RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 CHADLQ6NUI6 762 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 PHF13Q86YI8 300 aaPredicted RBP19.46■□□□□ 0.71
SYNE4-204ENST00000465425 EXD1Q8NHP7 514 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 FAM118BQ9BPY3 351 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 ELAC2Q9BQ52 826 aaKnown RBP19.46■□□□□ 0.71
SYNE4-204ENST00000465425 SLC40A1Q9NP59 571 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 PARVAQ9NVD7 372 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 GJA3Q9Y6H8 435 aa19.46■□□□□ 0.71
SYNE4-204ENST00000465425 DOCK5Q9H7D0 1870 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 ATP4AP20648 1035 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 C1QBPQ07021 282 aaKnown RBP19.45■□□□□ 0.7
SYNE4-204ENST00000465425 SF3A3Q12874 501 aaKnown RBP eCLIP19.45■□□□□ 0.7
SYNE4-204ENST00000465425 NCOA4Q13772 614 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 ZBTB41Q5SVQ8 909 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 PLEKHA7Q6IQ23 1121 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 PIGWQ7Z7B1 504 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 MGARPQ8TDB4 240 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 KLC4Q9NSK0 619 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 FZD1Q9UP38 647 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 COL11A1P12107 1806 aaPredicted RBP19.45■□□□□ 0.7
SYNE4-204ENST00000465425 PARP14Q460N5 1801 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 ZNF541Q9H0D2 1346 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 PHIPQ8WWQ0 1821 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 DOCK1Q14185 1865 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 A0A0B4J269 797 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 TMEM120BA0PK00 339 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 CCT8L1PA6NM43 557 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 GHRP10912 638 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 LRRC14Q15048 493 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 PRAMEF18Q5VWM3 479 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 ZNF526Q8TF50 670 aaPredicted RBP19.45■□□□□ 0.7
SYNE4-204ENST00000465425 KCNK9Q9NPC2 374 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 ZNF112Q9UJU3 913 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 NUB1Q9Y5A7 615 aa19.45■□□□□ 0.7
SYNE4-204ENST00000465425 GSTTP1A0A1W2PQM5 241 aa19.44■□□□□ 0.7
SYNE4-204ENST00000465425 RASSF9O75901 435 aa19.44■□□□□ 0.7
SYNE4-204ENST00000465425 ARL2P36404 184 aa19.44■□□□□ 0.7
SYNE4-204ENST00000465425 CATSPERGQ6ZRH7 1159 aa19.44■□□□□ 0.7
SYNE4-204ENST00000465425 FEZF2Q8TBJ5 459 aa19.44■□□□□ 0.7
SYNE4-204ENST00000465425 HOXC10Q9NYD6 342 aa19.44■□□□□ 0.7
SYNE4-204ENST00000465425 MYH9P35579 1960 aaKnown RBP19.44■□□□□ 0.7
SYNE4-204ENST00000465425 LMNB2Q03252 620 aa19.43■□□□□ 0.7
SYNE4-204ENST00000465425 IZUMO3Q5VZ72 239 aa19.43■□□□□ 0.7
SYNE4-204ENST00000465425 SEPT14Q6ZU15 432 aa19.43■□□□□ 0.7
SYNE4-204ENST00000465425 OR5B17Q8NGF7 314 aa19.43■□□□□ 0.7
SYNE4-204ENST00000465425 KCNN1Q92952 543 aa19.43■□□□□ 0.7
SYNE4-204ENST00000465425 CCDC77Q9BR77 488 aa19.43■□□□□ 0.7
SYNE4-204ENST00000465425 MTFR1LQ9H019 292 aa19.43■□□□□ 0.7
SYNE4-204ENST00000465425 NINJ2Q9NZG7 142 aa19.43■□□□□ 0.7
SYNE4-204ENST00000465425 CTNNAL1Q9UBT7 734 aa19.43■□□□□ 0.7
SYNE4-204ENST00000465425 IP6K2Q9UHH9 426 aa19.43■□□□□ 0.7
SYNE4-204ENST00000465425 SEZ6Q53EL9 994 aa19.43■□□□□ 0.7
SYNE4-204ENST00000465425 CNTN6Q9UQ52 1028 aa19.43■□□□□ 0.7
SYNE4-204ENST00000465425 ATG7O95352 703 aa19.42■□□□□ 0.7
SYNE4-204ENST00000465425 NFX1Q12986 1120 aaKnown RBP19.42■□□□□ 0.7
SYNE4-204ENST00000465425 ANKRD35Q8N283 1001 aa19.42■□□□□ 0.7
SYNE4-204ENST00000465425 DNERQ8NFT8 737 aa19.42■□□□□ 0.7
SYNE4-204ENST00000465425 ZNF606Q8WXB4 792 aa19.42■□□□□ 0.7
SYNE4-204ENST00000465425 RBM41Q96IZ5 413 aaKnown RBP19.42■□□□□ 0.7
SYNE4-204ENST00000465425 PWWP2AQ96N64 755 aa19.42■□□□□ 0.7
SYNE4-204ENST00000465425 NEU2Q9Y3R4 380 aa19.42■□□□□ 0.7
SYNE4-204ENST00000465425 CNTNAP2Q9UHC6 1331 aa19.42■□□□□ 0.7
SYNE4-204ENST00000465425 GJB6O95452 261 aa19.42■□□□□ 0.7
SYNE4-204ENST00000465425 ATF7P17544 494 aaPredicted RBP19.42■□□□□ 0.7
SYNE4-204ENST00000465425 KAZNQ674X7 775 aa19.42■□□□□ 0.7
SYNE4-204ENST00000465425 CEP128Q6ZU80 1094 aa19.42■□□□□ 0.7
SYNE4-204ENST00000465425 ANKRD42Q8N9B4 389 aa19.42■□□□□ 0.7
SYNE4-204ENST00000465425 TMEM134Q9H6X4 195 aa19.42■□□□□ 0.7
SYNE4-204ENST00000465425 KLHL11Q9NVR0 708 aa19.42■□□□□ 0.7
SYNE4-204ENST00000465425 TBK1Q9UHD2 729 aa19.42■□□□□ 0.7
SYNE4-204ENST00000465425 SPDYE16A6NNV3 312 aaPredicted RBP19.41■□□□□ 0.7
SYNE4-204ENST00000465425 CDH16O75309 829 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 TCEA3O75764 348 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 BRAFP15056 766 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 ICAM3P32942 547 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 RFC5P40937 340 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 TGFB2P61812 414 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 P3H1Q32P28 736 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 CCHCR1Q8TD31 782 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 TCHPQ9BT92 498 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 NIFKQ9BYG3 293 aaKnown RBP19.41■□□□□ 0.7
SYNE4-204ENST00000465425 MAF1Q9H063 256 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 HAUS2Q9NVX0 235 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 CD2APQ9Y5K6 639 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 ADGRA2Q96PE1 1338 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 NFKBIEO00221 500 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 CREB1P16220 341 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 MMP8P22894 467 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 RPL7AP62424 266 aaKnown RBP19.41■□□□□ 0.7
SYNE4-204ENST00000465425 VSTM1Q6UX27 236 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 RCOR2Q8IZ40 523 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 FUKQ8N0W3 1084 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 SLC16A10Q8TF71 515 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 NRBP2Q9NSY0 501 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 RLFQ13129 1914 aa19.41■□□□□ 0.7
SYNE4-204ENST00000465425 TCP11X1B4DZS4 312 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 PI4K2BG5E9Z4 385 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 TJP3O95049 919 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 CALB1P05937 261 aa19.4■□□□□ 0.7
SYNE4-204ENST00000465425 NF2P35240 595 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms