RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 KREMEN2Q8NCW0 462 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 GIMAP8Q8ND71 665 aaPredicted RBP4.04□□□□□ -1.76
XRN1-209ENST00000472625 C1orf159Q96HA4 380 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 CDHR1Q96JP9 859 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 PTCHD1Q96NR3 888 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 RMDN3Q96TC7 470 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 PRRX2Q99811 253 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 TMEM47Q9BQJ4 181 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 DSCC1Q9BVC3 393 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 CDADC1Q9BWV3 514 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 AMNQ9BXJ7 453 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 UPF3BQ9BZI7 483 aaKnown RBP4.04□□□□□ -1.76
XRN1-209ENST00000472625 KRT23Q9C075 422 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 CRTAC1Q9NQ79 661 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 PDGFCQ9NRA1 345 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 ACTR10Q9NZ32 417 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 KLHL14Q9P2G3 628 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 MBD1Q9UIS9 605 aaPredicted RBP4.04□□□□□ -1.76
XRN1-209ENST00000472625 KCTD3Q9Y597 815 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 MYO5AQ9Y4I1 1855 aaKnown RBP4.04□□□□□ -1.76
XRN1-209ENST00000472625 COL11A1P12107 1806 aaPredicted RBP4.04□□□□□ -1.76
XRN1-209ENST00000472625 BAZ2AQ9UIF9 1905 aaKnown RBP4.03□□□□□ -1.76
XRN1-209ENST00000472625 FRMPD2Q68DX3 1309 aaPredicted RBP4.03□□□□□ -1.76
XRN1-209ENST00000472625 TEX51A0A1B0GUA7 166 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 ERICH2A1L162 156 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 SMIM22K7EJ46 135 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 STXBP3O00186 592 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 SUSD5O60279 629 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 SEMA7AO75326 666 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 PPFIA4O75335 1185 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 FGAP02671 866 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 CD3EP07766 207 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 PARP1P09874 1014 aaKnown RBP4.03□□□□□ -1.76
XRN1-209ENST00000472625 SRGAP2BP0DMP2 458 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 CKBP12277 381 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 PNLIPP16233 465 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 BMP7P18075 431 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 HOXA5P20719 270 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 VIPR1P32241 457 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 GRIA2P42262 883 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 ZNF143P52747 638 aaPredicted RBP4.03□□□□□ -1.76
XRN1-209ENST00000472625 ERVK-21P61565 698 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 GHRHRQ02643 423 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 ARHGAP1Q07960 439 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 TRDNQ13061 729 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 HDAC1Q13547 482 aaPredicted RBP4.03□□□□□ -1.76
XRN1-209ENST00000472625 NEDD9Q14511 834 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 SF1Q15637 639 aaKnown RBP4.03□□□□□ -1.76
XRN1-209ENST00000472625 KIAA0753Q2KHM9 967 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 VMACQ2NL98 169 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 LEXMQ3ZCV2 418 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 USH1GQ495M9 461 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 NAALADL2Q58DX5 795 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 TSHZ3Q63HK5 1081 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 TAF2Q6P1X5 1199 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 XRRA1Q6P2D8 792 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 RSPH3Q86UC2 560 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 CCDC103Q8IW40 242 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 TRIM59Q8IWR1 403 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 AFG1LQ8WV93 481 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 CPLX3Q8WVH0 158 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 CLEC4DQ8WXI8 215 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 SEPT8Q92599 483 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 MRPL38Q96DV4 380 aaKnown RBP4.03□□□□□ -1.76
XRN1-209ENST00000472625 C20orf173Q96LM9 149 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 YME1L1Q96TA2 773 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 C11orf84Q9BUA3 381 aaPredicted RBP4.03□□□□□ -1.76
XRN1-209ENST00000472625 LMAN2LQ9H0V9 348 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 UBE2ZQ9H832 354 aaPredicted RBP4.03□□□□□ -1.76
XRN1-209ENST00000472625 IL17RBQ9NRM6 502 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 DIAPH3Q9NSV4 1193 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 IMPACTQ9P2X3 320 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 TMEFF2Q9UIK5 374 aaPredicted RBP4.03□□□□□ -1.76
XRN1-209ENST00000472625 MSRB2Q9Y3D2 182 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 HCFC2Q9Y5Z7 792 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 NCOR1O75376 2440 aa4.03□□□□□ -1.76
XRN1-209ENST00000472625 TANC1Q9C0D5 1861 aa4.03□□□□□ -1.77
XRN1-209ENST00000472625 PIEZO1Q92508 2521 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 MYH4Q9Y623 1939 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 C17orf102A2RUQ5 167 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 LINC01553A4QN01 128 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 NUDT19A8MXV4 375 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 RSPH10B2B2RC85 870 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 PI4K2BG5E9Z4 385 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 ZBTB5O15062 677 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 DCXO43602 365 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 NMT2O60551 498 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 CHGBP05060 677 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 RB1P06400 928 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 ITGAVP06756 1048 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 RSPH10BP0C881 870 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 MYOGP15173 224 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 KCNA5P22460 613 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 CCND2P30279 289 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 SLC16A2P36021 539 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 THPOP40225 353 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 BUD31P41223 144 aaPredicted RBP4.02□□□□□ -1.77
XRN1-209ENST00000472625 KCNQ1P51787 676 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 CDR1P51861 262 aa4.02□□□□□ -1.77
XRN1-209ENST00000472625 PDE1AP54750 535 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms