RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 SRBD1Q8N5C6 995 aaKnown RBP9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 USP33Q8TEY7 942 aa9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 PIGSQ96S52 555 aa9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 MPHOSPH6Q99547 160 aaKnown RBP9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 ZFYVE21Q9BQ24 234 aa9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 PHF20Q9BVI0 1012 aa9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 MAF1Q9H063 256 aa9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 GPR27Q9NS67 375 aa9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 TMEFF2Q9UIK5 374 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 GPR160Q9UJ42 338 aa9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 RIPK3Q9Y572 518 aa9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 PCDHA1Q9Y5I3 950 aa9.16□□□□□ -0.94
TRAPPC12-221ENST00000489032 PTPDC1A2A3K4 754 aa9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 B4DLN1 442 aa9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 PPP1R12AO14974 1030 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 CYTH3O43739 400 aa9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 HOXC6P09630 235 aa9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 MRPL12P52815 198 aaKnown RBP9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 EPHB4P54760 987 aa9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 RPL11P62913 178 aaKnown RBP9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 FPGSQ05932 587 aa9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 STK3Q13188 491 aa9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 HSF5Q4G112 596 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 FNDC3BQ53EP0 1204 aaKnown RBP9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 PLEKHG4Q58EX7 1191 aa9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 GJC2Q5T442 439 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 RNF207Q6ZRF8 634 aa9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 NOL8Q76FK4 1167 aaKnown RBP9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 MTDHQ86UE4 582 aaKnown RBP9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 MTMR8Q96EF0 704 aa9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 JMJD8Q96S16 334 aa9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 ADD3Q9UEY8 706 aaKnown RBP9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 EBF1Q9UH73 591 aa9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 CTNND2Q9UQB3 1225 aa9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 PCDHA2Q9Y5H9 948 aa9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 TIMM13Q9Y5L4 95 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC12-221ENST00000489032 PLXNA1Q9UIW2 1896 aa9.15□□□□□ -0.95
TRAPPC12-221ENST00000489032 NID2Q14112 1375 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 C7orf72A4D263 438 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 hCG_1984214I3L0E3 225 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 BIN1O00499 593 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 NRDCO43847 1150 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 PFKFB2O60825 505 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 HPXP02790 462 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 PGK2P07205 417 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 CALML3P27482 149 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 MCM2P49736 904 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 TFF2Q03403 129 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 BECN1Q14457 450 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 NR0B2Q15466 257 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 NTRK3Q16288 839 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 MUM1L1Q5H9M0 696 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 DENND5AQ6IQ26 1287 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 KCNT2Q6UVM3 1135 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 HEATR3Q7Z4Q2 680 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 SLCO6A1Q86UG4 719 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 SAMD3Q8N6K7 520 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 ZNF713Q8N859 430 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 NUP43Q8NFH3 380 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 ABHD4Q8TB40 342 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 CCDC12Q8WUD4 166 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 CUL5Q93034 780 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 ZSCAN31Q96LW9 406 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 A1CFQ9NQ94 594 aaKnown RBP9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 MAP3K20Q9NYL2 800 aaKnown RBP9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 LIMCH1Q9UPQ0 1083 aa9.14□□□□□ -0.95
TRAPPC12-221ENST00000489032 MYH6P13533 1939 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 ASB14A6NK59 587 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 GCOM1H8Y6P7 765 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 NFIBO00712 420 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 PRPF3O43395 683 aaKnown RBP9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 CFBP00751 764 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 CLTBP09497 229 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 POLR2MP0CAP2 368 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 IFNAR1P17181 557 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 PRKCAP17252 672 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 ITGB8P26012 769 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 ARL4AP40617 200 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 KCNQ1P51787 676 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 ERVFC1P60507 584 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 TLE2Q04725 743 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 BAATQ14032 418 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 TESK1Q15569 626 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 INF2Q27J81 1249 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 OLFML2BQ68BL8 750 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 CCDC103Q8IW40 242 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 MSL3Q8N5Y2 521 aaKnown RBP9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 RCBTB1Q8NDN9 531 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 CLEC4DQ8WXI8 215 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 MAML3Q96JK9 1138 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 MAGEB10Q96LZ2 347 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 ALG1Q9BT22 464 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 SLC26A6Q9BXS9 759 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 RNF26Q9BY78 433 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 GLT8D2Q9H1C3 349 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 CYP39A1Q9NYL5 469 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 IMPACTQ9P2X3 320 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 TPCN1Q9ULQ1 816 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 TRAF6Q9Y4K3 522 aa9.13□□□□□ -0.95
TRAPPC12-221ENST00000489032 NPFFR2Q9Y5X5 522 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms