RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 PDZD4Q76G19 769 aaPredicted RBP14.29□□□□□ -0.12
MRPL55-228ENST00000476267 HAUS6Q7Z4H7 955 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 TMC8Q8IU68 726 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 KIAA2013Q8IYS2 634 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 DCLK2Q8N568 766 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 SMARCD2Q92925 531 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 FIZ1Q96SL8 496 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 PLIN2Q99541 437 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 DNAJC25Q9H1X3 360 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 ZFP14Q9HCL3 533 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 ODF2LQ9ULJ1 636 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 PCDHGA2Q9Y5H1 932 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 KIF26AQ9ULI4 1882 aaPredicted RBP14.29□□□□□ -0.12
MRPL55-228ENST00000476267 CACNA1AO00555 2505 aa14.28□□□□□ -0.12
MRPL55-228ENST00000476267 SLC26A4O43511 780 aa14.28□□□□□ -0.12
MRPL55-228ENST00000476267 KINO60870 393 aaKnown RBP14.28□□□□□ -0.12
MRPL55-228ENST00000476267 OR4Q2P0C623 313 aa14.28□□□□□ -0.12
MRPL55-228ENST00000476267 YWHAHQ04917 246 aaPredicted RBP14.28□□□□□ -0.12
MRPL55-228ENST00000476267 RABEP1Q15276 862 aa14.28□□□□□ -0.12
MRPL55-228ENST00000476267 ZRSR1Q15695 479 aaKnown RBP14.28□□□□□ -0.12
MRPL55-228ENST00000476267 ENOX2Q16206 610 aaKnown RBP14.28□□□□□ -0.12
MRPL55-228ENST00000476267 RIF1Q5UIP0 2472 aaKnown RBP14.28□□□□□ -0.12
MRPL55-228ENST00000476267 SLC39A4Q6P5W5 647 aa14.28□□□□□ -0.12
MRPL55-228ENST00000476267 LEMD2Q8NC56 503 aa14.28□□□□□ -0.12
MRPL55-228ENST00000476267 SHKBP1Q8TBC3 707 aa14.28□□□□□ -0.12
MRPL55-228ENST00000476267 AK8Q96MA6 479 aa14.28□□□□□ -0.12
MRPL55-228ENST00000476267 REEP2Q9BRK0 252 aa14.28□□□□□ -0.12
MRPL55-228ENST00000476267 OXCT2Q9BYC2 517 aaPredicted RBP14.28□□□□□ -0.12
MRPL55-228ENST00000476267 ZNF334Q9HCZ1 680 aaPredicted RBP14.28□□□□□ -0.12
MRPL55-228ENST00000476267 BLOC1S4Q9NUP1 217 aa14.28□□□□□ -0.12
MRPL55-228ENST00000476267 LARSQ9P2J5 1176 aaKnown RBP14.28□□□□□ -0.12
MRPL55-228ENST00000476267 UBQLN1Q9UMX0 589 aaKnown RBP14.28□□□□□ -0.12
MRPL55-228ENST00000476267 YIPF1Q9Y548 306 aa14.28□□□□□ -0.12
MRPL55-228ENST00000476267 TIMM13Q9Y5L4 95 aaPredicted RBP14.28□□□□□ -0.12
MRPL55-228ENST00000476267 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.28□□□□□ -0.12
MRPL55-228ENST00000476267 LACTBL1A8MY62 500 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 H0YCG3 227 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 PPEF2O14830 753 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 CPB1P15086 417 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 GJA1P17302 382 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 PSMC3P17980 439 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 GJB2P29033 226 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 GUCY2FP51841 1108 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 CSTF1Q05048 431 aaKnown RBP14.27□□□□□ -0.13
MRPL55-228ENST00000476267 MTAPQ13126 283 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 GPR17Q13304 367 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 CYP4A22Q5TCH4 519 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 MCTP1Q6DN14 999 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 MAMSTRQ6ZN01 415 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 DEPDC1BQ8WUY9 529 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 IRF7Q92985 503 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 RSPRY1Q96DX4 576 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 KIF12Q96FN5 646 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 TMX3Q96JJ7 454 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 ZNF512Q96ME7 567 aaPredicted RBP14.27□□□□□ -0.13
MRPL55-228ENST00000476267 MKNK1Q9BUB5 465 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 TRMT61BQ9BVS5 477 aaKnown RBP14.27□□□□□ -0.13
MRPL55-228ENST00000476267 EPC1Q9H2F5 836 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 CHRDQ9H2X0 955 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 ASAH2Q9NR71 780 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 ZSCAN32Q9NX65 697 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 DLL3Q9NYJ7 618 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 TBX20Q9UMR3 447 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 KIF3AQ9Y496 699 aa14.27□□□□□ -0.13
MRPL55-228ENST00000476267 A0A0B4J269 797 aa14.26□□□□□ -0.13
MRPL55-228ENST00000476267 OGTO15294 1046 aa14.26□□□□□ -0.13
MRPL55-228ENST00000476267 NCAM2O15394 837 aa14.26□□□□□ -0.13
MRPL55-228ENST00000476267 TYMPP19971 482 aa14.26□□□□□ -0.13
MRPL55-228ENST00000476267 SCP2P22307 547 aa14.26□□□□□ -0.13
MRPL55-228ENST00000476267 VIPR2P41587 438 aa14.26□□□□□ -0.13
MRPL55-228ENST00000476267 GRIN1Q05586 938 aa14.26□□□□□ -0.13
MRPL55-228ENST00000476267 PPP2R3AQ06190 1150 aa14.26□□□□□ -0.13
MRPL55-228ENST00000476267 TEAD2Q15562 447 aa14.26□□□□□ -0.13
MRPL55-228ENST00000476267 SPATA1Q5VX52 437 aa14.26□□□□□ -0.13
MRPL55-228ENST00000476267 IQCEQ6IPM2 695 aa14.26□□□□□ -0.13
MRPL55-228ENST00000476267 TSSK4Q6SA08 328 aa14.26□□□□□ -0.13
MRPL55-228ENST00000476267 ELMOD1Q8N336 334 aa14.26□□□□□ -0.13
MRPL55-228ENST00000476267 ZSCAN18Q8TBC5 510 aaPredicted RBP14.26□□□□□ -0.13
MRPL55-228ENST00000476267 TSPAN18Q96SJ8 248 aa14.26□□□□□ -0.13
MRPL55-228ENST00000476267 BRD9Q9H8M2 597 aa14.26□□□□□ -0.13
MRPL55-228ENST00000476267 CPSF3Q9UKF6 684 aaKnown RBP14.26□□□□□ -0.13
MRPL55-228ENST00000476267 MRPS17Q9Y2R5 130 aaKnown RBP14.26□□□□□ -0.13
MRPL55-228ENST00000476267 OTOGLQ3ZCN5 2332 aa14.26□□□□□ -0.13
MRPL55-228ENST00000476267 MTMR11A4FU01 709 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 OR6C75A6NL08 312 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 MAN2B1O00754 1011 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 HNRNPDLO14979 420 aaKnown RBP14.25□□□□□ -0.13
MRPL55-228ENST00000476267 MYL4P12829 197 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 MARCKSP29966 332 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-228ENST00000476267 GDI1P31150 447 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 LIG4P49917 911 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 MLLT6P55198 1093 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-228ENST00000476267 LILRA4P59901 499 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 GTF2BQ00403 316 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 FCHO2Q0JRZ9 810 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 MYBPC2Q14324 1141 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 KYAT1Q16773 422 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 WDR44Q5JSH3 913 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 CENPPQ6IPU0 288 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 GPBP1Q86WP2 473 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms