RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 PLBD2Q8NHP8 589 aa6.91□□□□□ -1.3
CKS1B-204ENST00000471245 SLC7A6OSQ96CW6 309 aaPredicted RBP6.91□□□□□ -1.3
CKS1B-204ENST00000471245 IL17RAQ96F46 866 aa6.91□□□□□ -1.3
CKS1B-204ENST00000471245 MYD88Q99836 296 aa6.91□□□□□ -1.3
CKS1B-204ENST00000471245 ARPC5LQ9BPX5 153 aa6.91□□□□□ -1.3
CKS1B-204ENST00000471245 PDCD2LQ9BRP1 358 aa6.91□□□□□ -1.3
CKS1B-204ENST00000471245 CARD11Q9BXL7 1154 aa6.91□□□□□ -1.3
CKS1B-204ENST00000471245 LMBRD1Q9NUN5 540 aa6.91□□□□□ -1.3
CKS1B-204ENST00000471245 GPRC5DQ9NZD1 345 aa6.91□□□□□ -1.3
CKS1B-204ENST00000471245 TUBGCP6Q96RT7 1819 aa6.91□□□□□ -1.3
CKS1B-204ENST00000471245 CRB1P82279 1406 aa6.91□□□□□ -1.3
CKS1B-204ENST00000471245 NPIPB6E9PJ23 425 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 FTH1P19P0C7X4 201 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 GYPEP15421 78 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 RPL17P18621 184 aaKnown RBP6.9□□□□□ -1.3
CKS1B-204ENST00000471245 SERPINB3P29508 390 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 GUCY1A2P33402 732 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 KIR2DL3P43628 341 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 MRE11P49959 708 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 PER3P56645 1201 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 TLE1Q04724 770 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 IFIT5Q13325 482 aaKnown RBP6.9□□□□□ -1.3
CKS1B-204ENST00000471245 ADAM15Q13444 863 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 FGL2Q14314 439 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 ZNF124Q15973 351 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 SLC15A2Q16348 729 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 C10orf62Q5T681 223 aaPredicted RBP6.9□□□□□ -1.3
CKS1B-204ENST00000471245 CNKSR3Q6P9H4 555 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 LARP4Q71RC2 724 aaKnown RBP eCLIP6.9□□□□□ -1.3
CKS1B-204ENST00000471245 HEATR3Q7Z4Q2 680 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 RSPH3Q86UC2 560 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 FAM186BQ8IYM0 893 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 PQLC1Q8N2U9 271 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 IFI44Q8TCB0 444 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 PARD3BQ8TEW8 1205 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 CASKIN2Q8WXE0 1202 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 DACT3Q96B18 629 aaPredicted RBP6.9□□□□□ -1.3
CKS1B-204ENST00000471245 PGBD4Q96DM1 585 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 SLC35A4Q96G79 324 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 UHRF1Q96T88 793 aaPredicted RBP6.9□□□□□ -1.3
CKS1B-204ENST00000471245 C22orf23Q9BZE7 217 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 OR10A2Q9H208 303 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 NTMQ9P121 344 aa6.9□□□□□ -1.3
CKS1B-204ENST00000471245 PUF60Q9UHX1 559 aaKnown RBP6.9□□□□□ -1.3
CKS1B-204ENST00000471245 CPDO75976 1380 aa6.9□□□□□ -1.31
CKS1B-204ENST00000471245 MAP3K5Q99683 1374 aa6.9□□□□□ -1.31
CKS1B-204ENST00000471245 BTAF1O14981 1849 aa6.9□□□□□ -1.31
CKS1B-204ENST00000471245 SH3D21A4FU49 640 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 CFAP69A5D8W1 941 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 LRRC14BA6NHZ5 514 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 NRP1O14786 923 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 PHGDHO43175 533 aaKnown RBP6.89□□□□□ -1.31
CKS1B-204ENST00000471245 ITGA10O75578 1167 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 MYL3P08590 195 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 TYRP14679 529 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 ATP8B2P98198 1209 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 TXNRD1Q16881 649 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 VWA3BQ502W6 1294 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 AGBL4Q5VU57 503 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 APOA5Q6Q788 366 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 SRLQ86TD4 932 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 SIAH1Q8IUQ4 282 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 LILRA3Q8N6C8 439 aaPredicted RBP6.89□□□□□ -1.31
CKS1B-204ENST00000471245 GCDHQ92947 438 aaPredicted RBP6.89□□□□□ -1.31
CKS1B-204ENST00000471245 TMX3Q96JJ7 454 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 LRRC27Q9C0I9 530 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 TMEM168Q9H0V1 697 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 WDCPQ9H6R7 721 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 ATP6V0A4Q9HBG4 840 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 JADE2Q9NQC1 790 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 STK32BQ9NY57 414 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 DAAM1Q9Y4D1 1078 aa6.89□□□□□ -1.31
CKS1B-204ENST00000471245 BCL9O00512 1426 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 POLR3AO14802 1390 aaPredicted RBP6.88□□□□□ -1.31
CKS1B-204ENST00000471245 USP19O94966 1318 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 MYBBP1AQ9BQG0 1328 aaKnown RBP6.88□□□□□ -1.31
CKS1B-204ENST00000471245 C2orf78A6NCI8 922 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 FOXN3O00409 490 aaPredicted RBP6.88□□□□□ -1.31
CKS1B-204ENST00000471245 DDX3XO00571 662 aaKnown RBP eCLIP6.88□□□□□ -1.31
CKS1B-204ENST00000471245 GPR32O75388 356 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 AMY1AP04745 511 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 VSIG10L2P0DP72 767 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 MYF5P13349 255 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 ZKSCAN1P17029 563 aaPredicted RBP6.88□□□□□ -1.31
CKS1B-204ENST00000471245 SYN1P17600 705 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 CSF2RBP32927 897 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 PLS1Q14651 629 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 USP10Q14694 798 aaKnown RBP6.88□□□□□ -1.31
CKS1B-204ENST00000471245 SSPNQ14714 243 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 GPR162Q16538 588 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 GAGE13Q4V321 117 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 KHDC1Q4VXA5 237 aaKnown RBP6.88□□□□□ -1.31
CKS1B-204ENST00000471245 ZMAT1Q5H9K5 638 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 FAM26FQ5R3K3 315 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 CIAPIN1Q6FI81 312 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 GADL1Q6ZQY3 521 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 TRMT2AQ8IZ69 625 aaKnown RBP6.88□□□□□ -1.31
CKS1B-204ENST00000471245 KLHL36Q8N4N3 616 aa6.88□□□□□ -1.31
CKS1B-204ENST00000471245 ENAHQ8N8S7 591 aaPredicted RBP6.88□□□□□ -1.31
CKS1B-204ENST00000471245 CCHCR1Q8TD31 782 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms