RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 CLDN3O15551 220 aa17.03■□□□□ 0.32
SRRT-209ENST00000474896 PLS3P13797 630 aa17.03■□□□□ 0.32
SRRT-209ENST00000474896 CPB1P15086 417 aa17.03■□□□□ 0.32
SRRT-209ENST00000474896 GUCY2CP25092 1073 aa17.03■□□□□ 0.32
SRRT-209ENST00000474896 MATR3P43243 847 aaKnown RBP eCLIP17.03■□□□□ 0.321e-8■■■■■ 28.4
SRRT-209ENST00000474896 SMTNP53814 917 aa17.03■□□□□ 0.32
SRRT-209ENST00000474896 SPAG1Q07617 926 aa17.03■□□□□ 0.32
SRRT-209ENST00000474896 NOLC1Q14978 699 aaKnown RBP eCLIP17.03■□□□□ 0.32
SRRT-209ENST00000474896 TEAD2Q15562 447 aa17.03■□□□□ 0.32
SRRT-209ENST00000474896 MAMSTRQ6ZN01 415 aa17.03■□□□□ 0.32
SRRT-209ENST00000474896 MFSD6LQ8IWD5 586 aa17.03■□□□□ 0.32
SRRT-209ENST00000474896 HSCBQ8IWL3 235 aa17.03■□□□□ 0.32
SRRT-209ENST00000474896 LEMD2Q8NC56 503 aa17.03■□□□□ 0.32
SRRT-209ENST00000474896 TMEM161BQ8NDZ6 487 aa17.03■□□□□ 0.32
SRRT-209ENST00000474896 ZSCAN18Q8TBC5 510 aaPredicted RBP17.03■□□□□ 0.32
SRRT-209ENST00000474896 SPIRE2Q8WWL2 714 aa17.03■□□□□ 0.32
SRRT-209ENST00000474896 TIPINQ9BVW5 301 aa17.03■□□□□ 0.32
SRRT-209ENST00000474896 CHRDQ9H2X0 955 aa17.03■□□□□ 0.32
SRRT-209ENST00000474896 TIMM13Q9Y5L4 95 aaPredicted RBP17.03■□□□□ 0.32
SRRT-209ENST00000474896 MAPTP10636 758 aaKnown RBP17.02■□□□□ 0.32
SRRT-209ENST00000474896 SDHBP21912 280 aa17.02■□□□□ 0.32
SRRT-209ENST00000474896 PRPHP41219 470 aa17.02■□□□□ 0.32
SRRT-209ENST00000474896 ATXN1P54253 815 aaKnown RBP17.02■□□□□ 0.32
SRRT-209ENST00000474896 EPHA5P54756 1037 aa17.02■□□□□ 0.32
SRRT-209ENST00000474896 NRLP54845 237 aa17.02■□□□□ 0.32
SRRT-209ENST00000474896 DEPDC1BQ8WUY9 529 aa17.02■□□□□ 0.32
SRRT-209ENST00000474896 PLIN2Q99541 437 aa17.02■□□□□ 0.32
SRRT-209ENST00000474896 GPR88Q9GZN0 384 aa17.02■□□□□ 0.32
SRRT-209ENST00000474896 PLEKHA5Q9HAU0 1116 aa17.02■□□□□ 0.32
SRRT-209ENST00000474896 TRPV4Q9HBA0 871 aa17.02■□□□□ 0.32
SRRT-209ENST00000474896 PIAS3Q9Y6X2 628 aa17.02■□□□□ 0.32
SRRT-209ENST00000474896 HEPACAM2A8MVW5 462 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 PRR5-ARHGAP8B1AHC4 643 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 M0QZQ0 153 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 OAZ2O95190 189 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 OR4Q2P0C623 313 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 CXCL8P10145 99 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 TDGF1P13385 188 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 TGM1P22735 817 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 CCNE1P24864 410 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 ARHGAP8P85298 464 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 YWHAHQ04917 246 aaPredicted RBP17.01■□□□□ 0.31
SRRT-209ENST00000474896 MCL1Q07820 350 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 CUL4AQ13619 759 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 PPP2R5DQ14738 602 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 ZPBP2Q6X784 338 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 GPIHBP1Q8IV16 184 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 SYT2Q8N9I0 419 aaPredicted RBP17.01■□□□□ 0.31
SRRT-209ENST00000474896 BEST2Q8NFU1 509 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 SHKBP1Q8TBC3 707 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 KIF12Q96FN5 646 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 PGLYRP2Q96PD5 576 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 HAPLN2Q9GZV7 340 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 SLITRK6Q9H5Y7 841 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.01■□□□□ 0.31
SRRT-209ENST00000474896 GMEB2Q9UKD1 530 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 USP18Q9UMW8 372 aa17.01■□□□□ 0.31
SRRT-209ENST00000474896 TICRRQ7Z2Z1 1910 aa17■□□□□ 0.31
SRRT-209ENST00000474896 TTC26A0AVF1 554 aa17■□□□□ 0.31
SRRT-209ENST00000474896 VNN2O95498 520 aa17■□□□□ 0.31
SRRT-209ENST00000474896 CLTAP09496 248 aa17■□□□□ 0.31
SRRT-209ENST00000474896 CHRNB1P11230 501 aa17■□□□□ 0.31
SRRT-209ENST00000474896 LRPAP1P30533 357 aa17■□□□□ 0.31
SRRT-209ENST00000474896 DUSP4Q13115 394 aa17■□□□□ 0.31
SRRT-209ENST00000474896 ZBTB6Q15916 424 aa17■□□□□ 0.31
SRRT-209ENST00000474896 LPAL2Q16609 132 aa17■□□□□ 0.31
SRRT-209ENST00000474896 DSTYKQ6XUX3 929 aa17■□□□□ 0.31
SRRT-209ENST00000474896 USP37Q86T82 979 aa17■□□□□ 0.31
SRRT-209ENST00000474896 YAF2Q8IY57 180 aa17■□□□□ 0.31
SRRT-209ENST00000474896 CELF5Q8N6W0 485 aaKnown RBP17■□□□□ 0.31
SRRT-209ENST00000474896 E2F7Q96AV8 911 aa17■□□□□ 0.31
SRRT-209ENST00000474896 PNMA5Q96PV4 448 aa17■□□□□ 0.31
SRRT-209ENST00000474896 IER2Q9BTL4 223 aa17■□□□□ 0.31
SRRT-209ENST00000474896 LRRC3Q9BY71 257 aa17■□□□□ 0.31
SRRT-209ENST00000474896 RAB23Q9ULC3 237 aa17■□□□□ 0.31
SRRT-209ENST00000474896 SLC27A5Q9Y2P5 690 aa17■□□□□ 0.31
SRRT-209ENST00000474896 YIPF1Q9Y548 306 aa17■□□□□ 0.31
SRRT-209ENST00000474896 MYH11P35749 1972 aa17■□□□□ 0.31
SRRT-209ENST00000474896 NCANO14594 1321 aa16.99■□□□□ 0.31
SRRT-209ENST00000474896 PDCD11Q14690 1871 aaKnown RBP16.99■□□□□ 0.31
SRRT-209ENST00000474896 NCOR2Q9Y618 2525 aa16.99■□□□□ 0.31
SRRT-209ENST00000474896 NPHP3-ACAD11A0A0J9YXS1 232 aa16.99■□□□□ 0.31
SRRT-209ENST00000474896 A0A1W2PRU2 124 aa16.99■□□□□ 0.31
SRRT-209ENST00000474896 LACTBL1A8MY62 500 aa16.99■□□□□ 0.31
SRRT-209ENST00000474896 CYP3A5P20815 502 aa16.99■□□□□ 0.31
SRRT-209ENST00000474896 TNFSF9P41273 254 aa16.99■□□□□ 0.31
SRRT-209ENST00000474896 ALDH1A3P47895 512 aa16.99■□□□□ 0.31
SRRT-209ENST00000474896 CXCL12P48061 93 aa16.99■□□□□ 0.31
SRRT-209ENST00000474896 CCR3P51677 355 aa16.99■□□□□ 0.31
SRRT-209ENST00000474896 EPHB3P54753 998 aa16.99■□□□□ 0.31
SRRT-209ENST00000474896 SLC12A3P55017 1021 aa16.99■□□□□ 0.31
SRRT-209ENST00000474896 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
SRRT-209ENST00000474896 LMNB2Q03252 620 aa16.99■□□□□ 0.31
SRRT-209ENST00000474896 HYIQ5T013 277 aa16.99■□□□□ 0.31
SRRT-209ENST00000474896 CSGALNACT1Q8TDX6 532 aa16.99■□□□□ 0.31
SRRT-209ENST00000474896 RSPRY1Q96DX4 576 aa16.99■□□□□ 0.31
SRRT-209ENST00000474896 BICD1Q96G01 975 aa16.99■□□□□ 0.31
SRRT-209ENST00000474896 OXCT2Q9BYC2 517 aaPredicted RBP16.99■□□□□ 0.31
SRRT-209ENST00000474896 CRISPLD1Q9H336 500 aa16.99■□□□□ 0.31
SRRT-209ENST00000474896 PARD6AQ9NPB6 346 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms