RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 SEC24AO95486 1093 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 PLA2G4BP0C869 781 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 MCF2P10911 925 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 PLS3P13797 630 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 PDCP20941 246 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 U2AF2P26368 475 aaKnown RBP eCLIP7.72□□□□□ -1.17
COL17A1-205ENST00000480127 BRCC3P46736 316 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 CXCL12P48061 93 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 CCR3P51677 355 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 SATB1Q01826 763 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 ROR1Q01973 937 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 CACNB1Q02641 598 aaPredicted RBP7.72□□□□□ -1.17
COL17A1-205ENST00000480127 ST3GAL1Q11201 340 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 SRSF5Q13243 272 aaKnown RBP7.72□□□□□ -1.17
COL17A1-205ENST00000480127 SIM2Q14190 667 aaPredicted RBP7.72□□□□□ -1.17
COL17A1-205ENST00000480127 PPP2R5DQ14738 602 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 UPP1Q16831 310 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 CTXN3Q4LDR2 81 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 CYP4A22Q5TCH4 519 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 SLC8B1Q6J4K2 584 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 ZNF280DQ6N043 979 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 RINT1Q6NUQ1 792 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 VITQ6UXI7 678 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 DSTYKQ6XUX3 929 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 PRR23BQ6ZRT6 265 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 KRI1Q8N9T8 703 aaKnown RBP7.72□□□□□ -1.17
COL17A1-205ENST00000480127 APPL2Q8NEU8 664 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 FAM200AQ8TCP9 573 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 IRF7Q92985 503 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 KIF12Q96FN5 646 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 TMX3Q96JJ7 454 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 CHAMP1Q96JM3 812 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 ZSWIM3Q96MP5 696 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 ASB16Q96NS5 453 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 PPP1R10Q96QC0 940 aaKnown RBP7.72□□□□□ -1.17
COL17A1-205ENST00000480127 ACO2Q99798 780 aaKnown RBP7.72□□□□□ -1.17
COL17A1-205ENST00000480127 CORO1BQ9BR76 489 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 TRMT61BQ9BVS5 477 aaKnown RBP7.72□□□□□ -1.17
COL17A1-205ENST00000480127 CDT1Q9H211 546 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 C17orf75Q9HAS0 396 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 CYP4F11Q9HBI6 524 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 GOLGA2P5Q9HBQ8 144 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 TNFSF13BQ9Y275 285 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 PIAS3Q9Y6X2 628 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 USP24Q9UPU5 2620 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 NCANO14594 1321 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 SMIM28A0A1B0GU29 152 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 CHURC1-FNTBB4DL54 471 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 K7ESF4 209 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 ARNTLO00327 626 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 ZNF197O14709 1029 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 TM4SF5O14894 197 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 TOM1L1O75674 476 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 ATF2P15336 505 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 PSMC3P17980 439 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 CCNE1P24864 410 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 PMLP29590 882 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 GDI1P31150 447 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 HOXC13P31276 330 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 RPL9P32969 192 aaKnown RBP7.71□□□□□ -1.18
COL17A1-205ENST00000480127 VIPR2P41587 438 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 GRM5P41594 1212 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 FNTBP49356 437 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 ECM1Q16610 540 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 KYAT1Q16773 422 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 WDR44Q5JSH3 913 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 NT5DC1Q5TFE4 455 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 ARMCX5Q6P1M9 558 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 PDZD4Q76G19 769 aaPredicted RBP7.71□□□□□ -1.18
COL17A1-205ENST00000480127 BRAPQ7Z569 592 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 TCEAL8Q8IYN2 117 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 HS6ST3Q8IZP7 471 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 IGSF22Q8N9C0 903 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 SMARCD2Q92925 531 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 ZNF512Q96ME7 567 aaPredicted RBP7.71□□□□□ -1.18
COL17A1-205ENST00000480127 CCDC113Q9H0I3 377 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 TMEM134Q9H6X4 195 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 RPF1Q9H9Y2 349 aaKnown RBP7.71□□□□□ -1.18
COL17A1-205ENST00000480127 PARVGQ9HBI0 331 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 KCND2Q9NZV8 630 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 CCDC39Q9UFE4 941 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 RALYQ9UKM9 306 aaKnown RBP7.71□□□□□ -1.18
COL17A1-205ENST00000480127 CHD8Q9HCK8 2581 aa7.71□□□□□ -1.18
COL17A1-205ENST00000480127 NPHP3-ACAD11A0A0J9YXS1 232 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 DPYSL4O14531 572 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 PAPSS2O95340 614 aaPredicted RBP7.7□□□□□ -1.18
COL17A1-205ENST00000480127 CLTAP09496 248 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 CXCL8P10145 99 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 MYL4P12829 197 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 GJA1P17302 382 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 GUCY2CP25092 1073 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 ABCD1P33897 745 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 CNR2P34972 360 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 ALDH1A3P47895 512 aa7.7□□□□□ -1.18
COL17A1-205ENST00000480127 TOB1P50616 345 aaPredicted RBP7.7□□□□□ -1.18
COL17A1-205ENST00000480127 MLLT6P55198 1093 aaPredicted RBP7.7□□□□□ -1.18
COL17A1-205ENST00000480127 ATP2C1P98194 919 aaPredicted RBP7.7□□□□□ -1.18
COL17A1-205ENST00000480127 CEBPZQ03701 1054 aaKnown RBP7.7□□□□□ -1.18
COL17A1-205ENST00000480127 SOX4Q06945 474 aaPredicted RBP7.7□□□□□ -1.18
COL17A1-205ENST00000480127 MRPL58Q14197 206 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms