RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 C5AR1P21730 350 aa5.39□□□□□ -1.55
GCFC2-209ENST00000486016 EDNRBP24530 442 aa5.39□□□□□ -1.55
GCFC2-209ENST00000486016 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
GCFC2-209ENST00000486016 DYRK1AQ13627 763 aa5.39□□□□□ -1.55
GCFC2-209ENST00000486016 PTPRRQ15256 657 aa5.39□□□□□ -1.55
GCFC2-209ENST00000486016 UTP14CQ5TAP6 766 aaKnown RBP5.39□□□□□ -1.55
GCFC2-209ENST00000486016 CLNKQ7Z7G1 428 aa5.39□□□□□ -1.55
GCFC2-209ENST00000486016 PEG10Q86TG7 708 aaKnown RBP5.39□□□□□ -1.55
GCFC2-209ENST00000486016 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.39□□□□□ -1.55
GCFC2-209ENST00000486016 SLC30A5Q8TAD4 765 aa5.39□□□□□ -1.55
GCFC2-209ENST00000486016 SARAFQ96BY9 339 aa5.39□□□□□ -1.55
GCFC2-209ENST00000486016 LIMCH1Q9UPQ0 1083 aa5.39□□□□□ -1.55
GCFC2-209ENST00000486016 WDR27A2RRH5 827 aa5.38□□□□□ -1.55
GCFC2-209ENST00000486016 DNAJC9-AS1A6NH13 148 aa5.38□□□□□ -1.55
GCFC2-209ENST00000486016 PCDHGA12O60330 932 aa5.38□□□□□ -1.55
GCFC2-209ENST00000486016 GRIA3P42263 894 aa5.38□□□□□ -1.55
GCFC2-209ENST00000486016 HNRNPMP52272 730 aaKnown RBP eCLIP5.38□□□□□ -1.55
GCFC2-209ENST00000486016 ZNF280AP59817 542 aaPredicted RBP5.38□□□□□ -1.55
GCFC2-209ENST00000486016 RPS7P62081 194 aaKnown RBP5.38□□□□□ -1.55
GCFC2-209ENST00000486016 NBPF8Q3BBV2 869 aa5.38□□□□□ -1.55
GCFC2-209ENST00000486016 CD300EQ496F6 205 aaPredicted RBP5.38□□□□□ -1.55
GCFC2-209ENST00000486016 KAZNQ674X7 775 aa5.38□□□□□ -1.55
GCFC2-209ENST00000486016 TSHZ1Q6ZSZ6 1077 aa5.38□□□□□ -1.55
GCFC2-209ENST00000486016 MICALCLQ6ZW33 695 aa5.38□□□□□ -1.55
GCFC2-209ENST00000486016 CNTD1Q8N815 330 aa5.38□□□□□ -1.55
GCFC2-209ENST00000486016 C1orf162Q8NEQ5 155 aaPredicted RBP5.38□□□□□ -1.55
GCFC2-209ENST00000486016 TMEM125Q96AQ2 219 aa5.38□□□□□ -1.55
GCFC2-209ENST00000486016 TMX3Q96JJ7 454 aa5.38□□□□□ -1.55
GCFC2-209ENST00000486016 HEPHQ9BQS7 1158 aa5.38□□□□□ -1.55
GCFC2-209ENST00000486016 TDP1Q9NUW8 608 aa5.38□□□□□ -1.55
GCFC2-209ENST00000486016 SLC45A2Q9UMX9 530 aa5.38□□□□□ -1.55
GCFC2-209ENST00000486016 PCDHGA9Q9Y5G4 932 aaKnown RBP5.38□□□□□ -1.55
GCFC2-209ENST00000486016 PCDHGA8Q9Y5G5 932 aa5.38□□□□□ -1.55
GCFC2-209ENST00000486016 PCDHGA7Q9Y5G6 932 aa5.38□□□□□ -1.55
GCFC2-209ENST00000486016 PCDHGA6Q9Y5G7 932 aa5.38□□□□□ -1.55
GCFC2-209ENST00000486016 PCDHGA3Q9Y5H0 932 aa5.38□□□□□ -1.55
GCFC2-209ENST00000486016 CCDC151A5D8V7 595 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 ADM5C9JUS6 153 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 FZD9O00144 591 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 HTRA2O43464 458 aaPredicted RBP5.37□□□□□ -1.55
GCFC2-209ENST00000486016 CNGA1P29973 690 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 ANXA11P50995 505 aaKnown RBP5.37□□□□□ -1.55
GCFC2-209ENST00000486016 MC2RQ01718 297 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 TLE1Q04724 770 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 FPGSQ05932 587 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 ATP2B3Q16720 1220 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 ZNF365Q70YC5 407 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 C1QL2Q7Z5L3 287 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 GRASPQ7Z6J2 395 aaPredicted RBP5.37□□□□□ -1.55
GCFC2-209ENST00000486016 AMOTL1Q8IY63 956 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 ADGRG5Q8IZF4 528 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 CFAP52Q8N1V2 620 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 ATL2Q8NHH9 583 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 TFAP2BQ92481 460 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 DPF1Q92782 380 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 PUS7LQ9H0K6 701 aaKnown RBP5.37□□□□□ -1.55
GCFC2-209ENST00000486016 KMT5AQ9NQR1 393 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 CDYLQ9Y232 598 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 NEU2Q9Y3R4 380 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 PRKAB1Q9Y478 270 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 PCDHB1Q9Y5F3 818 aa5.37□□□□□ -1.55
GCFC2-209ENST00000486016 KAT6AQ92794 2004 aa5.36□□□□□ -1.55
GCFC2-209ENST00000486016 VWC2LB2RUY7 222 aa5.36□□□□□ -1.55
GCFC2-209ENST00000486016 IARSP41252 1262 aaKnown RBP5.36□□□□□ -1.55
GCFC2-209ENST00000486016 POU6F2P78424 691 aaPredicted RBP5.36□□□□□ -1.55
GCFC2-209ENST00000486016 IL10RAQ13651 578 aa5.36□□□□□ -1.55
GCFC2-209ENST00000486016 TXNRD1Q16881 649 aa5.36□□□□□ -1.55
GCFC2-209ENST00000486016 C3orf36Q3SXR2 165 aa5.36□□□□□ -1.55
GCFC2-209ENST00000486016 EGFLAMQ63HQ2 1017 aa5.36□□□□□ -1.55
GCFC2-209ENST00000486016 KRTAP5-11Q6L8G4 156 aa5.36□□□□□ -1.55
GCFC2-209ENST00000486016 DDX42Q86XP3 938 aaKnown RBP eCLIP5.36□□□□□ -1.55
GCFC2-209ENST00000486016 TMIEQ8NEW7 156 aa5.36□□□□□ -1.55
GCFC2-209ENST00000486016 HDAC10Q969S8 669 aa5.36□□□□□ -1.55
GCFC2-209ENST00000486016 PGBD1Q96JS3 809 aa5.36□□□□□ -1.55
GCFC2-209ENST00000486016 ADAM21Q9UKJ8 722 aa5.36□□□□□ -1.55
GCFC2-209ENST00000486016 AOX1Q06278 1338 aa5.36□□□□□ -1.55
GCFC2-209ENST00000486016 CCDC195A0A1B0GUA6 201 aa5.35□□□□□ -1.55
GCFC2-209ENST00000486016 E7ENX8 843 aa5.35□□□□□ -1.55
GCFC2-209ENST00000486016 E9PLN8 166 aa5.35□□□□□ -1.55
GCFC2-209ENST00000486016 TAP2Q03519 686 aa5.35□□□□□ -1.55
GCFC2-209ENST00000486016 ZNF844Q08AG5 666 aa5.35□□□□□ -1.55
GCFC2-209ENST00000486016 HLXQ14774 488 aaPredicted RBP5.35□□□□□ -1.55
GCFC2-209ENST00000486016 RAB39AQ14964 217 aa5.35□□□□□ -1.55
GCFC2-209ENST00000486016 RSPH3Q86UC2 560 aa5.35□□□□□ -1.55
GCFC2-209ENST00000486016 PDPRQ8NCN5 879 aa5.35□□□□□ -1.55
GCFC2-209ENST00000486016 NSUN7Q8NE18 718 aaKnown RBP5.35□□□□□ -1.55
GCFC2-209ENST00000486016 MYCBPAPQ8TBZ2 947 aa5.35□□□□□ -1.55
GCFC2-209ENST00000486016 FBXL20Q96IG2 436 aa5.35□□□□□ -1.55
GCFC2-209ENST00000486016 FAXDC2Q96IV6 333 aa5.35□□□□□ -1.55
GCFC2-209ENST00000486016 VKORC1Q9BQB6 163 aa5.35□□□□□ -1.55
GCFC2-209ENST00000486016 C1QTNF7Q9BXJ2 289 aa5.35□□□□□ -1.55
GCFC2-209ENST00000486016 SLC5A4Q9NY91 659 aa5.35□□□□□ -1.55
GCFC2-209ENST00000486016 CALCOCO1Q9P1Z2 691 aa5.35□□□□□ -1.55
GCFC2-209ENST00000486016 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.35□□□□□ -1.55
GCFC2-209ENST00000486016 SAP30BPQ9UHR5 308 aaKnown RBP5.35□□□□□ -1.55
GCFC2-209ENST00000486016 LPOP22079 712 aaPredicted RBP5.34□□□□□ -1.55
GCFC2-209ENST00000486016 SOX10P56693 466 aa5.34□□□□□ -1.55
GCFC2-209ENST00000486016 AKNAD1Q5T1N1 836 aa5.34□□□□□ -1.55
GCFC2-209ENST00000486016 LCE1AQ5T7P2 110 aa5.34□□□□□ -1.55
GCFC2-209ENST00000486016 PGM2L1Q6PCE3 622 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms