RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 CLCNKBP51801 687 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 PSMC5P62195 406 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 ANO7Q6IWH7 933 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 EXOC8Q8IYI6 725 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 TMEFF1Q8IYR6 380 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 MINDY1Q8N5J2 469 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 ZNF713Q8N859 430 aaPredicted RBP16.64■□□□□ 0.25
UFD1-209ENST00000489406 TCP11Q8WWU5 503 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 CCDC136Q96JN2 1154 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 PRORYQ9H606 182 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 GKN1Q9NS71 199 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 STK24Q9Y6E0 443 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.63■□□□□ 0.25
UFD1-209ENST00000489406 TRABD2BA6NFA1 517 aa16.63■□□□□ 0.25
UFD1-209ENST00000489406 OTOL1A6NHN0 477 aaPredicted RBP16.63■□□□□ 0.25
UFD1-209ENST00000489406 TMEM189-UBE2V1I3L0A0 370 aa16.63■□□□□ 0.25
UFD1-209ENST00000489406 TRAPPC3O43617 180 aa16.63■□□□□ 0.25
UFD1-209ENST00000489406 DRD1P21728 446 aa16.63■□□□□ 0.25
UFD1-209ENST00000489406 RFC5P40937 340 aa16.63■□□□□ 0.25
UFD1-209ENST00000489406 GFPT1Q06210 699 aaPredicted RBP16.63■□□□□ 0.25
UFD1-209ENST00000489406 PSMD2Q13200 908 aa16.63■□□□□ 0.25
UFD1-209ENST00000489406 TPGS2Q68CL5 300 aa16.63■□□□□ 0.25
UFD1-209ENST00000489406 NAIF1Q69YI7 327 aaPredicted RBP16.63■□□□□ 0.25
UFD1-209ENST00000489406 TOGARAM2Q6ZUX3 1019 aa16.63■□□□□ 0.25
UFD1-209ENST00000489406 LPCAT2Q7L5N7 544 aa16.63■□□□□ 0.25
UFD1-209ENST00000489406 SLCO6A1Q86UG4 719 aa16.63■□□□□ 0.25
UFD1-209ENST00000489406 MARCH9Q86YJ5 346 aa16.63■□□□□ 0.25
UFD1-209ENST00000489406 REXO1Q8N1G1 1221 aaKnown RBP16.63■□□□□ 0.25
UFD1-209ENST00000489406 ACDQ96AP0 544 aa16.63■□□□□ 0.25
UFD1-209ENST00000489406 LRRC3Q9BY71 257 aa16.63■□□□□ 0.25
UFD1-209ENST00000489406 POLMQ9NP87 494 aaPredicted RBP16.63■□□□□ 0.25
UFD1-209ENST00000489406 THG1LQ9NWX6 298 aaKnown RBP16.63■□□□□ 0.25
UFD1-209ENST00000489406 OBP2AQ9NY56 170 aa16.63■□□□□ 0.25
UFD1-209ENST00000489406 RCAN3Q9UKA8 241 aa16.63■□□□□ 0.25
UFD1-209ENST00000489406 CIZ1Q9ULV3 898 aaPredicted RBP16.63■□□□□ 0.25
UFD1-209ENST00000489406 SLC6A14Q9UN76 642 aa16.63■□□□□ 0.25
UFD1-209ENST00000489406 APOBEC2Q9Y235 224 aaKnown RBP16.63■□□□□ 0.25
UFD1-209ENST00000489406 A0A1B0GUA9 196 aa16.62■□□□□ 0.25
UFD1-209ENST00000489406 TBX3O15119 743 aa16.62■□□□□ 0.25
UFD1-209ENST00000489406 EDIL3O43854 480 aa16.62■□□□□ 0.25
UFD1-209ENST00000489406 PRAMEF12O95522 483 aa16.62■□□□□ 0.25
UFD1-209ENST00000489406 RUNX3Q13761 415 aa16.62■□□□□ 0.25
UFD1-209ENST00000489406 EMC2Q15006 297 aa16.62■□□□□ 0.25
UFD1-209ENST00000489406 FBXO43Q4G163 708 aa16.62■□□□□ 0.25
UFD1-209ENST00000489406 TTC30AQ86WT1 665 aa16.62■□□□□ 0.25
UFD1-209ENST00000489406 TMC8Q8IU68 726 aa16.62■□□□□ 0.25
UFD1-209ENST00000489406 C3orf58Q8NDZ4 430 aa16.62■□□□□ 0.25
UFD1-209ENST00000489406 RLN3Q8WXF3 142 aa16.62■□□□□ 0.25
UFD1-209ENST00000489406 HPS4Q9NQG7 708 aa16.62■□□□□ 0.25
UFD1-209ENST00000489406 TPCN1Q9ULQ1 816 aa16.62■□□□□ 0.25
UFD1-209ENST00000489406 PTPRBP23467 1997 aa16.61■□□□□ 0.25
UFD1-209ENST00000489406 RECQL4O94761 1208 aa16.61■□□□□ 0.25
UFD1-209ENST00000489406 LIFRP42702 1097 aa16.61■□□□□ 0.25
UFD1-209ENST00000489406 MCM2P49736 904 aa16.61■□□□□ 0.25
UFD1-209ENST00000489406 FUT2Q10981 343 aa16.61■□□□□ 0.25
UFD1-209ENST00000489406 TFDP1Q14186 410 aa16.61■□□□□ 0.25
UFD1-209ENST00000489406 GPR158Q5T848 1215 aa16.61■□□□□ 0.25
UFD1-209ENST00000489406 TRIM68Q6AZZ1 485 aa16.61■□□□□ 0.25
UFD1-209ENST00000489406 B3GNT9Q6UX72 402 aa16.61■□□□□ 0.25
UFD1-209ENST00000489406 RASSF3Q86WH2 238 aa16.61■□□□□ 0.25
UFD1-209ENST00000489406 EZH1Q92800 747 aaPredicted RBP16.61■□□□□ 0.25
UFD1-209ENST00000489406 TMEM87BQ96K49 555 aa16.61■□□□□ 0.25
UFD1-209ENST00000489406 FNBP1Q96RU3 617 aa16.61■□□□□ 0.25
UFD1-209ENST00000489406 MTA3Q9BTC8 594 aa16.61■□□□□ 0.25
UFD1-209ENST00000489406 ATXN3LQ9H3M9 355 aa16.61■□□□□ 0.25
UFD1-209ENST00000489406 EBF3Q9H4W6 596 aa16.61■□□□□ 0.25
UFD1-209ENST00000489406 AFF4Q9UHB7 1163 aaKnown RBP16.61■□□□□ 0.25
UFD1-209ENST00000489406 FBXL5Q9UKA1 691 aa16.61■□□□□ 0.25
UFD1-209ENST00000489406 PILRBQ9UKJ0 227 aa16.61■□□□□ 0.25
UFD1-209ENST00000489406 PTPN13Q12923 2485 aa16.61■□□□□ 0.25
UFD1-209ENST00000489406 ITPKAP23677 461 aa16.6■□□□□ 0.25
UFD1-209ENST00000489406 MCM5P33992 734 aa16.6■□□□□ 0.25
UFD1-209ENST00000489406 MXD4Q14582 209 aaPredicted RBP16.6■□□□□ 0.25
UFD1-209ENST00000489406 UPP1Q16831 310 aa16.6■□□□□ 0.25
UFD1-209ENST00000489406 DUOXA1Q1HG43 343 aa16.6■□□□□ 0.25
UFD1-209ENST00000489406 GLRA4Q5JXX5 417 aa16.6■□□□□ 0.25
UFD1-209ENST00000489406 LYSMD4Q5XG99 296 aa16.6■□□□□ 0.25
UFD1-209ENST00000489406 TMPRSS7Q7RTY8 843 aa16.6■□□□□ 0.25
UFD1-209ENST00000489406 IFNLR1Q8IU57 520 aaPredicted RBP16.6■□□□□ 0.25
UFD1-209ENST00000489406 FRMD1Q8N878 549 aa16.6■□□□□ 0.25
UFD1-209ENST00000489406 CNOT6LQ96LI5 555 aaKnown RBP16.6■□□□□ 0.25
UFD1-209ENST00000489406 FCRL3Q96P31 734 aaPredicted RBP16.6■□□□□ 0.25
UFD1-209ENST00000489406 P2RY13Q9BPV8 354 aa16.6■□□□□ 0.25
UFD1-209ENST00000489406 FAM83CQ9BQN1 747 aa16.6■□□□□ 0.25
UFD1-209ENST00000489406 POLR3CQ9BUI4 534 aaPredicted RBP16.6■□□□□ 0.25
UFD1-209ENST00000489406 LRRC2Q9BYS8 371 aa16.6■□□□□ 0.25
UFD1-209ENST00000489406 SMG9Q9H0W8 520 aaKnown RBP16.6■□□□□ 0.25
UFD1-209ENST00000489406 GOLGA2P5Q9HBQ8 144 aa16.6■□□□□ 0.25
UFD1-209ENST00000489406 C6orf50Q9HD87 102 aa16.6■□□□□ 0.25
UFD1-209ENST00000489406 YIPF1Q9Y548 306 aa16.6■□□□□ 0.25
UFD1-209ENST00000489406 TNRC6BQ9UPQ9 1833 aaKnown RBP16.59■□□□□ 0.25
UFD1-209ENST00000489406 CAPN8A6NHC0 703 aa16.59■□□□□ 0.25
UFD1-209ENST00000489406 H7C4K7 107 aa16.59■□□□□ 0.25
UFD1-209ENST00000489406 QARSP47897 775 aaKnown RBP16.59■□□□□ 0.25
UFD1-209ENST00000489406 AMPD2Q01433 879 aa16.59■□□□□ 0.25
UFD1-209ENST00000489406 CAPSQ13938 189 aa16.59■□□□□ 0.25
UFD1-209ENST00000489406 CTXN3Q4LDR2 81 aa16.59■□□□□ 0.25
UFD1-209ENST00000489406 NAXDQ8IW45 347 aa16.59■□□□□ 0.25
UFD1-209ENST00000489406 MDGA1Q8NFP4 955 aa16.59■□□□□ 0.25
UFD1-209ENST00000489406 MTRQ99707 1265 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms