RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 ROR1Q01973 937 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 MBTD1Q05BQ5 628 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 NAB2Q15742 525 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 PFKFB3Q16875 520 aaPredicted RBP10.17□□□□□ -0.78
SSBP1-212ENST00000489378 UAP1L1Q3KQV9 507 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 C1orf228Q6PIY5 440 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 RALGPS2Q86X27 583 aaPredicted RBP10.17□□□□□ -0.78
SSBP1-212ENST00000489378 YAF2Q8IY57 180 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 SYNPOQ8N3V7 929 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 CEP170P1Q96L14 293 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 C6orf50Q9HD87 102 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 PRDM9Q9NQV7 894 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 GTSE1Q9NYZ3 720 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 WRAP73Q9P2S5 460 aaPredicted RBP10.17□□□□□ -0.78
SSBP1-212ENST00000489378 BACE2Q9Y5Z0 518 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 ZMYM2Q9UBW7 1377 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 GON4LQ3T8J9 2241 aa10.17□□□□□ -0.78
SSBP1-212ENST00000489378 SPAARA0A1B0GVQ0 90 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 PATE3B3GLJ2 98 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 I3L4J1 428 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 EML1O00423 815 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 ASAP2O43150 1006 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 ABLIM3O94929 683 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 MYL4P12829 197 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 TKTP29401 623 aaKnown RBP10.16□□□□□ -0.78
SSBP1-212ENST00000489378 CDC27P30260 824 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 RFC5P40937 340 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 NCBP1Q09161 790 aaKnown RBP10.16□□□□□ -0.78
SSBP1-212ENST00000489378 FCHO2Q0JRZ9 810 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 EMC2Q15006 297 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 PCBP1Q15365 356 aaKnown RBP eCLIP10.16□□□□□ -0.78
SSBP1-212ENST00000489378 TEAD2Q15562 447 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 ELF2Q15723 593 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 CYP4A22Q5TCH4 519 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 CD300LGQ6UXG3 332 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 SYNE3Q6ZMZ3 975 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 ZNF461Q8TAF7 563 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 FAM200AQ8TCP9 573 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 RUFY2Q8WXA3 655 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 ZFYVE19Q96K21 471 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 LRRC3BQ96PB8 259 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 CYP4F11Q9HBI6 524 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 CEP72Q9P209 647 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 SLC8A2Q9UPR5 921 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 INSL5Q9Y5Q6 135 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 KHNYNO15037 678 aaKnown RBP10.16□□□□□ -0.78
SSBP1-212ENST00000489378 SGSM2O43147 1006 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 ZBTB43O43298 467 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 RHOBTB1O94844 696 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 ELF1P32519 619 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 SLC8B1Q6J4K2 584 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 SLC27A1Q6PCB7 646 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 RNF19BQ6ZMZ0 732 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 SHKBP1Q8TBC3 707 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 ASAP3Q8TDY4 903 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 TCP11Q8WWU5 503 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 HHIPQ96QV1 700 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 CACNA2D2Q9NY47 1150 aa10.16□□□□□ -0.78
SSBP1-212ENST00000489378 THADAQ6YHU6 1953 aa10.15□□□□□ -0.78
SSBP1-212ENST00000489378 A0A1B0GUA9 196 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 EIF4E1BA6NMX2 242 aaKnown RBP10.15□□□□□ -0.79
SSBP1-212ENST00000489378 ST8SIA5O15466 376 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 B3GAT3O94766 335 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 TDP2O95551 362 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 PRKCBP05771 671 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 THP07101 528 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 QARSP47897 775 aaKnown RBP10.15□□□□□ -0.79
SSBP1-212ENST00000489378 USP11P51784 963 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 ARPP19P56211 112 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 IRX4P78413 519 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 SIM1P81133 766 aaPredicted RBP10.15□□□□□ -0.79
SSBP1-212ENST00000489378 TNK2Q07912 1038 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 CAPSQ13938 189 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 Q4G0T1 1027 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 ANKS3Q6ZW76 656 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 TCEAL8Q8IYN2 117 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 CHCHD4Q8N4Q1 142 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 ETNPPLQ8TBG4 499 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 HNRNPLLQ8WVV9 542 aaKnown RBP10.15□□□□□ -0.79
SSBP1-212ENST00000489378 MKNK1Q9BUB5 465 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 SLITRK6Q9H5Y7 841 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 XPNPEP1Q9NQW7 623 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 TOR4AQ9NXH8 423 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 INVSQ9Y283 1065 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 ARID2Q68CP9 1835 aa10.15□□□□□ -0.79
SSBP1-212ENST00000489378 TENM4Q6N022 2769 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 FAM221BA6H8Z2 402 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 GOLGA8AA7E2F4 631 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 GOLGA8BA8MQT2 603 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 TMEM189-UBE2V1I3L0A0 370 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 SLC27A2O14975 620 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 ZBTB39O15060 712 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 MEFVO15553 781 aaPredicted RBP10.14□□□□□ -0.79
SSBP1-212ENST00000489378 IGHDP01880 384 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 ATF2P15336 505 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 GNA11P29992 359 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 BRCC3P46736 316 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 EPHA5P54756 1037 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 SCAPQ12770 1279 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 MSS51Q4VC12 460 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms