RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 PPP2R5AQ15172 486 aa16.78■□□□□ 0.28
SCAMP3-208ENST00000490999 TPGS2Q68CL5 300 aa16.78■□□□□ 0.28
SCAMP3-208ENST00000490999 PKN3Q6P5Z2 889 aa16.78■□□□□ 0.28
SCAMP3-208ENST00000490999 TMC8Q8IU68 726 aa16.78■□□□□ 0.28
SCAMP3-208ENST00000490999 NECAB1Q8N987 351 aa16.78■□□□□ 0.28
SCAMP3-208ENST00000490999 FAM200AQ8TCP9 573 aa16.78■□□□□ 0.28
SCAMP3-208ENST00000490999 IFT74Q96LB3 600 aa16.78■□□□□ 0.28
SCAMP3-208ENST00000490999 LRRC3BQ96PB8 259 aa16.78■□□□□ 0.28
SCAMP3-208ENST00000490999 TM6SF1Q9BZW5 370 aa16.78■□□□□ 0.28
SCAMP3-208ENST00000490999 CRISPLD1Q9H336 500 aa16.78■□□□□ 0.28
SCAMP3-208ENST00000490999 SLC38A7Q9NVC3 462 aa16.78■□□□□ 0.28
SCAMP3-208ENST00000490999 TNFSF13BQ9Y275 285 aa16.78■□□□□ 0.28
SCAMP3-208ENST00000490999 PHLPP2Q6ZVD8 1323 aa16.77■□□□□ 0.28
SCAMP3-208ENST00000490999 EFNA5P52803 228 aa16.77■□□□□ 0.28
SCAMP3-208ENST00000490999 TNK2Q07912 1038 aa16.77■□□□□ 0.28
SCAMP3-208ENST00000490999 FCHO2Q0JRZ9 810 aa16.77■□□□□ 0.28
SCAMP3-208ENST00000490999 XKR4Q5GH76 650 aa16.77■□□□□ 0.28
SCAMP3-208ENST00000490999 TCEAL6Q6IPX3 200 aa16.77■□□□□ 0.28
SCAMP3-208ENST00000490999 ALKAL1Q6UXT8 129 aa16.77■□□□□ 0.28
SCAMP3-208ENST00000490999 WDR5BQ86VZ2 330 aa16.77■□□□□ 0.28
SCAMP3-208ENST00000490999 DDX1Q92499 740 aaKnown RBP16.77■□□□□ 0.28
SCAMP3-208ENST00000490999 WASF1Q92558 559 aa16.77■□□□□ 0.28
SCAMP3-208ENST00000490999 DDX12PQ92771 950 aa16.77■□□□□ 0.28
SCAMP3-208ENST00000490999 TCEAL3Q969E4 200 aa16.77■□□□□ 0.28
SCAMP3-208ENST00000490999 SUSD3Q96L08 255 aa16.77■□□□□ 0.28
SCAMP3-208ENST00000490999 TBC1D32Q96NH3 1257 aa16.77■□□□□ 0.28
SCAMP3-208ENST00000490999 DNAJC25Q9H1X3 360 aa16.77■□□□□ 0.28
SCAMP3-208ENST00000490999 TIMM13Q9Y5L4 95 aaPredicted RBP16.77■□□□□ 0.28
SCAMP3-208ENST00000490999 MYBPHLA2RUH7 354 aa16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 CHADO15335 359 aa16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 LARGE1O95461 756 aa16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 PRAMEF12O95522 483 aa16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 CDR1P51861 262 aa16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 CCINQ13939 588 aa16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 ECM1Q16610 540 aa16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 SEZ6Q53EL9 994 aa16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 STPG1Q5TH74 334 aa16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 APBB1IPQ7Z5R6 666 aaPredicted RBP16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 KBTBD6Q86V97 674 aa16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 LEMD2Q8NC56 503 aa16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 MSANTD3Q96H12 275 aa16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 ACO2Q99798 780 aaKnown RBP16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 MKNK1Q9BUB5 465 aa16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 POLR3CQ9BUI4 534 aaPredicted RBP16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 TARS2Q9BW92 718 aaKnown RBP16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 LRRC3Q9BY71 257 aa16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 BHMT2Q9H2M3 363 aa16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 C8orf33Q9H7E9 229 aaPredicted RBP16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 POLR3BQ9NW08 1133 aaPredicted RBP16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 CNTN3Q9P232 1028 aa16.76■□□□□ 0.27
SCAMP3-208ENST00000490999 CCDC169A6NNP5 214 aa16.75■□□□□ 0.27
SCAMP3-208ENST00000490999 JAK2O60674 1132 aa16.75■□□□□ 0.27
SCAMP3-208ENST00000490999 RPP40O75818 363 aaKnown RBP16.75■□□□□ 0.27
SCAMP3-208ENST00000490999 SOAT2O75908 522 aa16.75■□□□□ 0.27
SCAMP3-208ENST00000490999 EPN2O95208 641 aa16.75■□□□□ 0.27
SCAMP3-208ENST00000490999 KCNE1P15382 129 aa16.75■□□□□ 0.27
SCAMP3-208ENST00000490999 LIMK1P53667 647 aa16.75■□□□□ 0.27
SCAMP3-208ENST00000490999 PEX3P56589 373 aa16.75■□□□□ 0.27
SCAMP3-208ENST00000490999 SHC2P98077 582 aa16.75■□□□□ 0.27
SCAMP3-208ENST00000490999 SPAG1Q07617 926 aa16.75■□□□□ 0.27
SCAMP3-208ENST00000490999 COL9A2Q14055 689 aaPredicted RBP16.75■□□□□ 0.27
SCAMP3-208ENST00000490999 DGKKQ5KSL6 1271 aa16.75■□□□□ 0.27
SCAMP3-208ENST00000490999 TAS1R3Q7RTX0 852 aa16.75■□□□□ 0.27
SCAMP3-208ENST00000490999 ARID3BQ8IVW6 561 aaPredicted RBP16.75■□□□□ 0.27
SCAMP3-208ENST00000490999 TTC9BQ8N6N2 239 aa16.75■□□□□ 0.27
SCAMP3-208ENST00000490999 SMG9Q9H0W8 520 aaKnown RBP16.75■□□□□ 0.27
SCAMP3-208ENST00000490999 PTPRHQ9HD43 1115 aa16.75■□□□□ 0.27
SCAMP3-208ENST00000490999 ANKFY1Q9P2R3 1169 aa16.75■□□□□ 0.27
SCAMP3-208ENST00000490999 PDCD11Q14690 1871 aaKnown RBP16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 C1QTNF9BB2RNN3 333 aa16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 K7ERI5 159 aa16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 ABLIM1O14639 778 aa16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 TM4SF5O14894 197 aa16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 FOXD2O60548 495 aaPredicted RBP16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 C1QTNF9P0C862 333 aa16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 HOXB3P14651 431 aaPredicted RBP16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 RPA1P27694 616 aa16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 DUSP4Q13115 394 aa16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 PSAPL1Q6NUJ1 521 aa16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 RALGPS2Q86X27 583 aaPredicted RBP16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 APPL2Q8NEU8 664 aa16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 ERMNQ8TAM6 284 aa16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 GAB3Q8WWW8 586 aa16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 KIFAP3Q92845 792 aa16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 ACAP3Q96P50 834 aa16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 MRPL4Q9BYD3 311 aaKnown RBP16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 PCDHB8Q9UN66 801 aa16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 SLC27A5Q9Y2P5 690 aa16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 ANKRD11Q6UB99 2663 aaPredicted RBP16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 SDK1Q7Z5N4 2213 aa16.74■□□□□ 0.27
SCAMP3-208ENST00000490999 TRIP11Q15643 1979 aa16.73■□□□□ 0.27
SCAMP3-208ENST00000490999 KCNK5O95279 499 aa16.73■□□□□ 0.27
SCAMP3-208ENST00000490999 OR52Z1P0C646 297 aa16.73■□□□□ 0.27
SCAMP3-208ENST00000490999 ZNF806P0C7X5 589 aa16.73■□□□□ 0.27
SCAMP3-208ENST00000490999 CCDC192P0DO97 292 aa16.73■□□□□ 0.27
SCAMP3-208ENST00000490999 RPL9P32969 192 aaKnown RBP16.73■□□□□ 0.27
SCAMP3-208ENST00000490999 CCT6AP40227 531 aaKnown RBP16.73■□□□□ 0.27
SCAMP3-208ENST00000490999 MPLP40238 635 aa16.73■□□□□ 0.27
SCAMP3-208ENST00000490999 NPTX2P47972 431 aa16.73■□□□□ 0.27
SCAMP3-208ENST00000490999 MLLT6P55198 1093 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms