RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 FAM228BP0C875 321 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 MYBP10242 640 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 ACPPP15309 386 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 UCHL3P15374 230 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 CAPN2P17655 700 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 SLC9A1P19634 815 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 KLRC1P26715 233 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 PON1P27169 355 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 MZF1P28698 734 aaPredicted RBP5.35□□□□□ -1.55
SF3B6-202ENST00000478050 HOXD13P35453 343 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 PSMC2P35998 433 aaKnown RBP5.35□□□□□ -1.55
SF3B6-202ENST00000478050 STAT1P42224 750 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 CASP5P51878 434 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 GYS2P54840 703 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 JAM2P57087 298 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 SNAP25P60880 206 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 TNNC1P63316 161 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 DAB2P98082 770 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 APBA1Q02410 837 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 PAK2Q13177 524 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 ALCAMQ13740 583 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 MYBPC2Q14324 1141 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 PPP2R5AQ15172 486 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 RPS6KA1Q15418 735 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 ZSCAN26Q16670 478 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 AOC3Q16853 763 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 KIAA0753Q2KHM9 967 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 SHROOM1Q2M3G4 852 aaPredicted RBP5.35□□□□□ -1.55
SF3B6-202ENST00000478050 KRTAP19-4Q3LI73 84 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 DCAF17Q5H9S7 520 aaPredicted RBP5.35□□□□□ -1.55
SF3B6-202ENST00000478050 LRCH2Q5VUJ6 765 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 FKBP1CQ5VVH2 108 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 RINT1Q6NUQ1 792 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 DPY19L2P1Q6NXN4 242 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 C1orf186Q6ZWK4 172 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 H2AFVQ71UI9 128 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 ZNF765Q7L2R6 523 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 HS2ST1Q7LGA3 356 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 OTOP1Q7RTM1 612 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 IRF2BP2Q7Z5L9 587 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 ATG4DQ86TL0 474 aaPredicted RBP5.35□□□□□ -1.55
SF3B6-202ENST00000478050 FAM186BQ8IYM0 893 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 SYCE1Q8N0S2 351 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 ANKRD13CQ8N6S4 541 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 BCL7CQ8WUZ0 217 aaPredicted RBP5.35□□□□□ -1.55
SF3B6-202ENST00000478050 LMBR1Q8WVP7 490 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 FAM151AQ8WW52 585 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.35□□□□□ -1.55
SF3B6-202ENST00000478050 BSNDQ8WZ55 320 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 EZH1Q92800 747 aaPredicted RBP5.35□□□□□ -1.55
SF3B6-202ENST00000478050 ALKBH8Q96BT7 664 aaKnown RBP5.35□□□□□ -1.55
SF3B6-202ENST00000478050 DYDC2Q96IM9 177 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 UIMC1Q96RL1 719 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 RUFY1Q96T51 708 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 HSD17B14Q9BPX1 270 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 LRRC1Q9BTT6 524 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 WDR18Q9BV38 432 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 TEKT3Q9BXF9 490 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 TSPYL1Q9H0U9 437 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 FAM204AQ9H8W3 233 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 PARVGQ9HBI0 331 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 GDF3Q9NR23 364 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 CNTN3Q9P232 1028 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 ODF2LQ9ULJ1 636 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 ZBTB21Q9ULJ3 1066 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 NENFQ9UMX5 172 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 PKD1L2Q7Z442 2459 aa5.35□□□□□ -1.55
SF3B6-202ENST00000478050 MYH9P35579 1960 aaKnown RBP5.35□□□□□ -1.55
SF3B6-202ENST00000478050 DOCK1Q14185 1865 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 NCANO14594 1321 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 A0A1W2PRG0 241 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 SHTN1A0MZ66 631 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 A6NNZ2 444 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 RSPH10B2B2RC85 870 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 CCDC188H7C350 402 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 TGFB1I1O43294 461 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 PPIP5K2O43314 1243 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 AKAP3O75969 853 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 SLITRK3O94933 977 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 FTCDO95954 541 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 CFBP00751 764 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 PDGFAP04085 211 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 NFICP08651 508 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 VIL1P09327 827 aaKnown RBP5.34□□□□□ -1.55
SF3B6-202ENST00000478050 RSPH10BP0C881 870 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 MYBL2P10244 700 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 ACTN1P12814 892 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 RAB6AP20340 208 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 GUCY2CP25092 1073 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 HOXA13P31271 388 aaPredicted RBP5.34□□□□□ -1.55
SF3B6-202ENST00000478050 CXCR5P32302 372 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 MATR3P43243 847 aaKnown RBP eCLIP5.34□□□□□ -1.55
SF3B6-202ENST00000478050 CASP4P49662 377 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 ZNF131P52739 623 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 NPEPPSP55786 919 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 CYP4A11Q02928 519 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 ARID5AQ03989 594 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 PPFIA1Q13136 1202 aa5.34□□□□□ -1.55
SF3B6-202ENST00000478050 CTTNQ14247 550 aaKnown RBP5.34□□□□□ -1.55
SF3B6-202ENST00000478050 RRP1BQ14684 758 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms