RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 MARCKSP29966 332 aaPredicted RBP18.8■□□□□ 0.6
VIM-204ENST00000478746 FCHO2Q0JRZ9 810 aa18.8■□□□□ 0.6
VIM-204ENST00000478746 CCDC6Q16204 474 aa18.8■□□□□ 0.6
VIM-204ENST00000478746 WDR44Q5JSH3 913 aa18.8■□□□□ 0.6
VIM-204ENST00000478746 TXNDC11Q6PKC3 985 aa18.8■□□□□ 0.6
VIM-204ENST00000478746 GPIHBP1Q8IV16 184 aa18.8■□□□□ 0.6
VIM-204ENST00000478746 TTC8Q8TAM2 541 aa18.8■□□□□ 0.6
VIM-204ENST00000478746 ERMNQ8TAM6 284 aa18.8■□□□□ 0.6
VIM-204ENST00000478746 DDX12PQ92771 950 aa18.8■□□□□ 0.6
VIM-204ENST00000478746 KIFAP3Q92845 792 aa18.8■□□□□ 0.6
VIM-204ENST00000478746 LOXL4Q96JB6 756 aa18.8■□□□□ 0.6
VIM-204ENST00000478746 ACAP3Q96P50 834 aa18.8■□□□□ 0.6
VIM-204ENST00000478746 ACO2Q99798 780 aaKnown RBP18.8■□□□□ 0.6
VIM-204ENST00000478746 CDT1Q9H211 546 aa18.8■□□□□ 0.6
VIM-204ENST00000478746 TPCN1Q9ULQ1 816 aa18.8■□□□□ 0.6
VIM-204ENST00000478746 GREB1Q4ZG55 1949 aa18.79■□□□□ 0.6
VIM-204ENST00000478746 A0A1W2PRU2 124 aa18.79■□□□□ 0.6
VIM-204ENST00000478746 FDPSP14324 419 aaKnown RBP18.79■□□□□ 0.6
VIM-204ENST00000478746 HOXC13P31276 330 aa18.79■□□□□ 0.6
VIM-204ENST00000478746 CTHP32929 405 aa18.79■□□□□ 0.6
VIM-204ENST00000478746 MCM4P33991 863 aa18.79■□□□□ 0.6
VIM-204ENST00000478746 MCM7P33993 719 aa18.79■□□□□ 0.6
VIM-204ENST00000478746 PON2Q15165 354 aa18.79■□□□□ 0.6
VIM-204ENST00000478746 ZNF568Q3ZCX4 644 aa18.79■□□□□ 0.6
VIM-204ENST00000478746 ARID3BQ8IVW6 561 aaPredicted RBP18.79■□□□□ 0.6
VIM-204ENST00000478746 SYNPOQ8N3V7 929 aa18.79■□□□□ 0.6
VIM-204ENST00000478746 C18orf25Q96B23 403 aaPredicted RBP18.79■□□□□ 0.6
VIM-204ENST00000478746 TBC1D32Q96NH3 1257 aa18.79■□□□□ 0.6
VIM-204ENST00000478746 CCDC169A6NNP5 214 aa18.78■□□□□ 0.6
VIM-204ENST00000478746 DPYSL4O14531 572 aa18.78■□□□□ 0.6
VIM-204ENST00000478746 EPHB3P54753 998 aa18.78■□□□□ 0.6
VIM-204ENST00000478746 STPG1Q5TH74 334 aa18.78■□□□□ 0.6
VIM-204ENST00000478746 CACNA2D4Q7Z3S7 1137 aa18.78■□□□□ 0.6
VIM-204ENST00000478746 HAUS6Q7Z4H7 955 aa18.78■□□□□ 0.6
VIM-204ENST00000478746 DIS3L2Q8IYB7 885 aaKnown RBP18.78■□□□□ 0.6
VIM-204ENST00000478746 TCHPQ9BT92 498 aa18.78■□□□□ 0.6
VIM-204ENST00000478746 LRRC3Q9BY71 257 aa18.78■□□□□ 0.6
VIM-204ENST00000478746 PTPRHQ9HD43 1115 aa18.78■□□□□ 0.6
VIM-204ENST00000478746 RXFP3Q9NSD7 469 aa18.78■□□□□ 0.6
VIM-204ENST00000478746 GTSE1Q9NYZ3 720 aa18.78■□□□□ 0.6
VIM-204ENST00000478746 PCDHB8Q9UN66 801 aa18.78■□□□□ 0.6
VIM-204ENST00000478746 YIPF1Q9Y548 306 aa18.78■□□□□ 0.6
VIM-204ENST00000478746 PLD1Q13393 1074 aa18.77■□□□□ 0.6
VIM-204ENST00000478746 CCINQ13939 588 aa18.77■□□□□ 0.6
VIM-204ENST00000478746 ARHGAP29Q52LW3 1261 aa18.77■□□□□ 0.6
VIM-204ENST00000478746 GAB3Q8WWW8 586 aa18.77■□□□□ 0.6
VIM-204ENST00000478746 ZFYVE19Q96K21 471 aa18.77■□□□□ 0.6
VIM-204ENST00000478746 MRPL4Q9BYD3 311 aaKnown RBP18.77■□□□□ 0.6
VIM-204ENST00000478746 CNTN3Q9P232 1028 aa18.77■□□□□ 0.6
VIM-204ENST00000478746 SPAG17Q6Q759 2223 aa18.77■□□□□ 0.59
VIM-204ENST00000478746 RPP40O75818 363 aaKnown RBP18.76■□□□□ 0.59
VIM-204ENST00000478746 EPN2O95208 641 aa18.76■□□□□ 0.59
VIM-204ENST00000478746 PROS1P07225 676 aa18.76■□□□□ 0.59
VIM-204ENST00000478746 MCF2P10911 925 aa18.76■□□□□ 0.59
VIM-204ENST00000478746 MUTP22033 750 aa18.76■□□□□ 0.59
VIM-204ENST00000478746 RAP1GAPP47736 663 aa18.76■□□□□ 0.59
VIM-204ENST00000478746 ALDH1A3P47895 512 aa18.76■□□□□ 0.59
VIM-204ENST00000478746 TRIM29Q14134 588 aa18.76■□□□□ 0.59
VIM-204ENST00000478746 STXBP5Q5T5C0 1151 aa18.76■□□□□ 0.59
VIM-204ENST00000478746 KBTBD6Q86V97 674 aa18.76■□□□□ 0.59
VIM-204ENST00000478746 TMC8Q8IU68 726 aa18.76■□□□□ 0.59
VIM-204ENST00000478746 BEST2Q8NFU1 509 aa18.76■□□□□ 0.59
VIM-204ENST00000478746 LRRC3BQ96PB8 259 aa18.76■□□□□ 0.59
VIM-204ENST00000478746 PGLYRP2Q96PD5 576 aa18.76■□□□□ 0.59
VIM-204ENST00000478746 TARS2Q9BW92 718 aaKnown RBP18.76■□□□□ 0.59
VIM-204ENST00000478746 LSM14BQ9BX40 385 aaKnown RBP18.76■□□□□ 0.59
VIM-204ENST00000478746 BHMT2Q9H2M3 363 aa18.76■□□□□ 0.59
VIM-204ENST00000478746 TMEM134Q9H6X4 195 aa18.76■□□□□ 0.59
VIM-204ENST00000478746 FRYQ5TBA9 3013 aa18.76■□□□□ 0.59
VIM-204ENST00000478746 FAM208BQ5VWN6 2430 aa18.75■□□□□ 0.59
VIM-204ENST00000478746 CEP295Q9C0D2 2601 aa18.75■□□□□ 0.59
VIM-204ENST00000478746 BAHCC1Q9P281 2608 aa18.75■□□□□ 0.59
VIM-204ENST00000478746 CITO14578 2027 aa18.75■□□□□ 0.59
VIM-204ENST00000478746 EXTL3O43909 919 aa18.75■□□□□ 0.59
VIM-204ENST00000478746 OAZ2O95190 189 aa18.75■□□□□ 0.59
VIM-204ENST00000478746 KCNK5O95279 499 aa18.75■□□□□ 0.59
VIM-204ENST00000478746 CCDC192P0DO97 292 aa18.75■□□□□ 0.59
VIM-204ENST00000478746 NPTX2P47972 431 aa18.75■□□□□ 0.59
VIM-204ENST00000478746 PXNP49023 591 aaPredicted RBP18.75■□□□□ 0.59
VIM-204ENST00000478746 FOSBP53539 338 aa18.75■□□□□ 0.59
VIM-204ENST00000478746 PEX3P56589 373 aa18.75■□□□□ 0.59
VIM-204ENST00000478746 YWHAHQ04917 246 aaPredicted RBP18.75■□□□□ 0.59
VIM-204ENST00000478746 DUSP4Q13115 394 aa18.75■□□□□ 0.59
VIM-204ENST00000478746 OXCT2Q9BYC2 517 aaPredicted RBP18.75■□□□□ 0.59
VIM-204ENST00000478746 DNAJC25Q9H1X3 360 aa18.75■□□□□ 0.59
VIM-204ENST00000478746 SH2B1Q9NRF2 756 aaPredicted RBP18.75■□□□□ 0.59
VIM-204ENST00000478746 PHLPP2Q6ZVD8 1323 aa18.74■□□□□ 0.59
VIM-204ENST00000478746 ATRXP46100 2492 aa18.74■□□□□ 0.59
VIM-204ENST00000478746 CCDC163A0A0D9SF12 145 aa18.74■□□□□ 0.59
VIM-204ENST00000478746 VNN2O95498 520 aa18.74■□□□□ 0.59
VIM-204ENST00000478746 OR4Q2P0C623 313 aa18.74■□□□□ 0.59
VIM-204ENST00000478746 CCT6AP40227 531 aaKnown RBP18.74■□□□□ 0.59
VIM-204ENST00000478746 ECM1Q16610 540 aa18.74■□□□□ 0.59
VIM-204ENST00000478746 PLA2G2CQ5R387 149 aa18.74■□□□□ 0.59
VIM-204ENST00000478746 GPR158Q5T848 1215 aa18.74■□□□□ 0.59
VIM-204ENST00000478746 MPZL3Q6UWV2 235 aa18.74■□□□□ 0.59
VIM-204ENST00000478746 NECAB1Q8N987 351 aa18.74■□□□□ 0.59
VIM-204ENST00000478746 ATXN3LQ9H3M9 355 aa18.74■□□□□ 0.59
VIM-204ENST00000478746 OBP2AQ9NY56 170 aa18.74■□□□□ 0.59
VIM-204ENST00000478746 ASB3Q9Y575 518 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms