RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 HERVK_113P62684 666 aa6.23□□□□□ -1.41
GGPS1-208ENST00000497327 LACTBP83111 547 aaPredicted RBP6.23□□□□□ -1.41
GGPS1-208ENST00000497327 CXCL9Q07325 125 aa6.23□□□□□ -1.41
GGPS1-208ENST00000497327 TM4SF20Q53R12 229 aa6.23□□□□□ -1.41
GGPS1-208ENST00000497327 KANK2Q63ZY3 851 aa6.23□□□□□ -1.41
GGPS1-208ENST00000497327 FSTL4Q6MZW2 842 aa6.23□□□□□ -1.41
GGPS1-208ENST00000497327 CDC42EP5Q6NZY7 148 aa6.23□□□□□ -1.41
GGPS1-208ENST00000497327 MAMDC4Q6UXC1 1216 aa6.23□□□□□ -1.41
GGPS1-208ENST00000497327 MFSD6Q6ZSS7 791 aa6.23□□□□□ -1.41
GGPS1-208ENST00000497327 CHST3Q7LGC8 479 aa6.23□□□□□ -1.41
GGPS1-208ENST00000497327 TGFBRAP1Q8WUH2 860 aa6.23□□□□□ -1.41
GGPS1-208ENST00000497327 TEKT1Q969V4 418 aa6.23□□□□□ -1.41
GGPS1-208ENST00000497327 ZNF274Q96GC6 653 aaPredicted RBP6.23□□□□□ -1.41
GGPS1-208ENST00000497327 LRRC2Q9BYS8 371 aa6.23□□□□□ -1.41
GGPS1-208ENST00000497327 KRT23Q9C075 422 aa6.23□□□□□ -1.41
GGPS1-208ENST00000497327 SLKQ9H2G2 1235 aaPredicted RBP6.23□□□□□ -1.41
GGPS1-208ENST00000497327 RNF41Q9H4P4 317 aaPredicted RBP6.23□□□□□ -1.41
GGPS1-208ENST00000497327 CHMP5Q9NZZ3 219 aa6.23□□□□□ -1.41
GGPS1-208ENST00000497327 ARPP21Q9UBL0 812 aaPredicted RBP6.23□□□□□ -1.41
GGPS1-208ENST00000497327 NR2E1Q9Y466 385 aa6.23□□□□□ -1.41
GGPS1-208ENST00000497327 SCN9AQ15858 1988 aa6.23□□□□□ -1.41
GGPS1-208ENST00000497327 MYO3BQ8WXR4 1341 aa6.23□□□□□ -1.41
GGPS1-208ENST00000497327 B4E1Z4 1266 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 NPIPB8E9PQR5 432 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 FZD9O00144 591 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 ARHGAP6O43182 974 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 PFKFB2O60825 505 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 CRTAMO95727 393 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 ACO1P21399 889 aaKnown RBP6.22□□□□□ -1.41
GGPS1-208ENST00000497327 PDIA3P30101 505 aaKnown RBP6.22□□□□□ -1.41
GGPS1-208ENST00000497327 LIFRP42702 1097 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 NT5C2P49902 561 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 PLCD1P51178 756 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 KCNQ1P51787 676 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 GABREP78334 506 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 TRDNQ13061 729 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 EIF4HQ15056 248 aaKnown RBP6.22□□□□□ -1.41
GGPS1-208ENST00000497327 TRIM68Q6AZZ1 485 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 LRSAM1Q6UWE0 723 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 NOL8Q76FK4 1167 aaKnown RBP6.22□□□□□ -1.41
GGPS1-208ENST00000497327 POLNQ7Z5Q5 900 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 SGMS1Q86VZ5 419 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 NOSTRINQ8IVI9 506 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 MAPKAPK5Q8IW41 473 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 NIM1KQ8IY84 436 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 TEX11Q8IYF3 940 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 NECAB1Q8N987 351 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 AGBL3Q8NEM8 1001 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 EXTL1Q92935 676 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 GTF3C6Q969F1 213 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 ZBED3Q96IU2 234 aaPredicted RBP6.22□□□□□ -1.41
GGPS1-208ENST00000497327 NOL10Q9BSC4 688 aaKnown RBP6.22□□□□□ -1.41
GGPS1-208ENST00000497327 MENTQ9BUN1 341 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 IDI2Q9BXS1 227 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 DDX4Q9NQI0 724 aaKnown RBP6.22□□□□□ -1.41
GGPS1-208ENST00000497327 MCM9Q9NXL9 1143 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 PPP1R1BQ9UD71 204 aaPredicted RBP6.22□□□□□ -1.41
GGPS1-208ENST00000497327 PCDHAC2Q9Y5I4 1007 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 ZNF646O15015 1829 aaPredicted RBP6.22□□□□□ -1.41
GGPS1-208ENST00000497327 FLT1P17948 1338 aa6.22□□□□□ -1.41
GGPS1-208ENST00000497327 BRCA1P38398 1863 aaKnown RBP6.22□□□□□ -1.41
GGPS1-208ENST00000497327 PRAMEF25A6NGN4 478 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 CDC14BO60729 498 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 CTDNEP1O95476 244 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 HMGCRP04035 888 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 ZNF280AP59817 542 aaPredicted RBP6.21□□□□□ -1.42
GGPS1-208ENST00000497327 GABPAQ06546 454 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 PKP1Q13835 747 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 CRY1Q16526 586 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 NRN1LQ496H8 165 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 USP39Q53GS9 565 aaKnown RBP6.21□□□□□ -1.42
GGPS1-208ENST00000497327 NAALADL2Q58DX5 795 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 CLEC17AQ6ZS10 378 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 C16orf86Q6ZW13 317 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 CCDC83Q8IWF9 413 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 ANKS1AQ92625 1134 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 ESR2Q92731 530 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 OR14A2Q96R54 314 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 SYT17Q9BSW7 474 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 DHRS4Q9BTZ2 278 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 BTBD2Q9BX70 525 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 ZNF341Q9BYN7 854 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 KRTAP9-8Q9BYQ0 159 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 OSBPL5Q9H0X9 879 aaPredicted RBP6.21□□□□□ -1.42
GGPS1-208ENST00000497327 LY9Q9HBG7 655 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 FBXO10Q9UK96 956 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 MRPS23Q9Y3D9 190 aaKnown RBP6.21□□□□□ -1.42
GGPS1-208ENST00000497327 MYH13Q9UKX3 1938 aa6.21□□□□□ -1.42
GGPS1-208ENST00000497327 FER1L6Q2WGJ9 1857 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 KLF18A0A0U1RQI7 1052 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 CCDC85CA6NKD9 419 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 OVOL3O00110 214 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 PRDM1O75626 825 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 HSP90AA1P07900 732 aaKnown RBP6.2□□□□□ -1.42
GGPS1-208ENST00000497327 SLC3A2P08195 630 aaKnown RBP6.2□□□□□ -1.42
GGPS1-208ENST00000497327 MMEP08473 750 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 NAT1P18440 290 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 ECE1P42892 770 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 NOVP48745 357 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 MMP14P50281 582 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms