RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 TRIM29Q14134 588 aa17.6■□□□□ 0.41
DDX56-210ENST00000479440 ARHGAP29Q52LW3 1261 aa17.6■□□□□ 0.41
DDX56-210ENST00000479440 TXNDC11Q6PKC3 985 aa17.6■□□□□ 0.41
DDX56-210ENST00000479440 RNF19BQ6ZMZ0 732 aa17.6■□□□□ 0.41
DDX56-210ENST00000479440 CACNA2D4Q7Z3S7 1137 aa17.6■□□□□ 0.41
DDX56-210ENST00000479440 TMC8Q8IU68 726 aa17.6■□□□□ 0.41
DDX56-210ENST00000479440 DIS3L2Q8IYB7 885 aaKnown RBP17.6■□□□□ 0.41
DDX56-210ENST00000479440 GAB3Q8WWW8 586 aa17.6■□□□□ 0.41
DDX56-210ENST00000479440 ZMAT2Q96NC0 199 aaKnown RBP17.6■□□□□ 0.41
DDX56-210ENST00000479440 ACAP3Q96P50 834 aa17.6■□□□□ 0.41
DDX56-210ENST00000479440 MRPL4Q9BYD3 311 aaKnown RBP17.6■□□□□ 0.41
DDX56-210ENST00000479440 PCDHB8Q9UN66 801 aa17.6■□□□□ 0.41
DDX56-210ENST00000479440 PCDHGA5Q9Y5G8 931 aa17.6■□□□□ 0.41
DDX56-210ENST00000479440 USP24Q9UPU5 2620 aa17.6■□□□□ 0.41
DDX56-210ENST00000479440 GREB1Q4ZG55 1949 aa17.59■□□□□ 0.41
DDX56-210ENST00000479440 CCDC163A0A0D9SF12 145 aa17.59■□□□□ 0.41
DDX56-210ENST00000479440 RPP40O75818 363 aaKnown RBP17.59■□□□□ 0.41
DDX56-210ENST00000479440 CTDNEP1O95476 244 aa17.59■□□□□ 0.41
DDX56-210ENST00000479440 FGF19O95750 216 aa17.59■□□□□ 0.41
DDX56-210ENST00000479440 CCDC192P0DO97 292 aa17.59■□□□□ 0.41
DDX56-210ENST00000479440 MCF2P10911 925 aa17.59■□□□□ 0.41
DDX56-210ENST00000479440 MARCKSP29966 332 aaPredicted RBP17.59■□□□□ 0.41
DDX56-210ENST00000479440 EPHB3P54753 998 aa17.59■□□□□ 0.41
DDX56-210ENST00000479440 PLCB2Q00722 1185 aa17.59■□□□□ 0.41
DDX56-210ENST00000479440 YWHAHQ04917 246 aaPredicted RBP17.59■□□□□ 0.41
DDX56-210ENST00000479440 CCINQ13939 588 aa17.59■□□□□ 0.41
DDX56-210ENST00000479440 PON2Q15165 354 aa17.59■□□□□ 0.41
DDX56-210ENST00000479440 STPG1Q5TH74 334 aa17.59■□□□□ 0.41
DDX56-210ENST00000479440 RSPRY1Q96DX4 576 aa17.59■□□□□ 0.41
DDX56-210ENST00000479440 TBC1D32Q96NH3 1257 aa17.59■□□□□ 0.41
DDX56-210ENST00000479440 ACO2Q99798 780 aaKnown RBP17.59■□□□□ 0.41
DDX56-210ENST00000479440 TMEM60Q9H2L4 133 aa17.59■□□□□ 0.41
DDX56-210ENST00000479440 OBP2AQ9NY56 170 aa17.59■□□□□ 0.41
DDX56-210ENST00000479440 BTBD18B2RXH4 712 aa17.58■□□□□ 0.4
DDX56-210ENST00000479440 TM4SF5O14894 197 aa17.58■□□□□ 0.4
DDX56-210ENST00000479440 PROS1P07225 676 aa17.58■□□□□ 0.4
DDX56-210ENST00000479440 MCM7P33993 719 aa17.58■□□□□ 0.4
DDX56-210ENST00000479440 ANKRD1Q15327 319 aa17.58■□□□□ 0.4
DDX56-210ENST00000479440 WDR44Q5JSH3 913 aa17.58■□□□□ 0.4
DDX56-210ENST00000479440 BEST2Q8NFU1 509 aa17.58■□□□□ 0.4
DDX56-210ENST00000479440 C18orf25Q96B23 403 aaPredicted RBP17.58■□□□□ 0.4
DDX56-210ENST00000479440 PTPRHQ9HD43 1115 aa17.58■□□□□ 0.4
DDX56-210ENST00000479440 TPCN1Q9ULQ1 816 aa17.58■□□□□ 0.4
DDX56-210ENST00000479440 F5P12259 2224 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 CCDC169A6NNP5 214 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 DTNBO60941 627 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 AKAP3O75969 853 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 OR52Z1P0C646 297 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 RAP1GAPP47736 663 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 ALDH1A3P47895 512 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 DMP1Q13316 513 aaPredicted RBP17.57■□□□□ 0.4
DDX56-210ENST00000479440 PTPAQ15257 358 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 CCDC6Q16204 474 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 ARHGAP15Q53QZ3 475 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 MPZL3Q6UWV2 235 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 ARID3BQ8IVW6 561 aaPredicted RBP17.57■□□□□ 0.4
DDX56-210ENST00000479440 TTC8Q8TAM2 541 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 TCHPQ9BT92 498 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 LRRC3Q9BY71 257 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 BHMT2Q9H2M3 363 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 TMEM134Q9H6X4 195 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 C2orf42Q9NWW7 574 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 GTSE1Q9NYZ3 720 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 ASB3Q9Y575 518 aa17.57■□□□□ 0.4
DDX56-210ENST00000479440 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.57■□□□□ 0.4
DDX56-210ENST00000479440 CFAP47Q6ZTR5 3102 aa17.56■□□□□ 0.4
DDX56-210ENST00000479440 KCNK5O95279 499 aa17.56■□□□□ 0.4
DDX56-210ENST00000479440 HARSP12081 509 aaKnown RBP17.56■□□□□ 0.4
DDX56-210ENST00000479440 FDPSP14324 419 aaKnown RBP17.56■□□□□ 0.4
DDX56-210ENST00000479440 MPLP40238 635 aa17.56■□□□□ 0.4
DDX56-210ENST00000479440 ORC2Q13416 577 aaPredicted RBP17.56■□□□□ 0.4
DDX56-210ENST00000479440 PLA2G2CQ5R387 149 aa17.56■□□□□ 0.4
DDX56-210ENST00000479440 STXBP5Q5T5C0 1151 aa17.56■□□□□ 0.4
DDX56-210ENST00000479440 BPIFB1Q8TDL5 484 aa17.56■□□□□ 0.4
DDX56-210ENST00000479440 ZFYVE19Q96K21 471 aa17.56■□□□□ 0.4
DDX56-210ENST00000479440 PGLYRP2Q96PD5 576 aa17.56■□□□□ 0.4
DDX56-210ENST00000479440 LSM14BQ9BX40 385 aaKnown RBP17.56■□□□□ 0.4
DDX56-210ENST00000479440 DNAJC25Q9H1X3 360 aa17.56■□□□□ 0.4
DDX56-210ENST00000479440 VPS45Q9NRW7 570 aa17.56■□□□□ 0.4
DDX56-210ENST00000479440 RXFP3Q9NSD7 469 aa17.56■□□□□ 0.4
DDX56-210ENST00000479440 SLC8A2Q9UPR5 921 aa17.56■□□□□ 0.4
DDX56-210ENST00000479440 CHD8Q9HCK8 2581 aa17.56■□□□□ 0.4
DDX56-210ENST00000479440 NUP210Q8TEM1 1887 aaPredicted RBP17.56■□□□□ 0.4
DDX56-210ENST00000479440 RALGAPA1Q6GYQ0 2036 aa17.55■□□□□ 0.4
DDX56-210ENST00000479440 OR6C75A6NL08 312 aa17.55■□□□□ 0.4
DDX56-210ENST00000479440 ATG13O75143 517 aa17.55■□□□□ 0.4
DDX56-210ENST00000479440 PROZP22891 400 aa17.55■□□□□ 0.4
DDX56-210ENST00000479440 NPTX2P47972 431 aa17.55■□□□□ 0.4
DDX56-210ENST00000479440 MCM2P49736 904 aa17.55■□□□□ 0.4
DDX56-210ENST00000479440 PEX3P56589 373 aa17.55■□□□□ 0.4
DDX56-210ENST00000479440 NOLC1Q14978 699 aaKnown RBP eCLIP17.55■□□□□ 0.4
DDX56-210ENST00000479440 GPR158Q5T848 1215 aa17.55■□□□□ 0.4
DDX56-210ENST00000479440 RNF43Q68DV7 783 aa17.55■□□□□ 0.4
DDX56-210ENST00000479440 PSAPL1Q6NUJ1 521 aa17.55■□□□□ 0.4
DDX56-210ENST00000479440 USP37Q86T82 979 aa17.55■□□□□ 0.4
DDX56-210ENST00000479440 ITIH5Q86UX2 942 aa17.55■□□□□ 0.4
DDX56-210ENST00000479440 KBTBD6Q86V97 674 aa17.55■□□□□ 0.4
DDX56-210ENST00000479440 PSMG2Q969U7 264 aa17.55■□□□□ 0.4
DDX56-210ENST00000479440 GCNAQ96QF7 691 aa17.55■□□□□ 0.4
DDX56-210ENST00000479440 TARS2Q9BW92 718 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms