RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 KAZNQ674X7 775 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 GSTA5Q7RTV2 222 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 HOMEZQ8IX15 550 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 MICAL1Q8TDZ2 1067 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 FBF1Q8TES7 1133 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 MAIP1Q8WWC4 291 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 C12orf65Q9H3J6 166 aaKnown RBP12.6□□□□□ -0.39
UBE3D-206ENST00000505226 RNPEPL1Q9HAU8 725 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 TXLNGQ9NUQ3 528 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 ZNF219Q9P2Y4 722 aaPredicted RBP12.6□□□□□ -0.39
UBE3D-206ENST00000505226 USP21Q9UK80 565 aa12.6□□□□□ -0.39
UBE3D-206ENST00000505226 ABHD2P08910 425 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 TPBGLP0DKB5 382 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 GAD2Q05329 585 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 TAF11Q15544 211 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 SUPT20HQ8NEM7 779 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 NAF1Q96HR8 494 aaKnown RBP12.59□□□□□ -0.39
UBE3D-206ENST00000505226 MAK16Q9BXY0 300 aaKnown RBP12.59□□□□□ -0.39
UBE3D-206ENST00000505226 CYLDQ9NQC7 956 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 TELO2Q9Y4R8 837 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 PRPF4O43172 522 aaKnown RBP eCLIP12.59□□□□□ -0.39
UBE3D-206ENST00000505226 ENTPD3O75355 529 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 ENTPD5O75356 428 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 LYPLA2O95372 231 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 LINGO3P0C6S8 592 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 POTEJP0CG39 1038 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 CALB2P22676 271 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 GCNT1Q02742 428 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 PDK4Q16654 411 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 XKR9Q5GH70 373 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 ANO5Q75V66 913 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 LONP2Q86WA8 852 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 TMC2Q8TDI7 906 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 CLEC4DQ8WXI8 215 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 CCDC77Q9BR77 488 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 EHMT1Q9H9B1 1298 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 KANSL3Q9P2N6 904 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.59□□□□□ -0.39
UBE3D-206ENST00000505226 LRRC42Q9Y546 428 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 UBIAD1Q9Y5Z9 338 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 USH1CQ9Y6N9 552 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 PTPRJQ12913 1337 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 A6NHS1 94 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 LIASO43766 372 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 TYROBPO43914 113 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 PSMC4P43686 418 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 RPL7AP62424 266 aaKnown RBP12.59□□□□□ -0.39
UBE3D-206ENST00000505226 TRIM68Q6AZZ1 485 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 TXNRD3NBQ6F5E7 133 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 CAPRIN2Q6IMN6 1127 aaKnown RBP12.59□□□□□ -0.39
UBE3D-206ENST00000505226 C15orf39Q6ZRI6 1047 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 OTOAQ7RTW8 1153 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 RHOT1Q8IXI2 618 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 KATNAL2Q8IYT4 538 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 CHURC1Q8WUH1 139 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 FAM213AQ9BRX8 229 aa12.59□□□□□ -0.39
UBE3D-206ENST00000505226 DENND2DQ9H6A0 471 aaPredicted RBP12.59□□□□□ -0.39
UBE3D-206ENST00000505226 COL11A2P13942 1736 aaPredicted RBP12.59□□□□□ -0.39
UBE3D-206ENST00000505226 CLRN2A0PK11 232 aa12.58□□□□□ -0.4
UBE3D-206ENST00000505226 MYCNP04198 464 aaPredicted RBP12.58□□□□□ -0.4
UBE3D-206ENST00000505226 NSFP46459 744 aaKnown RBP12.58□□□□□ -0.4
UBE3D-206ENST00000505226 SNRPFP62306 86 aaKnown RBP12.58□□□□□ -0.4
UBE3D-206ENST00000505226 NOP14P78316 857 aaKnown RBP12.58□□□□□ -0.4
UBE3D-206ENST00000505226 EFTUD2Q15029 972 aaKnown RBP eCLIP12.58□□□□□ -0.4
UBE3D-206ENST00000505226 MAPK6Q16659 721 aa12.58□□□□□ -0.4
UBE3D-206ENST00000505226 WDR72Q3MJ13 1102 aa12.58□□□□□ -0.4
UBE3D-206ENST00000505226 RGS9BPQ6ZS82 235 aa12.58□□□□□ -0.4
UBE3D-206ENST00000505226 ACSF2Q96CM8 615 aaPredicted RBP12.58□□□□□ -0.4
UBE3D-206ENST00000505226 RAB3IPQ96QF0 476 aaPredicted RBP12.58□□□□□ -0.4
UBE3D-206ENST00000505226 CYP39A1Q9NYL5 469 aa12.58□□□□□ -0.4
UBE3D-206ENST00000505226 PCDHB2Q9Y5E7 798 aa12.58□□□□□ -0.4
UBE3D-206ENST00000505226 H0Y3Z8 333 aa12.58□□□□□ -0.4
UBE3D-206ENST00000505226 DNALI1O14645 258 aaPredicted RBP12.58□□□□□ -0.4
UBE3D-206ENST00000505226 PSTPIP1O43586 416 aa12.58□□□□□ -0.4
UBE3D-206ENST00000505226 ACO1P21399 889 aaKnown RBP12.58□□□□□ -0.4
UBE3D-206ENST00000505226 SSR1P43307 286 aaKnown RBP12.58□□□□□ -0.4
UBE3D-206ENST00000505226 TUBP50607 506 aa12.58□□□□□ -0.4
UBE3D-206ENST00000505226 MTMR1Q13613 665 aa12.58□□□□□ -0.4
UBE3D-206ENST00000505226 SPARCL1Q14515 664 aa12.58□□□□□ -0.4
UBE3D-206ENST00000505226 CTC1Q2NKJ3 1217 aa12.58□□□□□ -0.4
UBE3D-206ENST00000505226 TAF1BQ53T94 588 aaPredicted RBP12.58□□□□□ -0.4
UBE3D-206ENST00000505226 ANO7Q6IWH7 933 aa12.58□□□□□ -0.4
UBE3D-206ENST00000505226 TAS1R3Q7RTX0 852 aa12.58□□□□□ -0.4
UBE3D-206ENST00000505226 ZNF276Q8N554 614 aa12.58□□□□□ -0.4
UBE3D-206ENST00000505226 STK32AQ8WU08 396 aa12.58□□□□□ -0.4
UBE3D-206ENST00000505226 MIPEPQ99797 713 aa12.58□□□□□ -0.4
UBE3D-206ENST00000505226 SYNPO2Q9UMS6 1093 aa12.58□□□□□ -0.4
UBE3D-206ENST00000505226 EME2A4GXA9 379 aaPredicted RBP12.57□□□□□ -0.4
UBE3D-206ENST00000505226 PLSCR1O15162 318 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 MAP3K13O43283 966 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 KRT15P19012 456 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 ARSEP51690 589 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 RAD23BP54727 409 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 NFX1Q12986 1120 aaKnown RBP12.57□□□□□ -0.4
UBE3D-206ENST00000505226 TRAF1Q13077 416 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 SETDB1Q15047 1291 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 RFWD3Q6PCD5 774 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 MFSD7Q6UXD7 560 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 TDRPQ86YL5 185 aa12.57□□□□□ -0.4
UBE3D-206ENST00000505226 C4orf19Q8IY42 314 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms