RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 ECHDC2Q86YB7 292 aa5.88□□□□□ -1.47
FXN-205ENST00000498653 RNF168Q8IYW5 571 aaPredicted RBP5.88□□□□□ -1.47
FXN-205ENST00000498653 CEP76Q8TAP6 659 aa5.88□□□□□ -1.47
FXN-205ENST00000498653 SETD7Q8WTS6 366 aaKnown RBP5.88□□□□□ -1.47
FXN-205ENST00000498653 CHURC1Q8WUH1 139 aa5.88□□□□□ -1.47
FXN-205ENST00000498653 OSBP2Q969R2 916 aa5.88□□□□□ -1.47
FXN-205ENST00000498653 MKL1Q969V6 931 aa5.88□□□□□ -1.47
FXN-205ENST00000498653 MIB2Q96AX9 1013 aa5.88□□□□□ -1.47
FXN-205ENST00000498653 MBOAT7Q96N66 472 aa5.88□□□□□ -1.47
FXN-205ENST00000498653 SEC62Q99442 399 aaKnown RBP5.88□□□□□ -1.47
FXN-205ENST00000498653 PUS7LQ9H0K6 701 aaKnown RBP5.88□□□□□ -1.47
FXN-205ENST00000498653 DNMT3BQ9UBC3 853 aaKnown RBP5.88□□□□□ -1.47
FXN-205ENST00000498653 FBXW11Q9UKB1 542 aa5.88□□□□□ -1.47
FXN-205ENST00000498653 SYNPO2Q9UMS6 1093 aa5.88□□□□□ -1.47
FXN-205ENST00000498653 ST3GAL5Q9UNP4 418 aa5.88□□□□□ -1.47
FXN-205ENST00000498653 BTBD3Q9Y2F9 522 aa5.88□□□□□ -1.47
FXN-205ENST00000498653 ABCB11O95342 1321 aa5.88□□□□□ -1.47
FXN-205ENST00000498653 KMT2CQ8NEZ4 4911 aaKnown RBP5.87□□□□□ -1.47
FXN-205ENST00000498653 ESYT2A0FGR8 921 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 M0QZ92 97 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 ZNF263O14978 683 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 GPAA1O43292 621 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 ATG13O75143 517 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 SEMA7AO75326 666 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 PPFIA2O75334 1257 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 RPS6KA5O75582 802 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 REC8O95072 547 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 POU2F2P09086 479 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 HNRNPA1P09651 372 aaKnown RBP eCLIP5.87□□□□□ -1.47
FXN-205ENST00000498653 ITGB5P18084 799 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 GNAT2P19087 354 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 HOXA9P31269 272 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 CASRP41180 1078 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 UQCRFS1P47985 274 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 KPNA1P52294 538 aaPredicted RBP5.87□□□□□ -1.47
FXN-205ENST00000498653 IKQ13123 557 aaPredicted RBP5.87□□□□□ -1.47
FXN-205ENST00000498653 PPFIA1Q13136 1202 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 TARDBPQ13148 414 aaKnown RBP eCLIP5.87□□□□□ -1.47
FXN-205ENST00000498653 UVSSAQ2YD98 709 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 PABPC1LQ4VXU2 614 aaKnown RBP5.87□□□□□ -1.47
FXN-205ENST00000498653 DCAF6Q58WW2 860 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 C12orf60Q5U649 245 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 FSTL4Q6MZW2 842 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 USP49Q70CQ1 688 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 LPCAT2Q7L5N7 544 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 FAM228AQ86W67 206 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 DHX40Q8IX18 779 aaKnown RBP5.87□□□□□ -1.47
FXN-205ENST00000498653 LCORLQ8N3X6 602 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 LINC01465Q8N7H1 131 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 FRMD1Q8N878 549 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 OLIG1Q8TAK6 271 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 DEPDC1BQ8WUY9 529 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 KCNE4Q8WWG9 221 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 GMCL1Q96IK5 515 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 FAM20AQ96MK3 541 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 ASB16Q96NS5 453 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 TAAR1Q96RJ0 339 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 STRBPQ96SI9 672 aaKnown RBP5.87□□□□□ -1.47
FXN-205ENST00000498653 CDC6Q99741 560 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 TTPALQ9BTX7 342 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 CRNKL1Q9BZJ0 848 aaKnown RBP5.87□□□□□ -1.47
FXN-205ENST00000498653 ARMT1Q9H993 441 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 CBX8Q9HC52 389 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 ZFP14Q9HCL3 533 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 ANO2Q9NQ90 1003 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 DONSONQ9NYP3 566 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 ZNF215Q9UL58 517 aaPredicted RBP5.87□□□□□ -1.47
FXN-205ENST00000498653 SLC4A4Q9Y6R1 1079 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 UBE4BO95155 1302 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 ANK2Q01484 3957 aa5.87□□□□□ -1.47
FXN-205ENST00000498653 MN1Q10571 1320 aaPredicted RBP5.87□□□□□ -1.47
FXN-205ENST00000498653 ZFC3H1O60293 1989 aaKnown RBP5.87□□□□□ -1.47
FXN-205ENST00000498653 COL1A2P08123 1366 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 KIAA1324LA8MWY0 1029 aaPredicted RBP5.86□□□□□ -1.47
FXN-205ENST00000498653 PATL2C9JE40 543 aaKnown RBP5.86□□□□□ -1.47
FXN-205ENST00000498653 MEN1O00255 615 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 BACH1O14867 736 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 SPINT1O43278 529 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 EIF3JO75822 258 aaKnown RBP5.86□□□□□ -1.47
FXN-205ENST00000498653 APPP05067 770 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 RPLP2P05387 115 aaKnown RBP5.86□□□□□ -1.47
FXN-205ENST00000498653 SYPP08247 313 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 HNF1BP35680 557 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 CLN3Q13286 438 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 DMC1Q14565 340 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 CCDC157Q569K6 752 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 DBX2Q6ZNG2 339 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 KCTD1Q719H9 257 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 SYT13Q7L8C5 426 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 TRIM46Q7Z4K8 759 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 ZNF589Q86UQ0 364 aaPredicted RBP5.86□□□□□ -1.47
FXN-205ENST00000498653 PTRH1Q86Y79 214 aaKnown RBP5.86□□□□□ -1.47
FXN-205ENST00000498653 ZNF564Q8TBZ8 553 aaPredicted RBP5.86□□□□□ -1.47
FXN-205ENST00000498653 CSGALNACT1Q8TDX6 532 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 EXTL1Q92935 676 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 CHMP4CQ96CF2 233 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 RSPRY1Q96DX4 576 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 CHFRQ96EP1 664 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 CEP95Q96GE4 821 aa5.86□□□□□ -1.47
FXN-205ENST00000498653 CLSTN3Q9BQT9 956 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms