.32
LIN54-206ENST00000506560 CITO14578 2027 aa13.02□□□□□ -0.32
LIN54-206ENST00000506560 SCN1AP35498 2009 aa13.02□□□□□ -0.32
LIN54-206ENST00000506560 MYADML2A6NDP7 307 aa13.02□□□□□ -0.32
LIN54-206ENST00000506560 A6NJR5 290 aa13.02□□□□□ -0.32
LIN54-206ENST00000506560 PYGMP11217 842 aa13.02□□□□□ -0.32
LIN54-206ENST00000506560 TMOD1P28289 359 aa13.02□□□□□ -0.32
LIN54-206ENST00000506560 PEX5P50542 639 aa13.02□□□□□ -0.32
LIN54-206ENST00000506560 CENPCQ03188 943 aa13.02□□□□□ -0.32
LIN54-206ENST00000506560 C11orf63Q6NUN7 778 aa13.02□□□□□ -0.32
LIN54-206ENST00000506560 TSEN2Q8NCE0 465 aaKnown RBP13.02□□□□□ -0.32
LIN54-206ENST00000506560 TWNKQ96RR1 684 aa13.02□□□□□ -0.32
LIN54-206ENST00000506560 NIF3L1Q9GZT8 377 aa13.02□□□□□ -0.32
LIN54-206ENST00000506560 SMYD3Q9H7B4 428 aa13.02□□□□□ -0.32
LIN54-206ENST00000506560 GJD2Q9UKL4 321 aa13.02□□□□□ -0.32
LIN54-206ENST00000506560 MTA2O94776 668 aa13.02□□□□□ -0.33
LIN54-206ENST00000506560 NSFP46459 744 aaKnown RBP13.02□□□□□ -0.33
LIN54-206ENST00000506560 FAM187BQ17R55 369 aa13.02□□□□□ -0.33
LIN54-206ENST00000506560 WDR72Q3MJ13 1102 aa13.02□□□□□ -0.33
LIN54-206ENST00000506560 IFNLR1Q8IU57 520 aaPredicted RBP13.02□□□□□ -0.33
LIN54-206ENST00000506560 C1orf131Q8NDD1 294 aaKnown RBP13.02□□□□□ -0.33
LIN54-206ENST00000506560 USP6NLQ92738 828 aa13.02□□□□□ -0.33
LIN54-206ENST00000506560 EIF2AQ9BY44 585 aaKnown RBP13.02□□□□□ -0.33
LIN54-206ENST00000506560 CES2O00748 559 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 TREHO43280 583 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 SPOPO43791 374 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 F2P00734 622 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 TBXAS1P24557 533 aaPredicted RBP13.01□□□□□ -0.33
LIN54-206ENST00000506560 HOXA11P31270 313 aaPredicted RBP13.01□□□□□ -0.33
LIN54-206ENST00000506560 PTP4A2Q12974 167 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 DNAJB3Q8WWF6 145 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 ANKRD36BP1Q96IX9 119 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 HERPUD2Q9BSE4 406 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 TRIM51Q9BSJ1 452 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 ADAMTS10Q9H324 1103 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 HPCAL4Q9UM19 191 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 FAM155AB1AL88 458 aaPredicted RBP13.01□□□□□ -0.33
LIN54-206ENST00000506560 PPEF2O14830 753 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 TTI1O43156 1089 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 ATP8B1O43520 1251 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 ZEB2O60315 1214 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 GPR32O75388 356 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 ERLIN2O94905 339 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 TNNC2P02585 160 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 GABPB1Q06547 395 aaPredicted RBP13.01□□□□□ -0.33
LIN54-206ENST00000506560 TCEAL1Q15170 157 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 SGSM1Q2NKQ1 1148 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 WDTC1Q8N5D0 677 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 TRPV1Q8NER1 839 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 NEUROG2Q9H2A3 272 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 GDF3Q9NR23 364 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 COL1A2P08123 1366 aa13.01□□□□□ -0.33
LIN54-206ENST00000506560 A0A1B0GUA9 196 aa13□□□□□ -0.33
LIN54-206ENST00000506560 MANSC4A6NHS7 340 aaPredicted RBP13□□□□□ -0.33
LIN54-206ENST00000506560 MYL3P08590 195 aa13□□□□□ -0.33
LIN54-206ENST00000506560 TCF4P15884 667 aa13□□□□□ -0.33
LIN54-206ENST00000506560 RPL7AP62424 266 aaKnown RBP13□□□□□ -0.33
LIN54-206ENST00000506560 FAM193AP78312 1265 aa13□□□□□ -0.33
LIN54-206ENST00000506560 GLRA4Q5JXX5 417 aa13□□□□□ -0.33
LIN54-206ENST00000506560 CCDC70Q6NSX1 233 aa13□□□□□ -0.33
LIN54-206ENST00000506560 ZMAT2Q96NC0 199 aaKnown RBP13□□□□□ -0.33
LIN54-206ENST00000506560 CARD9Q9H257 536 aa13□□□□□ -0.33
LIN54-206ENST00000506560 ADAM22Q9P0K1 906 aa13□□□□□ -0.33
LIN54-206ENST00000506560 NPTXRO95502 500 aa13□□□□□ -0.33
LIN54-206ENST00000506560 SLC10A3P09131 477 aa13□□□□□ -0.33
LIN54-206ENST00000506560 MCF2P10911 925 aa13□□□□□ -0.33
LIN54-206ENST00000506560 CYP2C9P11712 490 aa13□□□□□ -0.33
LIN54-206ENST00000506560 POLR2BP30876 1174 aaKnown RBP13□□□□□ -0.33
LIN54-206ENST00000506560 TNNC1P63316 161 aa13□□□□□ -0.33
LIN54-206ENST00000506560 POU5F1BQ06416 359 aa13□□□□□ -0.33
LIN54-206ENST00000506560 MFSD10Q14728 455 aa13□□□□□ -0.33
LIN54-206ENST00000506560 TRIM31Q9BZY9 425 aa13□□□□□ -0.33
LIN54-206ENST00000506560 SNTG2Q9NY99 539 aa13□□□□□ -0.33
LIN54-206ENST00000506560 CYTH4Q9UIA0 394 aa13□□□□□ -0.33
LIN54-206ENST00000506560 ZNF236Q9UL36 1845 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 TNPO2O14787 897 aaKnown RBP12.99□□□□□ -0.33
LIN54-206ENST00000506560 ECHS1P30084 290 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 BPIFB4P59827 614 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 POU5F1Q01860 360 aaKnown RBP12.99□□□□□ -0.33
LIN54-206ENST00000506560 TRIM32Q13049 653 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 MAMLD1Q13495 774 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 CYP4A22Q5TCH4 519 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 WHAMMQ8TF30 809 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 C18orf8Q96DM3 657 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 UVRAGQ9P2Y5 699 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 AGPSO00116 658 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 TUBBP07437 444 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 GJC1P36383 396 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 AP3M2P53677 418 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 TAS2R40P59535 323 aa12.99□□□□□ -0.33
LIN54-206ENST00000506560 TERF2Q15554 542 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms