RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 BEX3Q00994 111 aa14.99□□□□□ -0.01
PTPN7-216ENST00000492977 TMEM132DQ14C87 1099 aa14.99□□□□□ -0.01
PTPN7-216ENST00000492977 CLUL1Q15846 466 aa14.99□□□□□ -0.01
PTPN7-216ENST00000492977 CATSPER4Q7RTX7 472 aa14.99□□□□□ -0.01
PTPN7-216ENST00000492977 NME8Q8N427 588 aa14.99□□□□□ -0.01
PTPN7-216ENST00000492977 C1orf127Q8N9H9 656 aa14.99□□□□□ -0.01
PTPN7-216ENST00000492977 ZNF564Q8TBZ8 553 aaPredicted RBP14.99□□□□□ -0.01
PTPN7-216ENST00000492977 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.99□□□□□ -0.01
PTPN7-216ENST00000492977 VRTNQ9H8Y1 702 aa14.99□□□□□ -0.01
PTPN7-216ENST00000492977 PLEKHA5Q9HAU0 1116 aa14.99□□□□□ -0.01
PTPN7-216ENST00000492977 OGFRQ9NZT2 677 aa14.99□□□□□ -0.01
PTPN7-216ENST00000492977 SIX4Q9UIU6 781 aa14.99□□□□□ -0.01
PTPN7-216ENST00000492977 TMEM59LQ9UK28 342 aa14.99□□□□□ -0.01
PTPN7-216ENST00000492977 C17orf102A2RUQ5 167 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 KRT19P08727 400 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 HOXC8P31273 242 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 ASPAP45381 313 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 IRX5P78411 483 aaPredicted RBP14.98□□□□□ -0.01
PTPN7-216ENST00000492977 LONRF2Q1L5Z9 754 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 ZNF667Q5HYK9 610 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 BEND6Q5SZJ8 279 aaPredicted RBP14.98□□□□□ -0.01
PTPN7-216ENST00000492977 NAA35Q5VZE5 725 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 NOTUMQ6P988 496 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 SLC27A1Q6PCB7 646 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 RUFY4Q6ZNE9 571 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 PHF13Q86YI8 300 aaPredicted RBP14.98□□□□□ -0.01
PTPN7-216ENST00000492977 UBL4BQ8N7F7 174 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 CXorf38Q8TB03 319 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 ZNF606Q8WXB4 792 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 CPA5Q8WXQ8 436 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 CYFIP2Q96F07 1278 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 ZIC5Q96T25 663 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 LRRC1Q9BTT6 524 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 BCO2Q9BYV7 579 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 WNT8AQ9H1J5 351 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 CARD9Q9H257 536 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 FAM124BQ9H5Z6 455 aaPredicted RBP14.98□□□□□ -0.01
PTPN7-216ENST00000492977 GPBP1L1Q9HC44 474 aaPredicted RBP14.98□□□□□ -0.01
PTPN7-216ENST00000492977 FAM53CQ9NYF3 392 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 ITGA11Q9UKX5 1188 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 DERAQ9Y315 318 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 ATMINO43313 823 aaPredicted RBP14.98□□□□□ -0.01
PTPN7-216ENST00000492977 SEC31AO94979 1220 aaKnown RBP14.98□□□□□ -0.01
PTPN7-216ENST00000492977 LSM8O95777 96 aaKnown RBP14.98□□□□□ -0.01
PTPN7-216ENST00000492977 CYBAP13498 195 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 P4HA1P13674 534 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 EIF4BP23588 611 aaKnown RBP14.98□□□□□ -0.01
PTPN7-216ENST00000492977 GJA9P57773 515 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 TNNC1P63316 161 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 NOMO3P69849 1222 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 LACTBP83111 547 aaPredicted RBP14.98□□□□□ -0.01
PTPN7-216ENST00000492977 TMEM62Q0P6H9 643 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 HIC1Q14526 733 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 MESDQ14696 234 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 PTPROQ16827 1216 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 MAP9Q49MG5 647 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 LIN9Q5TKA1 542 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 MON1BQ7L1V2 547 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 TRPV1Q8NER1 839 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 DNAJB3Q8WWF6 145 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 NAP1L3Q99457 506 aaPredicted RBP14.98□□□□□ -0.01
PTPN7-216ENST00000492977 OSMRQ99650 979 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 CDHR5Q9HBB8 845 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 GINS2Q9Y248 185 aa14.98□□□□□ -0.01
PTPN7-216ENST00000492977 CITO14578 2027 aa14.97□□□□□ -0.01
PTPN7-216ENST00000492977 FAM170AA1A519 330 aa14.97□□□□□ -0.01
PTPN7-216ENST00000492977 CCDC188H7C350 402 aa14.97□□□□□ -0.01
PTPN7-216ENST00000492977 TREHO43280 583 aa14.97□□□□□ -0.01
PTPN7-216ENST00000492977 NPTXRO95502 500 aa14.97□□□□□ -0.01
PTPN7-216ENST00000492977 TBC1D8O95759 1140 aa14.97□□□□□ -0.01
PTPN7-216ENST00000492977 STAU1O95793 577 aaKnown RBP14.97□□□□□ -0.01
PTPN7-216ENST00000492977 ITGB3P05106 788 aa14.97□□□□□ -0.01
PTPN7-216ENST00000492977 WEE2P0C1S8 567 aa14.97□□□□□ -0.01
PTPN7-216ENST00000492977 CD58P19256 250 aa14.97□□□□□ -0.01
PTPN7-216ENST00000492977 COMTP21964 271 aa14.97□□□□□ -0.01
PTPN7-216ENST00000492977 FGFR4P22455 802 aa14.97□□□□□ -0.01
PTPN7-216ENST00000492977 RNASE9P60153 205 aaKnown RBP14.97□□□□□ -0.01
PTPN7-216ENST00000492977 RBP5P82980 135 aa14.97□□□□□ -0.01
PTPN7-216ENST00000492977 WDR72Q3MJ13 1102 aa14.97□□□□□ -0.01
PTPN7-216ENST00000492977 C8orf74Q6P047 294 aa14.97□□□□□ -0.01
PTPN7-216ENST00000492977 CCNI2Q6ZMN8 369 aaPredicted RBP14.97□□□□□ -0.01
PTPN7-216ENST00000492977 C7orf31Q8N865 590 aa14.97□□□□□ -0.01
PTPN7-216ENST00000492977 ZNF518BQ9C0D4 1074 aa14.97□□□□□ -0.01
PTPN7-216ENST00000492977 UPF3AQ9H1J1 476 aaKnown RBP14.97□□□□□ -0.01
PTPN7-216ENST00000492977 CYP3A43Q9HB55 503 aa14.97□□□□□ -0.01
PTPN7-216ENST00000492977 NXF1Q9UBU9 619 aaKnown RBP14.97□□□□□ -0.01
PTPN7-216ENST00000492977 NOC2LQ9Y3T9 749 aaKnown RBP14.97□□□□□ -0.01
PTPN7-216ENST00000492977 KIF3CO14782 793 aa14.96□□□□□ -0.01
PTPN7-216ENST00000492977 PAEPP09466 180 aa14.96□□□□□ -0.01
PTPN7-216ENST00000492977 C6orf222P0C671 652 aaPredicted RBP14.96□□□□□ -0.01
PTPN7-216ENST00000492977 CRYBB1P53674 252 aaPredicted RBP14.96□□□□□ -0.01
PTPN7-216ENST00000492977 NKX3-2P78367 333 aa14.96□□□□□ -0.01
PTPN7-216ENST00000492977 NOGQ13253 232 aa14.96□□□□□ -0.01
PTPN7-216ENST00000492977 SNX17Q15036 470 aa14.96□□□□□ -0.01
PTPN7-216ENST00000492977 TRIB2Q92519 343 aa14.96□□□□□ -0.01
PTPN7-216ENST00000492977 CD101Q93033 1021 aa14.96□□□□□ -0.01
PTPN7-216ENST00000492977 MTG1Q9BT17 334 aaPredicted RBP14.96□□□□□ -0.01
PTPN7-216ENST00000492977 FUT8Q9BYC5 575 aa14.96□□□□□ -0.01
PTPN7-216ENST00000492977 SPC25Q9HBM1 224 aa14.96□□□□□ -0.01
PTPN7-216ENST00000492977 MRPL47Q9HD33 250 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms