RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 GPR182O15218 404 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 BUB1O43683 1085 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 RPS6KA5O75582 802 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 STAU1O95793 577 aaKnown RBP7.54□□□□□ -1.2
SF3A3-206ENST00000487062 ITGB3P05106 788 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 MMEP08473 750 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 NFICP08651 508 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 ACO1P21399 889 aaKnown RBP7.54□□□□□ -1.2
SF3A3-206ENST00000487062 ACLYP53396 1101 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 TUBB4BP68371 445 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 RBP5P82980 135 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 CAP1Q01518 475 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 PDE4CQ08493 712 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 MYO1EQ12965 1108 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 PTK7Q13308 1070 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 PTGISQ16647 500 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 WHAMMP3Q1A5X7 153 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 TAF3Q5VWG9 929 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 PAPD7Q5XG87 772 aaKnown RBP7.54□□□□□ -1.2
SF3A3-206ENST00000487062 TWF2Q6IBS0 349 aaKnown RBP7.54□□□□□ -1.2
SF3A3-206ENST00000487062 TMEM270Q6UE05 265 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 SLC47A2Q86VL8 602 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 C1orf127Q8N9H9 656 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 RBBP8NLQ8NC74 664 aaPredicted RBP7.54□□□□□ -1.2
SF3A3-206ENST00000487062 SLC20A1Q8WUM9 679 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 UBE2Q2Q8WVN8 375 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 TRIM11Q96F44 468 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 FAM84AQ96KN4 292 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 SNX27Q96L92 541 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 PACSIN1Q9BY11 444 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 SEZ6LQ9BYH1 1024 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 DNAI2Q9GZS0 605 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 ISCUQ9H1K1 167 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 FAM124BQ9H5Z6 455 aaPredicted RBP7.54□□□□□ -1.2
SF3A3-206ENST00000487062 VRTNQ9H8Y1 702 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 CYP3A43Q9HB55 503 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 APOBEC3GQ9HC16 384 aaKnown RBP7.54□□□□□ -1.2
SF3A3-206ENST00000487062 CHST12Q9NRB3 414 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 DPP3Q9NY33 737 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 UBQLN1Q9UMX0 589 aaKnown RBP7.54□□□□□ -1.2
SF3A3-206ENST00000487062 CNTN6Q9UQ52 1028 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 NOC2LQ9Y3T9 749 aaKnown RBP7.54□□□□□ -1.2
SF3A3-206ENST00000487062 MRFAP1Q9Y605 127 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 SAR1BQ9Y6B6 198 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 NCANO14594 1321 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 UMODL1Q5DID0 1318 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 KBTBD13C9JR72 458 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 TLR3O15455 904 aaKnown RBP7.53□□□□□ -1.2
SF3A3-206ENST00000487062 CTIFO43310 598 aaKnown RBP7.53□□□□□ -1.2
SF3A3-206ENST00000487062 THAP12O43422 761 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 CAND2O75155 1236 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 RECQL4O94761 1208 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 CD4P01730 458 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 FTLP02792 175 aaPredicted RBP7.53□□□□□ -1.2
SF3A3-206ENST00000487062 ATP1A1P05023 1023 aaKnown RBP7.53□□□□□ -1.2
SF3A3-206ENST00000487062 PRLRP16471 622 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 ZSCAN20P17040 1043 aaPredicted RBP7.53□□□□□ -1.2
SF3A3-206ENST00000487062 ATF7P17544 494 aaPredicted RBP7.53□□□□□ -1.2
SF3A3-206ENST00000487062 CHRNB2P17787 502 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 TCP1P17987 556 aaKnown RBP7.53□□□□□ -1.2
SF3A3-206ENST00000487062 GNA15P30679 374 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 POLR2BP30876 1174 aaKnown RBP7.53□□□□□ -1.2
SF3A3-206ENST00000487062 THPOP40225 353 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 TNNC1P63316 161 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 GPC5P78333 572 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 FMO1Q01740 532 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 CKAP4Q07065 602 aaKnown RBP7.53□□□□□ -1.2
SF3A3-206ENST00000487062 CLEC16AQ2KHT3 1053 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 WDR72Q3MJ13 1102 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 ACAD10Q6JQN1 1059 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 FAM228AQ86W67 206 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 RHOT2Q8IXI1 618 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 UBR7Q8N806 425 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 OLIG1Q8TAK6 271 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 TMEM40Q8WWA1 233 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 RFFLQ8WZ73 363 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 ELMO3Q96BJ8 720 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 HPDLQ96IR7 371 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 CARD6Q9BX69 1037 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 EIF2AQ9BY44 585 aaKnown RBP7.53□□□□□ -1.2
SF3A3-206ENST00000487062 BCO2Q9BYV7 579 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 SENP6Q9GZR1 1112 aaPredicted RBP7.53□□□□□ -1.2
SF3A3-206ENST00000487062 XYLT2Q9H1B5 865 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 CISHQ9NSE2 258 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 CNTN3Q9P232 1028 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 NXF1Q9UBU9 619 aaKnown RBP7.53□□□□□ -1.2
SF3A3-206ENST00000487062 PARP2Q9UGN5 583 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 SIX4Q9UIU6 781 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 AGAP1Q9UPQ3 857 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 HYOU1Q9Y4L1 999 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 TRIM17Q9Y577 477 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 PCDHGC5Q9Y5F6 944 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.53□□□□□ -1.2
SF3A3-206ENST00000487062 SQORQ9Y6N5 450 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 CAPN6Q9Y6Q1 641 aa7.53□□□□□ -1.2
SF3A3-206ENST00000487062 A0A0U1RQG5 324 aaPredicted RBP7.52□□□□□ -1.21
SF3A3-206ENST00000487062 EFCAB8A8MWE9 144 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 ENC1O14682 589 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 FANCGO15287 622 aa7.52□□□□□ -1.21
SF3A3-206ENST00000487062 MED7O43513 233 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms