RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	CYP11B2	P19099	503 aa		21.1	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	MARCKS	P29966	332 aa	Predicted RBP	21.1	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	IRX6	P78412	446 aa	Predicted RBP	21.1	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	NT5DC1	Q5TFE4	455 aa		21.1	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	TTC8	Q8TAM2	541 aa		21.1	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	RSPRY1	Q96DX4	576 aa		21.1	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	IFT74	Q96LB3	600 aa		21.1	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	GJB4	Q9NTQ9	266 aa		21.1	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	GTSE1	Q9NYZ3	720 aa		21.1	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334		A0A1W2PRU2	124 aa		21.09	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	EXTL3	O43909	919 aa		21.09	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	ATG13	O75143	517 aa		21.09	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	AKAP3	O75969	853 aa		21.09	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	CPB1	P15086	417 aa		21.09	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	GRM5	P41594	1212 aa		21.09	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	PLD1	Q13393	1074 aa		21.09	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	PADI6	Q6TGC4	694 aa		21.09	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	RNF19B	Q6ZMZ0	732 aa		21.09	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	CATSPER3	Q86XQ3	398 aa		21.09	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	ZC3H10	Q96K80	434 aa	Known RBP	21.09	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	SUSD3	Q96L08	255 aa		21.09	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	BRMS1	Q9HCU9	246 aa		21.09	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	TNFSF13B	Q9Y275	285 aa		21.09	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	SPAG17	Q6Q759	2223 aa		21.09	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	FAM205C	A6NFA0	338 aa		21.08	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334		K7ERI5	159 aa		21.08	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	NEMF	O60524	1076 aa		21.08	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	IGF2R	P11717	2491 aa		21.08	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	HOXC13	P31276	330 aa		21.08	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	KRT2	P35908	639 aa		21.08	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	MPL	P40238	635 aa		21.08	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	PXN	P49023	591 aa	Predicted RBP	21.08	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	EPHB3	P54753	998 aa		21.08	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	PLCB2	Q00722	1185 aa		21.08	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	PTPA	Q15257	358 aa		21.08	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	GPIHBP1	Q8IV16	184 aa		21.08	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	OBP2A	Q9NY56	170 aa		21.08	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	TPCN1	Q9ULQ1	816 aa		21.08	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	SLC8A2	Q9UPR5	921 aa		21.08	■□□□□ 0.97
CDK5RAP2-218	ENST00000491334	STK36	Q9NRP7	1315 aa		21.07	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	ARHGEF35	A5YM69	484 aa		21.07	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	KCNE1	P15382	129 aa		21.07	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	NOVA1	P51513	510 aa	Known RBP	21.07	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	OSTN	P61366	133 aa		21.07	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	NR5A1	Q13285	461 aa		21.07	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	WASF1	Q92558	559 aa		21.07	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	DDX12P	Q92771	950 aa		21.07	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	MTMR9	Q96QG7	549 aa		21.07	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	LRRC3	Q9BY71	257 aa		21.07	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	OXCT2	Q9BYC2	517 aa	Predicted RBP	21.07	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	SMOC1	Q9H4F8	434 aa		21.07	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	ASPM	Q8IZT6	3477 aa		21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	TMEM8B	A6NDV4	472 aa		21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	REC8	O95072	547 aa		21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	HOXB3	P14651	431 aa	Predicted RBP	21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	MCM4	P33991	863 aa		21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	ALDH1A3	P47895	512 aa		21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	DAB2IP	Q5VWQ8	1189 aa		21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	CAMKK1	Q8N5S9	505 aa		21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	BEST2	Q8NFU1	509 aa		21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	ZFYVE19	Q96K21	471 aa		21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	ZMAT2	Q96NC0	199 aa	Known RBP	21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	TBC1D32	Q96NH3	1257 aa		21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	ACAP3	Q96P50	834 aa		21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	LRRC3B	Q96PB8	259 aa		21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	TMEM209	Q96SK2	561 aa		21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	POLR3C	Q9BUI4	534 aa	Predicted RBP	21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	KIFC3	Q9BVG8	833 aa		21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	THG1L	Q9NWX6	298 aa	Known RBP	21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	YIPF1	Q9Y548	306 aa		21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	TRIP11	Q15643	1979 aa		21.06	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	MED24	O75448	989 aa		21.05	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	FGF19	O95750	216 aa		21.05	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	ITPRIPL2	Q3MIP1	535 aa		21.05	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	CEP120	Q8N960	986 aa		21.05	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	KIFAP3	Q92845	792 aa		21.05	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	ACO2	Q99798	780 aa	Known RBP	21.05	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	ATXN3L	Q9H3M9	355 aa		21.05	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	PCDHB8	Q9UN66	801 aa		21.05	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	ASB3	Q9Y575	518 aa		21.05	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	RHOBTB1	O94844	696 aa		21.04	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	SCRN1	Q12765	414 aa		21.04	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	GRSF1	Q12849	480 aa	Known RBP eCLIP	21.04	■□□□□ 0.96	1e-7	■□□□□ 8.4
CDK5RAP2-218	ENST00000491334	FOXC1	Q12948	553 aa		21.04	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	ELF2	Q15723	593 aa		21.04	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	ZNF568	Q3ZCX4	644 aa		21.04	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	PLK5	Q496M5	336 aa		21.04	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	ARHGAP15	Q53QZ3	475 aa		21.04	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	SKAP1	Q86WV1	359 aa		21.04	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	TMC8	Q8IU68	726 aa		21.04	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	BPIFB1	Q8TDL5	484 aa		21.04	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	TNFRSF25	Q93038	417 aa		21.04	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	TCHP	Q9BT92	498 aa		21.04	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	TM6SF1	Q9BZW5	370 aa		21.04	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	CDT1	Q9H211	546 aa		21.04	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	PDCD11	Q14690	1871 aa	Known RBP	21.03	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	C4orf47	A7E2U8	309 aa		21.03	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	OAZ2	O95190	189 aa		21.03	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	YWHAH	Q04917	246 aa	Predicted RBP	21.03	■□□□□ 0.96
CDK5RAP2-218	ENST00000491334	TNK2	Q07912	1038 aa		21.03	■□□□□ 0.96

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms