RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.38□□□□□ -1.55
CSTF1-205ENST00000490539 FEM1BQ9UK73 627 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 PCDHB4Q9Y5E5 795 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 DDX49Q9Y6V7 483 aaKnown RBP5.38□□□□□ -1.55
CSTF1-205ENST00000490539 MYPNQ86TC9 1320 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 CDK5RAP2Q96SN8 1893 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 CFAP54Q96N23 3096 aa5.38□□□□□ -1.55
CSTF1-205ENST00000490539 CCDC163A0A0D9SF12 145 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 FAM47E-STBD1D6RA91 191 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 ARNTLO00327 626 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 DHX16O60231 1041 aaKnown RBP5.37□□□□□ -1.55
CSTF1-205ENST00000490539 SLC25A27O95847 323 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 GNAT1P11488 350 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 FCER1AP12319 257 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 ATF2P15336 505 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 CAPN2P17655 700 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 BMP7P18075 431 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 GRK2P25098 689 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 GRK3P35626 688 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 MCM2P49736 904 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 MOGSQ13724 837 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 CCDC96Q2M329 555 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 EMC4Q5J8M3 183 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 GPATCH4Q5T3I0 446 aaKnown RBP5.37□□□□□ -1.55
CSTF1-205ENST00000490539 IFIT1BQ5T764 474 aaKnown RBP5.37□□□□□ -1.55
CSTF1-205ENST00000490539 SLFN13Q68D06 897 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 SYNE3Q6ZMZ3 975 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 EP400NLQ6ZTU2 488 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 PLEKHH3Q7Z736 793 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 MTDHQ86UE4 582 aaKnown RBP5.37□□□□□ -1.55
CSTF1-205ENST00000490539 DGKHQ86XP1 1220 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 TMTC2Q8N394 836 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 LINC01356Q8N9X3 169 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 SMARCC2Q8TAQ2 1214 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 UBXN4Q92575 508 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 MPHOSPH6Q99547 160 aaKnown RBP5.37□□□□□ -1.55
CSTF1-205ENST00000490539 SLF1Q9BQI6 1058 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 DHRS4Q9BTZ2 278 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 OSBPL2Q9H1P3 480 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 SMOC1Q9H4F8 434 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 MROH8Q9H579 483 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 PARD6AQ9NPB6 346 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 TCP11L1Q9NUJ3 509 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 MORF4L1Q9UBU8 362 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 SRRDQ9UH36 339 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 FBXO40Q9UH90 709 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 PTPN22Q9Y2R2 807 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 CFAP47Q6ZTR5 3102 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 MAST4O15021 2626 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 ATAD5Q96QE3 1844 aa5.37□□□□□ -1.55
CSTF1-205ENST00000490539 USP34Q70CQ2 3546 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 CHD6Q8TD26 2715 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 CDH23Q9H251 3354 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 A0A1W2PRG0 241 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 TMEM232C9JQI7 657 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 IFIT3O14879 490 aaKnown RBP5.36□□□□□ -1.55
CSTF1-205ENST00000490539 GSTA4O15217 222 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 ADCY3O60266 1144 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 OFD1O75665 1012 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 CYP7B1O75881 506 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 NDUFB10O96000 172 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 GUCY1A2P33402 732 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 MCM5P33992 734 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 RGS2P41220 211 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 MC3RP41968 323 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 GABREP78334 506 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 ZSCAN23Q3MJ62 389 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 FAM83BQ5T0W9 1011 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 YOD1Q5VVQ6 348 aaPredicted RBP5.36□□□□□ -1.55
CSTF1-205ENST00000490539 MFSD14CQ5VZR4 134 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 KCNT2Q6UVM3 1135 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 CATIPQ7Z7H3 387 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 DPP9Q86TI2 863 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 MIB1Q86YT6 1006 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 FAM126BQ8IXS8 530 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 ZSWIM2Q8NEG5 633 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 SHCBP1Q8NEM2 672 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 MAP4K1Q92918 833 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 IL17RAQ96F46 866 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 TOE1Q96GM8 510 aaKnown RBP5.36□□□□□ -1.55
CSTF1-205ENST00000490539 MRFAP1L1Q96HT8 127 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 PDLIM2Q96JY6 352 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 DNAJC7Q99615 494 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 JAM3Q9BX67 310 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 TEX13BQ9BXU2 312 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 R3HDMLQ9H3Y0 253 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 SLC6A20Q9NP91 592 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 MYOTQ9UBF9 498 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.36□□□□□ -1.55
CSTF1-205ENST00000490539 RBM8AQ9Y5S9 174 aaKnown RBP5.36□□□□□ -1.55
CSTF1-205ENST00000490539 PLIN4Q96Q06 1357 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 LAMB1P07942 1786 aa5.36□□□□□ -1.55
CSTF1-205ENST00000490539 FASNP49327 2511 aaKnown RBP5.35□□□□□ -1.55
CSTF1-205ENST00000490539 BLACEA4D250 179 aa5.35□□□□□ -1.55
CSTF1-205ENST00000490539 CCDC69A6NI79 296 aa5.35□□□□□ -1.55
CSTF1-205ENST00000490539 SLC15A5A6NIM6 579 aa5.35□□□□□ -1.55
CSTF1-205ENST00000490539 B4DLN1 442 aa5.35□□□□□ -1.55
CSTF1-205ENST00000490539 B4E1Z4 1266 aa5.35□□□□□ -1.55
CSTF1-205ENST00000490539 VWA5AO00534 786 aa5.35□□□□□ -1.55
CSTF1-205ENST00000490539 EPB41L2O43491 1005 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms