RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 TIMM13Q9Y5L4 95 aaPredicted RBP7.55□□□□□ -1.2
HDAC1-204ENST00000471488 ARID2Q68CP9 1835 aa7.55□□□□□ -1.2
HDAC1-204ENST00000471488 F5P12259 2224 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 SPAARA0A1B0GVQ0 90 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 LNP1A1A4G5 178 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 ARNTLO00327 626 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 SOAT2O75908 522 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 ABLIM3O94929 683 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 SLITRK3O94933 977 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 PAPSS2O95340 614 aaPredicted RBP7.54□□□□□ -1.2
HDAC1-204ENST00000471488 DEXIO95424 95 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 EGFP01133 1207 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 CEACAM1P13688 526 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 GABRR2P28476 465 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 TXKP42681 527 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 RARRES1P49788 294 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 SIM1P81133 766 aaPredicted RBP7.54□□□□□ -1.2
HDAC1-204ENST00000471488 POU5F1BQ06416 359 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 SOX4Q06945 474 aaPredicted RBP7.54□□□□□ -1.2
HDAC1-204ENST00000471488 CCINQ13939 588 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 PTPAQ15257 358 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 NAB2Q15742 525 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 ITPRIPL2Q3MIP1 535 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 DCAF4L1Q3SXM0 396 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 PLA2G2CQ5R387 149 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 ATF7IP2Q5U623 682 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 TPGS2Q68CL5 300 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 TRIM68Q6AZZ1 485 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 SLC8B1Q6J4K2 584 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 CPLX2Q6PUV4 134 aaKnown RBP7.54□□□□□ -1.2
HDAC1-204ENST00000471488 MOXD1Q6UVY6 613 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 CYP2U1Q7Z449 544 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 APBB1IPQ7Z5R6 666 aaPredicted RBP7.54□□□□□ -1.2
HDAC1-204ENST00000471488 USP37Q86T82 979 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 IFNLR1Q8IU57 520 aaPredicted RBP7.54□□□□□ -1.2
HDAC1-204ENST00000471488 SLFN12Q8IYM2 578 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 RPLP0P6Q8NHW5 317 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 BPIFB1Q8TDL5 484 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 HAS1Q92839 578 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 GATA6Q92908 595 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 C18orf25Q96B23 403 aaPredicted RBP7.54□□□□□ -1.2
HDAC1-204ENST00000471488 PRIMPOLQ96LW4 560 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 PPP1R10Q96QC0 940 aaKnown RBP7.54□□□□□ -1.2
HDAC1-204ENST00000471488 TCHPQ9BT92 498 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 CCDC94Q9BW85 323 aaPredicted RBP7.54□□□□□ -1.2
HDAC1-204ENST00000471488 GTPBP2Q9BX10 602 aaKnown RBP7.54□□□□□ -1.2
HDAC1-204ENST00000471488 GPR88Q9GZN0 384 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 EBF3Q9H4W6 596 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 KCNMB3Q9NPA1 279 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 TOPORSQ9NS56 1045 aaPredicted RBP7.54□□□□□ -1.2
HDAC1-204ENST00000471488 ANKEF1Q9NU02 776 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 PCDHA12Q9UN75 941 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 ZZEF1O43149 2961 aa7.54□□□□□ -1.2
HDAC1-204ENST00000471488 ZFYVE26Q68DK2 2539 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 COL4A2P08572 1712 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 SMIM28A0A1B0GU29 152 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 BCLAF3A2AJT9 711 aaKnown RBP7.53□□□□□ -1.2
HDAC1-204ENST00000471488 CCDC169A6NNP5 214 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 TMEM189-UBE2V1I3L0A0 370 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 MAP3K13O43283 966 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 MICAL2O94851 1124 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 PRAMEF12O95522 483 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 CFIP05156 583 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 GCFC2P16383 781 aaKnown RBP7.53□□□□□ -1.2
HDAC1-204ENST00000471488 XBP1P17861 261 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 PDIA3P30101 505 aaKnown RBP7.53□□□□□ -1.2
HDAC1-204ENST00000471488 RDXP35241 583 aaKnown RBP7.53□□□□□ -1.2
HDAC1-204ENST00000471488 MATR3P43243 847 aaKnown RBP eCLIP7.53□□□□□ -1.2
HDAC1-204ENST00000471488 ATXN3P54252 364 aaPredicted RBP7.53□□□□□ -1.2
HDAC1-204ENST00000471488 SEC13P55735 322 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 FCHO2Q0JRZ9 810 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 DUSP4Q13115 394 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 PLD1Q13393 1074 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 KARSQ15046 597 aaKnown RBP7.53□□□□□ -1.2
HDAC1-204ENST00000471488 NTRK3Q16288 839 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 CALCRLQ16602 461 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 ZNF568Q3ZCX4 644 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 PPP4R3CPQ6ZMV5 832 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 SYNPOQ8N3V7 929 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 CEP120Q8N960 986 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 LEMD2Q8NC56 503 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 APPL2Q8NEU8 664 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 OXER1Q8TDS5 423 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 HNRNPLLQ8WVV9 542 aaKnown RBP7.53□□□□□ -1.2
HDAC1-204ENST00000471488 IFT74Q96LB3 600 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 TBC1D32Q96NH3 1257 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 LRRC3BQ96PB8 259 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 SEPT5Q99719 369 aaPredicted RBP7.53□□□□□ -1.2
HDAC1-204ENST00000471488 NFKBIZQ9BYH8 718 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 TTC12Q9H892 705 aaPredicted RBP7.53□□□□□ -1.2
HDAC1-204ENST00000471488 TRPV4Q9HBA0 871 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 GKN1Q9NS71 199 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 SLC38A7Q9NVC3 462 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 AFF4Q9UHB7 1163 aaKnown RBP7.53□□□□□ -1.2
HDAC1-204ENST00000471488 ZMYM2Q9UBW7 1377 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 IGF2RP11717 2491 aa7.53□□□□□ -1.2
HDAC1-204ENST00000471488 ATXN2Q99700 1313 aaKnown RBP7.52□□□□□ -1.2
HDAC1-204ENST00000471488 ATG2BQ96BY7 2078 aa7.52□□□□□ -1.21
HDAC1-204ENST00000471488 KIF26AQ9ULI4 1882 aaPredicted RBP7.52□□□□□ -1.21
HDAC1-204ENST00000471488 ARHGEF35A5YM69 484 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms