RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 GPR88Q9GZN0 384 aa10.98□□□□□ -0.65
HDAC3-214ENST00000495485 HAPLN2Q9GZV7 340 aa10.98□□□□□ -0.65
HDAC3-214ENST00000495485 CDT1Q9H211 546 aa10.98□□□□□ -0.65
HDAC3-214ENST00000495485 PRO3102Q9H379 93 aa10.98□□□□□ -0.65
HDAC3-214ENST00000495485 AJAP1Q9UKB5 411 aaPredicted RBP10.98□□□□□ -0.65
HDAC3-214ENST00000495485 PCDHGC5Q9Y5F6 944 aa10.98□□□□□ -0.65
HDAC3-214ENST00000495485 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.98□□□□□ -0.65
HDAC3-214ENST00000495485 MYH10P35580 1976 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 RCCD1A6NED2 376 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 CES2O00748 559 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 ABLIM1O14639 778 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 CYP26A1O43174 497 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 FGBP02675 491 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 MYBL1P10243 752 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 CSF2RAP15509 400 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 CYP11B1P15538 503 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 SYN1P17600 705 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 ARF4P18085 180 aaPredicted RBP10.97□□□□□ -0.65
HDAC3-214ENST00000495485 EIF4BP23588 611 aaKnown RBP10.97□□□□□ -0.65
HDAC3-214ENST00000495485 TNFSF9P41273 254 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 GRM5P41594 1212 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 GALCP54803 685 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 CCL23P55773 120 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 NOP14P78316 857 aaKnown RBP10.97□□□□□ -0.65
HDAC3-214ENST00000495485 GPC5P78333 572 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 CUL2Q13617 745 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 IKBKEQ14164 716 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 ZNF699Q32M78 642 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 PLEKHG4Q58EX7 1191 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 FBXO47Q5MNV8 452 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 TRAF7Q6Q0C0 670 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 RUFY4Q6ZNE9 571 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 HACE1Q8IYU2 909 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 TDHQ8IZJ6 230 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 GPR161Q8N6U8 529 aaKnown RBP10.97□□□□□ -0.65
HDAC3-214ENST00000495485 PHOSPHO2Q8TCD6 241 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 RFFLQ8WZ73 363 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 HERVK_113Q902F9 699 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 TATDN2Q93075 761 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 PBKQ96KB5 322 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 FAM49AQ9H0Q0 323 aaPredicted RBP10.97□□□□□ -0.65
HDAC3-214ENST00000495485 ISCUQ9H1K1 167 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 PDZD7Q9H5P4 517 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 TRIM10Q9UDY6 481 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 LCMT1Q9UIC8 334 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 C2CD2Q9Y426 696 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 PCDHB4Q9Y5E5 795 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 CDY2AQ9Y6F7 541 aa10.97□□□□□ -0.65
HDAC3-214ENST00000495485 NCANO14594 1321 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 A0A0U1RQJ8 604 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 B4GALT5O43286 388 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 MED7O43513 233 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 BUB1O43683 1085 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 FAM189A1O60320 539 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 TSPAN1O60635 241 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 ABL1P00519 1130 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 ASS1P00966 412 aaKnown RBP10.96□□□□□ -0.65
HDAC3-214ENST00000495485 CHRNA1P02708 482 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 DARSP14868 501 aaKnown RBP10.96□□□□□ -0.65
HDAC3-214ENST00000495485 ATF7P17544 494 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-214ENST00000495485 ITGB8P26012 769 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 HADHBP55084 474 aaKnown RBP10.96□□□□□ -0.65
HDAC3-214ENST00000495485 MYO1EQ12965 1108 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 TMEM132DQ14C87 1099 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 TCEAL1Q15170 157 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 AMHR2Q16671 573 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 KIZQ2M2Z5 673 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 ZNF667Q5HYK9 610 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 LIN9Q5TKA1 542 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 LMBRD2Q68DH5 695 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-214ENST00000495485 PDCL2Q8N4E4 241 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 EPS8L1Q8TE68 723 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 ATRIPQ8WXE1 791 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 RABGGTAQ92696 567 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 ZNF668Q96K58 619 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-214ENST00000495485 KREMEN1Q96MU8 473 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 NIF3L1Q9GZT8 377 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 ADAMTS10Q9H324 1103 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 MINDY3Q9H8M7 445 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 CHST12Q9NRB3 414 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 AMFRQ9UKV5 643 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 ITGA11Q9UKX5 1188 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 NENFQ9UMX5 172 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 SNX12Q9UMY4 172 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 CEP83Q9Y592 693 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 DUSP10Q9Y6W6 482 aa10.96□□□□□ -0.65
HDAC3-214ENST00000495485 LACTBL1A8MY62 500 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 GPR32O75388 356 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 RPS6KA5O75582 802 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 PALMO75781 387 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 VNN1O95497 513 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 FTLP02792 175 aaPredicted RBP10.95□□□□□ -0.66
HDAC3-214ENST00000495485 ATP1A1P05023 1023 aaKnown RBP10.95□□□□□ -0.66
HDAC3-214ENST00000495485 EDN1P05305 212 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 KRT19P08727 400 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 SKIP12755 728 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 OSTNP61366 133 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 RBP5P82980 135 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 AMPD2Q01433 879 aa10.95□□□□□ -0.66
HDAC3-214ENST00000495485 ITIH3Q06033 890 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms