RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 DSG3P32926 999 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 WNT7BP56706 349 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 SPARCL1Q14515 664 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 BBS9Q3SYG4 887 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 CCNJLQ8IV13 435 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 SHKBP1Q8TBC3 707 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 TEKT4Q8WW24 435 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 DNAJC9Q8WXX5 260 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 RAB3IPQ96QF0 476 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-211ENST00000486901 ACCSQ96QU6 501 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 KCNH7Q9NS40 1196 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 PI4KBQ9UBF8 816 aa13.11□□□□□ -0.31
HSPG2-211ENST00000486901 XIRP1Q702N8 1843 aaKnown RBP13.11□□□□□ -0.31
HSPG2-211ENST00000486901 HNRNPDLO14979 420 aaKnown RBP13.1□□□□□ -0.31
HSPG2-211ENST00000486901 FOSP01100 380 aaPredicted RBP13.1□□□□□ -0.31
HSPG2-211ENST00000486901 ANXA13P27216 316 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 CNGA1P29973 690 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 GRIK3Q13003 919 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 ACAD10Q6JQN1 1059 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 DPH6Q7L8W6 267 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 VPS52Q8N1B4 723 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 HELQQ8TDG4 1101 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 WDR60Q8WVS4 1066 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 GINM1Q9NU53 330 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 RAB20Q9NX57 234 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.1□□□□□ -0.31
HSPG2-211ENST00000486901 ARFGEF1Q9Y6D6 1849 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 TESPA1A2RU30 521 aaPredicted RBP13.1□□□□□ -0.31
HSPG2-211ENST00000486901 LRRD1A4D1F6 860 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 CAPN9O14815 690 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 TBX3O15119 743 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 TLR3O15455 904 aaKnown RBP13.1□□□□□ -0.31
HSPG2-211ENST00000486901 GCAP28676 217 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 SERPINB3P29508 390 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 ORC1Q13415 861 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 CDCA2Q69YH5 1023 aaPredicted RBP13.1□□□□□ -0.31
HSPG2-211ENST00000486901 MFSD7Q6UXD7 560 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 FBXO27Q8NI29 283 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 RNF217Q8TC41 542 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 MAML1Q92585 1016 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 MCUR1Q96AQ8 359 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 ZWILCHQ9H900 591 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 NMRK1Q9NWW6 199 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 CYP39A1Q9NYL5 469 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 USH1CQ9Y6N9 552 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 CNTNAP4Q9C0A0 1308 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 F8VP50 259 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 PIK3R2O00459 728 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 ASMTLO95671 621 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 ALDH3A1P30838 453 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 CETN2P41208 172 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 TRABD2AQ86V40 505 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 EFCAB3Q8N7B9 438 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 DCAF4Q8WV16 495 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 TTC1Q99614 292 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 PLVAPQ9BX97 442 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 COL20A1Q9P218 1284 aa13.1□□□□□ -0.31
HSPG2-211ENST00000486901 UMODL1Q5DID0 1318 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 ATP9AO75110 1047 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 RAD17O75943 681 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 USP1O94782 785 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 KRT1P04264 644 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 CYP1A2P05177 515 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 ETS2P15036 469 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 KDSRQ06136 332 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 CYP1B1Q16678 543 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 CYP4A22Q5TCH4 519 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 KRT39Q6A163 491 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 PPP1R21Q6ZMI0 780 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 TCP10LQ8TDR4 215 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 ZNF75CPQ92670 426 aaPredicted RBP13.09□□□□□ -0.31
HSPG2-211ENST00000486901 DDX27Q96GQ7 796 aaKnown RBP13.09□□□□□ -0.31
HSPG2-211ENST00000486901 C2CD2Q9Y426 696 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 FAM155BO75949 473 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 INHBEP58166 350 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 ANKRD22Q5VYY1 191 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 AP1ARQ63HQ0 302 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 LMNTD2Q8IXW0 634 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 MCOLN2Q8IZK6 566 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 SHC3Q92529 594 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 MECRQ9BV79 373 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 TMEM109Q9BVC6 243 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 CDCA7Q9BWT1 371 aaPredicted RBP13.09□□□□□ -0.31
HSPG2-211ENST00000486901 TUFT1Q9NNX1 390 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 BATF3Q9NR55 127 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 RARRES1P49788 294 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 MSS51Q4VC12 460 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 SNX30Q5VWJ9 437 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 RHPN2Q8IUC4 686 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 FBXL13Q8NEE6 735 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 BSNDQ8WZ55 320 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 CNKSR1Q969H4 720 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 CCDC17Q96LX7 622 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 ANKFY1Q9P2R3 1169 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 IVNS1ABPQ9Y6Y0 642 aa13.09□□□□□ -0.31
HSPG2-211ENST00000486901 GYG2O15488 501 aa13.08□□□□□ -0.32
HSPG2-211ENST00000486901 GRIN3BO60391 1043 aa13.08□□□□□ -0.32
HSPG2-211ENST00000486901 YWHABP31946 246 aaKnown RBP13.08□□□□□ -0.32
HSPG2-211ENST00000486901 THOC5Q13769 683 aaKnown RBP13.08□□□□□ -0.32
HSPG2-211ENST00000486901 PTK6Q13882 451 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms