RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ITGB3P05106 788 aa23.5■■□□□ 1.35
PTPN13-205ENST00000502971 RAET1EQ8TD07 263 aa23.5■■□□□ 1.35
PTPN13-205ENST00000502971 ZNF653Q96CK0 615 aa23.5■■□□□ 1.35
PTPN13-205ENST00000502971 HES6Q96HZ4 224 aa23.5■■□□□ 1.35
PTPN13-205ENST00000502971 GOLPH3Q9H4A6 298 aa23.5■■□□□ 1.35
PTPN13-205ENST00000502971 THAP12O43422 761 aa23.5■■□□□ 1.35
PTPN13-205ENST00000502971 PGK1P00558 417 aa23.5■■□□□ 1.35
PTPN13-205ENST00000502971 CENPCQ03188 943 aa23.5■■□□□ 1.35
PTPN13-205ENST00000502971 MMGT1Q8N4V1 131 aa23.5■■□□□ 1.35
PTPN13-205ENST00000502971 SPATA4Q8NEY3 305 aa23.5■■□□□ 1.35
PTPN13-205ENST00000502971 SELENOOQ9BVL4 669 aa23.5■■□□□ 1.35
PTPN13-205ENST00000502971 BCO2Q9BYV7 579 aa23.5■■□□□ 1.35
PTPN13-205ENST00000502971 GTF2IRD1Q9UHL9 959 aa23.5■■□□□ 1.35
PTPN13-205ENST00000502971 KCNK3O14649 394 aa23.49■■□□□ 1.35
PTPN13-205ENST00000502971 STAU1O95793 577 aaKnown RBP23.49■■□□□ 1.35
PTPN13-205ENST00000502971 YARSP54577 528 aaKnown RBP23.49■■□□□ 1.35
PTPN13-205ENST00000502971 TRIM32Q13049 653 aa23.49■■□□□ 1.35
PTPN13-205ENST00000502971 CXCL17Q6UXB2 119 aa23.49■■□□□ 1.35
PTPN13-205ENST00000502971 MCOLN2Q8IZK6 566 aa23.49■■□□□ 1.35
PTPN13-205ENST00000502971 TMEM40Q8WWA1 233 aa23.49■■□□□ 1.35
PTPN13-205ENST00000502971 AVENQ9NQS1 362 aaPredicted RBP23.49■■□□□ 1.35
PTPN13-205ENST00000502971 RAB21Q9UL25 225 aa23.49■■□□□ 1.35
PTPN13-205ENST00000502971 ADAMTS4O75173 837 aa23.48■■□□□ 1.35
PTPN13-205ENST00000502971 P4HA1P13674 534 aa23.48■■□□□ 1.35
PTPN13-205ENST00000502971 NSFP46459 744 aaKnown RBP23.48■■□□□ 1.35
PTPN13-205ENST00000502971 DNA2P51530 1060 aa23.48■■□□□ 1.35
PTPN13-205ENST00000502971 RBP5P82980 135 aa23.48■■□□□ 1.35
PTPN13-205ENST00000502971 NBPF20Q3BBV1 942 aa23.48■■□□□ 1.35
PTPN13-205ENST00000502971 ZNF606Q8WXB4 792 aa23.48■■□□□ 1.35
PTPN13-205ENST00000502971 VCPIP1Q96JH7 1222 aa23.48■■□□□ 1.35
PTPN13-205ENST00000502971 NUP85Q9BW27 656 aa23.48■■□□□ 1.35
PTPN13-205ENST00000502971 EIF2AQ9BY44 585 aaKnown RBP23.48■■□□□ 1.35
PTPN13-205ENST00000502971 XPNPEP3Q9NQH7 507 aa23.48■■□□□ 1.35
PTPN13-205ENST00000502971 DPP3Q9NY33 737 aa23.48■■□□□ 1.35
PTPN13-205ENST00000502971 SNTG2Q9NY99 539 aa23.48■■□□□ 1.35
PTPN13-205ENST00000502971 NXF1Q9UBU9 619 aaKnown RBP23.48■■□□□ 1.35
PTPN13-205ENST00000502971 CNOT8Q9UFF9 292 aaKnown RBP23.48■■□□□ 1.35
PTPN13-205ENST00000502971 FAM170AA1A519 330 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 HMGCRP04035 888 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 WEE2P0C1S8 567 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 RHOXF2BP0C7M4 288 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 CD58P19256 250 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 C2orf54Q08AI8 447 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 BRD3Q15059 726 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 WDR72Q3MJ13 1102 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 ZNF564Q8TBZ8 553 aaPredicted RBP23.47■■□□□ 1.35
PTPN13-205ENST00000502971 CYFIP2Q96F07 1278 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 KIF12Q96FN5 646 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 SNX27Q96L92 541 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 RHOXF2Q9BQY4 288 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 CELF4Q9BZC1 486 aaKnown RBP23.47■■□□□ 1.35
PTPN13-205ENST00000502971 TRIM6Q9C030 488 aaPredicted RBP23.47■■□□□ 1.35
PTPN13-205ENST00000502971 FAM124BQ9H5Z6 455 aaPredicted RBP23.47■■□□□ 1.35
PTPN13-205ENST00000502971 CYP3A43Q9HB55 503 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 SCN10AQ9Y5Y9 1956 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 RPLP2P05387 115 aaKnown RBP23.47■■□□□ 1.35
PTPN13-205ENST00000502971 POLR2BP30876 1174 aaKnown RBP23.47■■□□□ 1.35
PTPN13-205ENST00000502971 CLCN6P51797 869 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 NOMO3P69849 1222 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 NAA35Q5VZE5 725 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 CCDC70Q6NSX1 233 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 SCARA5Q6ZMJ2 495 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 RSPH3Q86UC2 560 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 SLAIN1Q8ND83 568 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 ACTRT1Q8TDG2 376 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 CPA5Q8WXQ8 436 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 MS4A14Q96JA4 679 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 RPS6KC1Q96S38 1066 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 POLIQ9UNA4 740 aa23.47■■□□□ 1.35
PTPN13-205ENST00000502971 PIN4Q9Y237 131 aaKnown RBP23.47■■□□□ 1.35
PTPN13-205ENST00000502971 TRIP12Q14669 1992 aaPredicted RBP23.46■■□□□ 1.35
PTPN13-205ENST00000502971 TARSL2A2RTX5 802 aaKnown RBP23.46■■□□□ 1.35
PTPN13-205ENST00000502971 ATMINO43313 823 aaPredicted RBP23.46■■□□□ 1.35
PTPN13-205ENST00000502971 PRKAR2AP13861 404 aaKnown RBP23.46■■□□□ 1.35
PTPN13-205ENST00000502971 PHF13Q86YI8 300 aaPredicted RBP23.46■■□□□ 1.35
PTPN13-205ENST00000502971 KLHDC9Q8NEP7 349 aa23.46■■□□□ 1.35
PTPN13-205ENST00000502971 HPDLQ96IR7 371 aa23.46■■□□□ 1.35
PTPN13-205ENST00000502971 TSPAN18Q96SJ8 248 aa23.46■■□□□ 1.35
PTPN13-205ENST00000502971 AGAP1Q9UPQ3 857 aa23.46■■□□□ 1.35
PTPN13-205ENST00000502971 ALG6Q9Y672 507 aa23.46■■□□□ 1.35
PTPN13-205ENST00000502971 RALGAPA2Q2PPJ7 1873 aa23.46■■□□□ 1.35
PTPN13-205ENST00000502971 MIF4GDA9UHW6 222 aaKnown RBP23.45■■□□□ 1.34
PTPN13-205ENST00000502971 M0QZ92 97 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 LSM8O95777 96 aaKnown RBP23.45■■□□□ 1.34
PTPN13-205ENST00000502971 CST5P28325 142 aaPredicted RBP23.45■■□□□ 1.34
PTPN13-205ENST00000502971 CCND3P30281 292 aaPredicted RBP23.45■■□□□ 1.34
PTPN13-205ENST00000502971 MRPS6P82932 125 aaKnown RBP23.45■■□□□ 1.34
PTPN13-205ENST00000502971 MON1BQ7L1V2 547 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 SESTD1Q86VW0 696 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 EHD2Q9NZN4 543 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 CITO14578 2027 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 CCDC151A5D8V7 595 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 DDX3YO15523 660 aaKnown RBP23.45■■□□□ 1.34
PTPN13-205ENST00000502971 PAEPP09466 180 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 MCM3P25205 808 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 LIN9Q5TKA1 542 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 WDR93Q6P2C0 686 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 TMCO3Q6UWJ1 677 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 ALKAL1Q6UXT8 129 aa23.45■■□□□ 1.34
PTPN13-205ENST00000502971 RASGEF1CQ8N431 466 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms