RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	SLC30A5	Q8TAD4	765 aa		4.42	□□□□□ -1.7
CCNL1-223	ENST00000481173	NUP133	Q8WUM0	1156 aa		4.42	□□□□□ -1.7
CCNL1-223	ENST00000481173	SLC5A4	Q9NY91	659 aa		4.42	□□□□□ -1.7
CCNL1-223	ENST00000481173	ADAM21	Q9UKJ8	722 aa		4.42	□□□□□ -1.7
CCNL1-223	ENST00000481173	WNT6	Q9Y6F9	365 aa		4.42	□□□□□ -1.7
CCNL1-223	ENST00000481173	AOX1	Q06278	1338 aa		4.42	□□□□□ -1.7
CCNL1-223	ENST00000481173	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.42	□□□□□ -1.7
CCNL1-223	ENST00000481173	CCDC151	A5D8V7	595 aa		4.41	□□□□□ -1.7
CCNL1-223	ENST00000481173	LINC00473	A8K010	186 aa		4.41	□□□□□ -1.7
CCNL1-223	ENST00000481173	ADM5	C9JUS6	153 aa		4.41	□□□□□ -1.7
CCNL1-223	ENST00000481173	KIAA0391	O15091	583 aa	Known RBP	4.41	□□□□□ -1.7
CCNL1-223	ENST00000481173	MPPED1	O15442	326 aa		4.41	□□□□□ -1.7
CCNL1-223	ENST00000481173	CHRM2	P08172	466 aa		4.41	□□□□□ -1.7
CCNL1-223	ENST00000481173	DDC	P20711	480 aa		4.41	□□□□□ -1.7
CCNL1-223	ENST00000481173	MTM1	Q13496	603 aa		4.41	□□□□□ -1.7
CCNL1-223	ENST00000481173	GJC2	Q5T442	439 aa	Predicted RBP	4.41	□□□□□ -1.7
CCNL1-223	ENST00000481173	AMOTL1	Q8IY63	956 aa		4.41	□□□□□ -1.7
CCNL1-223	ENST00000481173	CASKIN2	Q8WXE0	1202 aa		4.41	□□□□□ -1.7
CCNL1-223	ENST00000481173	LPIN2	Q92539	896 aa		4.41	□□□□□ -1.7
CCNL1-223	ENST00000481173	MED15	Q96RN5	788 aa		4.41	□□□□□ -1.7
CCNL1-223	ENST00000481173	C7orf25	Q9BPX7	421 aa		4.41	□□□□□ -1.7
CCNL1-223	ENST00000481173	ZNF277	Q9NRM2	450 aa	Predicted RBP	4.41	□□□□□ -1.7
CCNL1-223	ENST00000481173	FAM171A2	A8MVW0	826 aa		4.4	□□□□□ -1.71
CCNL1-223	ENST00000481173	SRGN	P10124	158 aa		4.4	□□□□□ -1.71
CCNL1-223	ENST00000481173	ALAS1	P13196	640 aa		4.4	□□□□□ -1.71
CCNL1-223	ENST00000481173	GATA3	P23771	443 aa		4.4	□□□□□ -1.71
CCNL1-223	ENST00000481173	IARS	P41252	1262 aa	Known RBP	4.4	□□□□□ -1.71
CCNL1-223	ENST00000481173	EIF2B5	Q13144	721 aa	Known RBP	4.4	□□□□□ -1.71
CCNL1-223	ENST00000481173	KLF9	Q13886	244 aa	Predicted RBP	4.4	□□□□□ -1.71
CCNL1-223	ENST00000481173	ACAP2	Q15057	778 aa		4.4	□□□□□ -1.71
CCNL1-223	ENST00000481173	TMEM119	Q4V9L6	283 aa		4.4	□□□□□ -1.71
CCNL1-223	ENST00000481173	ZNF626	Q68DY1	528 aa		4.4	□□□□□ -1.71
CCNL1-223	ENST00000481173	WASF1	Q92558	559 aa		4.4	□□□□□ -1.71
CCNL1-223	ENST00000481173	CYFIP2	Q96F07	1278 aa		4.4	□□□□□ -1.71
CCNL1-223	ENST00000481173	MANSC1	Q9H8J5	431 aa		4.4	□□□□□ -1.71
CCNL1-223	ENST00000481173	INTS13	Q9NVM9	706 aa		4.4	□□□□□ -1.71
CCNL1-223	ENST00000481173	PRKAB1	Q9Y478	270 aa		4.4	□□□□□ -1.71
CCNL1-223	ENST00000481173	PCDHA13	Q9Y5I0	950 aa		4.4	□□□□□ -1.71
CCNL1-223	ENST00000481173	ZNF804B	A4D1E1	1349 aa		4.4	□□□□□ -1.71
CCNL1-223	ENST00000481173	TEX33	O43247	280 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	PROM1	O43490	865 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	BMP15	O95972	392 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	MT-CO1	P00395	513 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	IGKV2-30	P06310	120 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	PRR35	P0CG20	571 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	HOXB6	P17509	224 aa	Known RBP	4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	ATP8B2	P98198	1209 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	CREM	Q03060	361 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	GRM1	Q13255	1194 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	ETFDH	Q16134	617 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	GPR162	Q16538	588 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	TXNRD1	Q16881	649 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	C11orf87	Q6NUJ2	197 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	RASAL3	Q86YV0	1011 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	CBARP	Q8N350	705 aa	Predicted RBP	4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	JADE3	Q92613	823 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	FCRL4	Q96PJ5	515 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	TLR10	Q9BXR5	811 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	MKS1	Q9NXB0	559 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	VSX1	Q9NZR4	365 aa	Predicted RBP	4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	FLRT1	Q9NZU1	646 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173	MCM8	Q9UJA3	840 aa		4.39	□□□□□ -1.71
CCNL1-223	ENST00000481173		A0A1W2PS29	197 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173		K7ESF4	209 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	NDUFS2	O75306	463 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	SBK3	P0C264	359 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	C5AR1	P21730	350 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	SSBP2	P81877	361 aa	Predicted RBP	4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	TFF2	Q03403	129 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	FPGS	Q05932	587 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	LLGL1	Q15334	1064 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	NBPF8	Q3BBV2	869 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	INAVA	Q3KP66	663 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	CD300E	Q496F6	205 aa	Predicted RBP	4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	KRTAP5-11	Q6L8G4	156 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	RSPH3	Q86UC2	560 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	DCBLD1	Q8N8Z6	715 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	MYCBPAP	Q8TBZ2	947 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	TMX3	Q96JJ7	454 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	ZNF48	Q96MX3	618 aa	Predicted RBP	4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	HAPLN3	Q96S86	360 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	BRIP1	Q9BX63	1249 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	PUS7L	Q9H0K6	701 aa	Known RBP	4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	SPC25	Q9HBM1	224 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	TUBD1	Q9UJT1	453 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	CDYL	Q9Y232	598 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	ATP8A1	Q9Y2Q0	1164 aa		4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	SETD1B	Q9UPS6	1966 aa	Known RBP	4.38	□□□□□ -1.71
CCNL1-223	ENST00000481173	PRAMEF33	A0A0G2JMD5	474 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	TRIM75P	A6NK02	468 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	LINC01548	A6NM66	108 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	KCNAB3	O43448	404 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	PCDHGA12	O60330	932 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	PRAMEF10	O60809	474 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	MYBL2	P10244	700 aa		4.37	□□□□□ -1.71
CCNL1-223	ENST00000481173	SLC6A4	P31645	630 aa		4.37	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms