RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 RHOT2Q8IXI1 618 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 SYCE1Q8N0S2 351 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 UBR7Q8N806 425 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 C1orf127Q8N9H9 656 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 PCSK9Q8NBP7 692 aaKnown RBP8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 TPCN2Q8NHX9 752 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 TMEM40Q8WWA1 233 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 UBXN4Q92575 508 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 TAF4BQ92750 862 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 ARHGEF26Q96DR7 871 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 TRIM11Q96F44 468 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 OSBPL9Q96SU4 736 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 APOL6Q9BWW8 343 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 EIF2AQ9BY44 585 aaKnown RBP8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 THAP2Q9H0W7 228 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 PDCL3Q9H2J4 239 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 CDHR5Q9HBB8 845 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 DDX20Q9UHI6 824 aaKnown RBP8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 ITGA11Q9UKX5 1188 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 POLIQ9UNA4 740 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 PCDHB2Q9Y5E7 798 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 CDY2AQ9Y6F7 541 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 PTPRSQ13332 1948 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 MEFVO15553 781 aaPredicted RBP8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 GNRH1P01148 92 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 CALCAP01258 141 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 INHAP05111 366 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 GZMAP12544 262 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 P4HA1P13674 534 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 YY1P25490 414 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 MAP2K2P36507 400 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 RAP1GAPP47736 663 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 VEGFBP49765 207 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 GUCY2FP51841 1108 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 ZNF132P52740 706 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 TNNC1P63316 161 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 NAA30Q147X3 362 aaPredicted RBP8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 SLC10A6Q3KNW5 377 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 MAP3K21Q5TCX8 1036 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 CCDC181Q5TID7 509 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 NAA35Q5VZE5 725 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 TWF2Q6IBS0 349 aaKnown RBP8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 PPP1R2P3Q6NXS1 205 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 RNF180Q86T96 592 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 SESTD1Q86VW0 696 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 FAM228AQ86W67 206 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 PASD1Q8IV76 773 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 NME8Q8N427 588 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 ZNF784Q8NCA9 323 aaPredicted RBP8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 SLAIN1Q8ND83 568 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 DDX1Q92499 740 aaKnown RBP8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 PCDHB18PQ96TA0 734 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 PSMB7Q99436 277 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 CELF4Q9BZC1 486 aaKnown RBP8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 XYLT2Q9H1B5 865 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 ISCUQ9H1K1 167 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 GOLPH3Q9H4A6 298 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 SMYD3Q9H7B4 428 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 OSGEPQ9NPF4 335 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 SCUBE2Q9NQ36 999 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 SNTG2Q9NY99 539 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 CTTNBP2NLQ9P2B4 639 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 NXF1Q9UBU9 619 aaKnown RBP8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 SIX4Q9UIU6 781 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 GTF3C4Q9UKN8 822 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 PACSIN2Q9UNF0 486 aaPredicted RBP8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 DERAQ9Y315 318 aa8.63□□□□□ -1.03
PDZRN3-212ENST00000498048 PLXNA3P51805 1871 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 TET1Q8NFU7 2136 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 XPOTO43592 962 aaKnown RBP8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 SRGAP2O75044 1071 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 FKTNO75072 461 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 KIF4AO95239 1232 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 CST3P01034 146 aaPredicted RBP8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 FTLP02792 175 aaPredicted RBP8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 BRD2P25440 801 aaKnown RBP8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 HOXA11P31270 313 aaPredicted RBP8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 ATICP31939 592 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 NSFP46459 744 aaKnown RBP8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 NOMO3P69849 1222 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 CENPCQ03188 943 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 ARHGEF6Q15052 776 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 KCNA10Q16322 511 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 PTPROQ16827 1216 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 ERCC6LQ2NKX8 1250 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 GLRA4Q5JXX5 417 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 MEI1Q5TIA1 1274 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 C11orf63Q6NUN7 778 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 PEX26Q7Z412 305 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 DAAM2Q86T65 1068 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 SERINC5Q86VE9 423 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 TMEM130Q8N3G9 435 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 LRRC57Q8N9N7 239 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 KLHDC9Q8NEP7 349 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 BEST2Q8NFU1 509 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 ZNF564Q8TBZ8 553 aaPredicted RBP8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 PXYLP1Q8TE99 480 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 ANKRD7Q92527 254 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 RPGRIP1Q96KN7 1286 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 CALR3Q96L12 384 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms