RNA–Protein interactions for RNA: ENST00000468598.5

SFPQ-205, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 2,835 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-205ENST00000468598 TP73O15350 636 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 PRPF4O43172 522 aaKnown RBP eCLIP7.55□□□□□ -1.2
SFPQ-205ENST00000468598 THAP12O43422 761 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 GAS8O95995 478 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 FOSP01100 380 aaPredicted RBP7.55□□□□□ -1.2
SFPQ-205ENST00000468598 STAT3P40763 770 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 PEX19P40855 299 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 VEGFBP49765 207 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 RAD23BP54727 409 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 MXRA7P84157 204 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 KRT17Q04695 432 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 RNASELQ05823 741 aaKnown RBP7.55□□□□□ -1.2
SFPQ-205ENST00000468598 MPP2Q14168 576 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 PDCD2Q16342 344 aaPredicted RBP7.55□□□□□ -1.2
SFPQ-205ENST00000468598 UBAP2Q5T6F2 1119 aaKnown RBP7.55□□□□□ -1.2
SFPQ-205ENST00000468598 USP17L6PQ6QN14 398 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 FASTKD5Q7L8L6 764 aaKnown RBP7.55□□□□□ -1.2
SFPQ-205ENST00000468598 OTUD6AQ7L8S5 288 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 ANKLE1Q8NAG6 615 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 FAM13CQ8NE31 585 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 GJA10Q969M2 543 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 TRAPPC9Q96Q05 1148 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 NUDCD1Q96RS6 583 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 DDX23Q9BUQ8 820 aaKnown RBP7.55□□□□□ -1.2
SFPQ-205ENST00000468598 MYLK2Q9H1R3 596 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 SLC38A10Q9HBR0 1119 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 SEPT11Q9NVA2 429 aaKnown RBP7.55□□□□□ -1.2
SFPQ-205ENST00000468598 KCND2Q9NZV8 630 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 SYNPO2Q9UMS6 1093 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 TRIM33Q9UPN9 1127 aa7.55□□□□□ -1.2
SFPQ-205ENST00000468598 SMG5Q9UPR3 1016 aaKnown RBP7.55□□□□□ -1.2
SFPQ-205ENST00000468598 DPPA5A6NC42 116 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 FOXN3O00409 490 aaPredicted RBP7.54□□□□□ -1.2
SFPQ-205ENST00000468598 FAM13AO94988 1023 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 ACSL3O95573 720 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 HOXA13P31271 388 aaPredicted RBP7.54□□□□□ -1.2
SFPQ-205ENST00000468598 CIITAP33076 1130 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 PSMC6P62333 389 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 CENPCQ03188 943 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.54□□□□□ -1.2
SFPQ-205ENST00000468598 FBXO11Q86XK2 927 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 TDRPQ86YL5 185 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 LMO3Q8TAP4 145 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 GDAP1Q8TB36 358 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 DNAJC9Q8WXX5 260 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 RANBP17Q9H2T7 1088 aaKnown RBP7.54□□□□□ -1.2
SFPQ-205ENST00000468598 TUFT1Q9NNX1 390 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 PAPOLBQ9NRJ5 636 aaKnown RBP7.54□□□□□ -1.2
SFPQ-205ENST00000468598 EURLQ9NYK6 297 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 NINJ2Q9NZG7 142 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 RBPJLQ9UBG7 517 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 STOML1Q9UBI4 398 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 NKX1-2Q9UD57 310 aaPredicted RBP7.54□□□□□ -1.2
SFPQ-205ENST00000468598 GTF3C4Q9UKN8 822 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 CCPG1Q9ULG6 757 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 NAALADL1Q9UQQ1 740 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 RABGAP1Q9Y3P9 1069 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 PARP14Q460N5 1801 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 ENO4A6NNW6 628 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 NFIBO00712 420 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 SPOPO43791 374 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 SMIM24O75264 130 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 ASMTLO95671 621 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 ATF2P15336 505 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 CREB1P16220 341 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 IVDP26440 423 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 PTPN4P29074 926 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 MARCKSL1P49006 195 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 ARHGAP4P98171 946 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 SF3A3Q12874 501 aaKnown RBP eCLIP7.54□□□□□ -1.2
SFPQ-205ENST00000468598 SPARCL1Q14515 664 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 MESDQ14696 234 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 RASA2Q15283 850 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 CBWD6Q4V339 395 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 SGO2Q562F6 1265 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 SLC45A4Q5BKX6 768 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 CBWD3Q5JTY5 395 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 CBWD5Q5RIA9 395 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 SNRNP48Q6IEG0 339 aaKnown RBP7.54□□□□□ -1.2
SFPQ-205ENST00000468598 PHLDB3Q6NSJ2 640 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 RINT1Q6NUQ1 792 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 AADACL2Q6P093 401 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 LONP2Q86WA8 852 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 REPS2Q8NFH8 660 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 UIMC1Q96RL1 719 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 FAM167BQ9BTA0 163 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.54□□□□□ -1.2
SFPQ-205ENST00000468598 HOXC10Q9NYD6 342 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 ASIC3Q9UHC3 531 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 CPA4Q9UI42 421 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 ANAPC5Q9UJX4 755 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 ZNF214Q9UL59 606 aaPredicted RBP7.54□□□□□ -1.2
SFPQ-205ENST00000468598 PTPN22Q9Y2R2 807 aa7.54□□□□□ -1.2
SFPQ-205ENST00000468598 UNCXA6NJT0 531 aa7.53□□□□□ -1.2
SFPQ-205ENST00000468598 EXOC3O60645 756 aa7.53□□□□□ -1.2
SFPQ-205ENST00000468598 CNMDO75829 334 aa7.53□□□□□ -1.2
SFPQ-205ENST00000468598 GH1P01241 217 aa7.53□□□□□ -1.2
SFPQ-205ENST00000468598 FOXN2P32314 431 aa7.53□□□□□ -1.2
SFPQ-205ENST00000468598 RAB27AP51159 221 aa7.53□□□□□ -1.2
SFPQ-205ENST00000468598 MCCD1P59942 119 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms