RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 SCYL3Q8IZE3 742 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 MCOLN2Q8IZK6 566 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 FLAD1Q8NFF5 587 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 DTX3LQ8TDB6 740 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 FAM149B1Q96BN6 582 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 RPTORQ8N122 1335 aa14.24□□□□□ -0.13
GPC1-209ENST00000495100 CCDC88AQ3V6T2 1871 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 C2orf71A6NGG8 1288 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 DIAPH2O60879 1101 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 MAGEA4P43358 317 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 IL31Q6EBC2 164 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 RHOT1Q8IXI2 618 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 STAMBPL1Q96FJ0 436 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 RUNDC3BQ96NL0 473 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 A1CFQ9NQ94 594 aaKnown RBP14.23□□□□□ -0.13
GPC1-209ENST00000495100 CLEC11AQ9Y240 323 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 MYH4Q9Y623 1939 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 CFAP69A5D8W1 941 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 A6NNZ2 444 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 F7P08709 466 aaPredicted RBP14.23□□□□□ -0.13
GPC1-209ENST00000495100 TUBB8Q3ZCM7 444 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 ANKRD20A8PQ5CZ79 823 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 ISLR2Q6UXK2 745 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 LRIG3Q6UXM1 1119 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 RTKN2Q8IZC4 609 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 RNF169Q8NCN4 708 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 ATL2Q8NHH9 583 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 MAML1Q92585 1016 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 GRHL1Q9NZI5 618 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 HAO1Q9UJM8 370 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 TPX2Q9ULW0 747 aaKnown RBP14.23□□□□□ -0.13
GPC1-209ENST00000495100 PCDHB2Q9Y5E7 798 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 B4GALT5O43286 388 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 STAT5BP51692 787 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 KRT81Q14533 505 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 PKN2Q16513 984 aaKnown RBP14.23□□□□□ -0.13
GPC1-209ENST00000495100 DALRD3Q5D0E6 543 aaKnown RBP14.23□□□□□ -0.13
GPC1-209ENST00000495100 FAM71AQ8IYT1 594 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 PPM1NQ8N819 430 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 CLEC4DQ8WXI8 215 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 FAM129AQ9BZQ8 928 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 CNOT10Q9H9A5 744 aaKnown RBP14.23□□□□□ -0.13
GPC1-209ENST00000495100 SHANK3Q9BYB0 1731 aa14.23□□□□□ -0.13
GPC1-209ENST00000495100 GTPBP10A4D1E9 387 aaKnown RBP14.22□□□□□ -0.13
GPC1-209ENST00000495100 WDR46O15213 610 aaKnown RBP14.22□□□□□ -0.13
GPC1-209ENST00000495100 PCK1P35558 622 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 KIF22Q14807 665 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 STXBP2Q15833 593 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 FAM102AQ5T9C2 384 aaPredicted RBP14.22□□□□□ -0.13
GPC1-209ENST00000495100 C11orf63Q6NUN7 778 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 FMNL3Q8IVF7 1028 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 ZNF280CQ8ND82 737 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 ZNF516Q92618 1163 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 RILPQ96NA2 401 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 ELP3Q9H9T3 547 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 PIM2Q9P1W9 311 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 STXBP5LQ9Y2K9 1186 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 PTPRJQ12913 1337 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.22□□□□□ -0.13
GPC1-209ENST00000495100 DHX15O43143 795 aaKnown RBP14.22□□□□□ -0.13
GPC1-209ENST00000495100 DGAT1O75907 488 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 PECAM1P16284 738 aaPredicted RBP14.22□□□□□ -0.13
GPC1-209ENST00000495100 NFX1Q12986 1120 aaKnown RBP14.22□□□□□ -0.13
GPC1-209ENST00000495100 CUL2Q13617 745 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 BMT2Q1RMZ1 405 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 PCNX4Q63HM2 1172 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 MCPH1Q8NEM0 835 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 HELQQ8TDG4 1101 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 ZNF606Q8WXB4 792 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 CPB2Q96IY4 423 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 TRABDQ9H4I3 376 aa14.22□□□□□ -0.13
GPC1-209ENST00000495100 H0YGN5 161 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 M0QYV0 167 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 AVILO75366 819 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 PDGFRBP09619 1106 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 KRT4P19013 534 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 TAF5Q15542 800 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 PPP2R5EQ16537 467 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 C1orf220Q5T0J3 134 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 BORCS6Q96GS4 357 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 MRPL47Q9HD33 250 aaKnown RBP14.21□□□□□ -0.13
GPC1-209ENST00000495100 UBN1Q9NPG3 1134 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 NINJ2Q9NZG7 142 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 SLC12A6Q9UHW9 1150 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 NFS1Q9Y697 457 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 ANKRD36CQ5JPF3 1778 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 RPS6KA5O75582 802 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 CBX6O95503 412 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 DRD4P21917 467 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 CLEC16AQ2KHT3 1053 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 SGSM1Q2NKQ1 1148 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 ACCSLQ4AC99 568 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 NPNTQ6UXI9 565 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 SPATA21Q7Z572 469 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 FBXO16Q8IX29 292 aaPredicted RBP14.21□□□□□ -0.13
GPC1-209ENST00000495100 SHC3Q92529 594 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 CYTH2Q99418 400 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 EFCC1Q9HA90 598 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 TMEM59LQ9UK28 342 aa14.21□□□□□ -0.13
GPC1-209ENST00000495100 ZNF536O15090 1300 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms