RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 LRRIQ4A6NIV6 560 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 TRAPPC3O43617 180 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 ATG13O75143 517 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 VNN2O95498 520 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 BCKDHBP21953 392 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 MAPK8P45983 427 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 NLRP5P59047 1200 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 ITPRIPL2Q3MIP1 535 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 CTXN3Q4LDR2 81 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 TPGS2Q68CL5 300 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 PMS2CLQ68D20 193 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 NCAPH2Q6IBW4 605 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 PPP4R3CPQ6ZMV5 832 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 RNF19BQ6ZMZ0 732 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 LEMD2Q8NC56 503 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 SLC26A6Q9BXS9 759 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 DNAJC25Q9H1X3 360 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 KCNMB3Q9NPA1 279 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 AFF4Q9UHB7 1163 aaKnown RBP16.9■□□□□ 0.3
SMG5-204ENST00000476954 YIPF1Q9Y548 306 aa16.9■□□□□ 0.3
SMG5-204ENST00000476954 TNRC6BQ9UPQ9 1833 aaKnown RBP16.89■□□□□ 0.29
SMG5-204ENST00000476954 FAM221BA6H8Z2 402 aa16.89■□□□□ 0.29
SMG5-204ENST00000476954 OTOL1A6NHN0 477 aaPredicted RBP16.89■□□□□ 0.29
SMG5-204ENST00000476954 EIF4E1BA6NMX2 242 aaKnown RBP16.89■□□□□ 0.29
SMG5-204ENST00000476954 DPYSL4O14531 572 aa16.89■□□□□ 0.29
SMG5-204ENST00000476954 PRB1P04280 392 aa16.89■□□□□ 0.29
SMG5-204ENST00000476954 CPA1P15085 419 aa16.89■□□□□ 0.29
SMG5-204ENST00000476954 U2AF2P26368 475 aaKnown RBP eCLIP16.89■□□□□ 0.293e-7■■□□□ 13.2
SMG5-204ENST00000476954 RCAN1P53805 252 aa16.89■□□□□ 0.29
SMG5-204ENST00000476954 MRPL58Q14197 206 aaKnown RBP16.89■□□□□ 0.29
SMG5-204ENST00000476954 NTRK3Q16288 839 aa16.89■□□□□ 0.29
SMG5-204ENST00000476954 INF2Q27J81 1249 aa16.89■□□□□ 0.29
SMG5-204ENST00000476954 MAEAQ7L5Y9 396 aa16.89■□□□□ 0.29
SMG5-204ENST00000476954 CYP2U1Q7Z449 544 aa16.89■□□□□ 0.29
SMG5-204ENST00000476954 HAUS6Q7Z4H7 955 aa16.89■□□□□ 0.29
SMG5-204ENST00000476954 TPH2Q8IWU9 490 aa16.89■□□□□ 0.29
SMG5-204ENST00000476954 LRIG1Q96JA1 1093 aa16.89■□□□□ 0.29
SMG5-204ENST00000476954 SMG9Q9H0W8 520 aaKnown RBP16.89■□□□□ 0.29
SMG5-204ENST00000476954 CRISPLD1Q9H336 500 aa16.89■□□□□ 0.29
SMG5-204ENST00000476954 FZD8Q9H461 694 aa16.89■□□□□ 0.29
SMG5-204ENST00000476954 SLC32A1Q9H598 525 aa16.89■□□□□ 0.29
SMG5-204ENST00000476954 ZSWIM4Q9H7M6 989 aa16.89■□□□□ 0.29
SMG5-204ENST00000476954 PRMT7Q9NVM4 692 aaPredicted RBP16.89■□□□□ 0.29
SMG5-204ENST00000476954 CCDC194A0A1B0GVG4 234 aa16.88■□□□□ 0.29
SMG5-204ENST00000476954 M0R2N6 131 aa16.88■□□□□ 0.29
SMG5-204ENST00000476954 N4BP3O15049 544 aa16.88■□□□□ 0.29
SMG5-204ENST00000476954 LIG1P18858 919 aa16.88■□□□□ 0.29
SMG5-204ENST00000476954 AKAP17AQ02040 695 aaKnown RBP16.88■□□□□ 0.29
SMG5-204ENST00000476954 GRSF1Q12849 480 aaKnown RBP eCLIP16.88■□□□□ 0.29
SMG5-204ENST00000476954 KARSQ15046 597 aaKnown RBP16.88■□□□□ 0.29
SMG5-204ENST00000476954 TMEM132AQ24JP5 1023 aa16.88■□□□□ 0.29
SMG5-204ENST00000476954 MOXD1Q6UVY6 613 aa16.88■□□□□ 0.29
SMG5-204ENST00000476954 GAREM2Q75VX8 874 aa16.88■□□□□ 0.29
SMG5-204ENST00000476954 PIP4P1Q86T03 277 aa16.88■□□□□ 0.29
SMG5-204ENST00000476954 RASEFQ8IZ41 740 aa16.88■□□□□ 0.29
SMG5-204ENST00000476954 PIGKQ92643 395 aa16.88■□□□□ 0.29
SMG5-204ENST00000476954 HAS1Q92839 578 aa16.88■□□□□ 0.29
SMG5-204ENST00000476954 TPSD1Q9BZJ3 242 aa16.88■□□□□ 0.29
SMG5-204ENST00000476954 HPS4Q9NQG7 708 aa16.88■□□□□ 0.29
SMG5-204ENST00000476954 CACNA2D2Q9NY47 1150 aa16.88■□□□□ 0.29
SMG5-204ENST00000476954 PCDHA4Q9UN74 947 aa16.88■□□□□ 0.29
SMG5-204ENST00000476954 PTPRDP23468 1912 aa16.88■□□□□ 0.29
SMG5-204ENST00000476954 CCDC196A0A1B0GTZ2 297 aa16.87■□□□□ 0.29
SMG5-204ENST00000476954 H7C4K7 107 aa16.87■□□□□ 0.29
SMG5-204ENST00000476954 SLITRK3O94933 977 aa16.87■□□□□ 0.29
SMG5-204ENST00000476954 APBB3O95704 486 aa16.87■□□□□ 0.29
SMG5-204ENST00000476954 DHPSP49366 369 aaPredicted RBP16.87■□□□□ 0.29
SMG5-204ENST00000476954 DGKEP52429 567 aa16.87■□□□□ 0.29
SMG5-204ENST00000476954 NPY5RQ15761 445 aa16.87■□□□□ 0.29
SMG5-204ENST00000476954 GPR158Q5T848 1215 aa16.87■□□□□ 0.29
SMG5-204ENST00000476954 TRIM68Q6AZZ1 485 aa16.87■□□□□ 0.29
SMG5-204ENST00000476954 RPLP0P6Q8NHW5 317 aa16.87■□□□□ 0.29
SMG5-204ENST00000476954 BPIFB1Q8TDL5 484 aa16.87■□□□□ 0.29
SMG5-204ENST00000476954 EZH1Q92800 747 aaPredicted RBP16.87■□□□□ 0.29
SMG5-204ENST00000476954 PRIMPOLQ96LW4 560 aa16.87■□□□□ 0.29
SMG5-204ENST00000476954 UROC1Q96N76 676 aa16.87■□□□□ 0.29
SMG5-204ENST00000476954 POLR3CQ9BUI4 534 aaPredicted RBP16.87■□□□□ 0.29
SMG5-204ENST00000476954 ANO2Q9NQ90 1003 aa16.87■□□□□ 0.29
SMG5-204ENST00000476954 GKN1Q9NS71 199 aa16.87■□□□□ 0.29
SMG5-204ENST00000476954 CFAP46Q8IYW2 2715 aa16.87■□□□□ 0.29
SMG5-204ENST00000476954 URB1O60287 2271 aaKnown RBP16.86■□□□□ 0.29
SMG5-204ENST00000476954 SHROOM3Q8TF72 1996 aa16.86■□□□□ 0.29
SMG5-204ENST00000476954 CELSR3Q9NYQ7 3312 aa16.86■□□□□ 0.29
SMG5-204ENST00000476954 SMIM28A0A1B0GU29 152 aa16.86■□□□□ 0.29
SMG5-204ENST00000476954 PODXLO00592 558 aa16.86■□□□□ 0.29
SMG5-204ENST00000476954 TRDMT1O14717 391 aaKnown RBP16.86■□□□□ 0.29
SMG5-204ENST00000476954 DGAT1O75907 488 aa16.86■□□□□ 0.29
SMG5-204ENST00000476954 OR4Q2P0C623 313 aa16.86■□□□□ 0.29
SMG5-204ENST00000476954 CPB1P15086 417 aa16.86■□□□□ 0.29
SMG5-204ENST00000476954 PRPF4BQ13523 1007 aaKnown RBP16.86■□□□□ 0.29
SMG5-204ENST00000476954 DMC1Q14565 340 aa16.86■□□□□ 0.29
SMG5-204ENST00000476954 TRIM61Q5EBN2 209 aa16.86■□□□□ 0.29
SMG5-204ENST00000476954 RAB44Q7Z6P3 723 aaPredicted RBP16.86■□□□□ 0.29
SMG5-204ENST00000476954 BLIDQ8IZY5 108 aa16.86■□□□□ 0.29
SMG5-204ENST00000476954 GLIS3Q8NEA6 775 aa16.86■□□□□ 0.29
SMG5-204ENST00000476954 CRELD1Q96HD1 420 aa16.86■□□□□ 0.29
SMG5-204ENST00000476954 FAM20AQ96MK3 541 aa16.86■□□□□ 0.29
SMG5-204ENST00000476954 PGLYRP2Q96PD5 576 aa16.86■□□□□ 0.29
SMG5-204ENST00000476954 ESYT1Q9BSJ8 1104 aa16.86■□□□□ 0.29
SMG5-204ENST00000476954 RNF26Q9BY78 433 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms