RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 PTGDRQ13258 359 aa22.64■■□□□ 1.21
CPSF7-209ENST00000463244 NOLC1Q14978 699 aaKnown RBP eCLIP22.64■■□□□ 1.21
CPSF7-209ENST00000463244 TEAD2Q15562 447 aa22.64■■□□□ 1.21
CPSF7-209ENST00000463244 CELF5Q8N6W0 485 aaKnown RBP22.64■■□□□ 1.21
CPSF7-209ENST00000463244 BEST2Q8NFU1 509 aa22.64■■□□□ 1.21
CPSF7-209ENST00000463244 NTPCRQ9BSD7 190 aaKnown RBP22.64■■□□□ 1.21
CPSF7-209ENST00000463244 GPR88Q9GZN0 384 aa22.64■■□□□ 1.21
CPSF7-209ENST00000463244 ANKFY1Q9P2R3 1169 aa22.64■■□□□ 1.21
CPSF7-209ENST00000463244 RAB23Q9ULC3 237 aa22.64■■□□□ 1.21
CPSF7-209ENST00000463244 LIMCH1Q9UPQ0 1083 aa22.64■■□□□ 1.21
CPSF7-209ENST00000463244 ZFHX4Q86UP3 3567 aa22.64■■□□□ 1.21
CPSF7-209ENST00000463244 RALGAPA1Q6GYQ0 2036 aa22.64■■□□□ 1.21
CPSF7-209ENST00000463244 PP2D1A8MPX8 630 aa22.63■■□□□ 1.21
CPSF7-209ENST00000463244 HEPACAM2A8MVW5 462 aa22.63■■□□□ 1.21
CPSF7-209ENST00000463244 M0QZQ0 153 aa22.63■■□□□ 1.21
CPSF7-209ENST00000463244 CHRNB1P11230 501 aa22.63■■□□□ 1.21
CPSF7-209ENST00000463244 MARCKSP29966 332 aaPredicted RBP22.63■■□□□ 1.21
CPSF7-209ENST00000463244 MLLT6P55198 1093 aaPredicted RBP22.63■■□□□ 1.21
CPSF7-209ENST00000463244 LPAL2Q16609 132 aa22.63■■□□□ 1.21
CPSF7-209ENST00000463244 SEZ6Q53EL9 994 aa22.63■■□□□ 1.21
CPSF7-209ENST00000463244 KRT79Q5XKE5 535 aa22.63■■□□□ 1.21
CPSF7-209ENST00000463244 LAIR1Q6GTX8 287 aa22.63■■□□□ 1.21
CPSF7-209ENST00000463244 SHKBP1Q8TBC3 707 aa22.63■■□□□ 1.21
CPSF7-209ENST00000463244 E2F7Q96AV8 911 aa22.63■■□□□ 1.21
CPSF7-209ENST00000463244 YIPF1Q9Y548 306 aa22.63■■□□□ 1.21
CPSF7-209ENST00000463244 SFI1A8K8P3 1242 aa22.62■■□□□ 1.21
CPSF7-209ENST00000463244 OAZ2O95190 189 aa22.62■■□□□ 1.21
CPSF7-209ENST00000463244 VNN2O95498 520 aa22.62■■□□□ 1.21
CPSF7-209ENST00000463244 CCNE1P24864 410 aa22.62■■□□□ 1.21
CPSF7-209ENST00000463244 TOB1P50616 345 aaPredicted RBP22.62■■□□□ 1.21
CPSF7-209ENST00000463244 SATB1Q01826 763 aa22.62■■□□□ 1.21
CPSF7-209ENST00000463244 YWHAHQ04917 246 aaPredicted RBP22.62■■□□□ 1.21
CPSF7-209ENST00000463244 SPEM2Q0P670 501 aa22.62■■□□□ 1.21
CPSF7-209ENST00000463244 STRN3Q13033 797 aa22.62■■□□□ 1.21
CPSF7-209ENST00000463244 GAS6Q14393 721 aa22.62■■□□□ 1.21
CPSF7-209ENST00000463244 KCNK18Q7Z418 384 aa22.62■■□□□ 1.21
CPSF7-209ENST00000463244 SPIRE2Q8WWL2 714 aa22.62■■□□□ 1.21
CPSF7-209ENST00000463244 RSPRY1Q96DX4 576 aa22.62■■□□□ 1.21
CPSF7-209ENST00000463244 TIPINQ9BVW5 301 aa22.62■■□□□ 1.21
CPSF7-209ENST00000463244 LRRC3Q9BY71 257 aa22.62■■□□□ 1.21
CPSF7-209ENST00000463244 SLITRK6Q9H5Y7 841 aa22.62■■□□□ 1.21
CPSF7-209ENST00000463244 PCDHB6Q9Y5E3 794 aa22.62■■□□□ 1.21
CPSF7-209ENST00000463244 DCDC2BA2VCK2 349 aa22.61■■□□□ 1.21
CPSF7-209ENST00000463244 GUCY2CP25092 1073 aa22.61■■□□□ 1.21
CPSF7-209ENST00000463244 U2AF2P26368 475 aaKnown RBP eCLIP22.61■■□□□ 1.212e-8■□□□□ 10
CPSF7-209ENST00000463244 CDC25AP30304 524 aa22.61■■□□□ 1.21
CPSF7-209ENST00000463244 CXCL12P48061 93 aa22.61■■□□□ 1.21
CPSF7-209ENST00000463244 HMGN5P82970 282 aaKnown RBP22.61■■□□□ 1.21
CPSF7-209ENST00000463244 IL17AQ16552 155 aa22.61■■□□□ 1.21
CPSF7-209ENST00000463244 TMC8Q8IU68 726 aa22.61■■□□□ 1.21
CPSF7-209ENST00000463244 TMEM130Q8N3G9 435 aa22.61■■□□□ 1.21
CPSF7-209ENST00000463244 TMEM161BQ8NDZ6 487 aa22.61■■□□□ 1.21
CPSF7-209ENST00000463244 MSANTD3Q96H12 275 aa22.61■■□□□ 1.21
CPSF7-209ENST00000463244 MMTAG2Q9BU76 263 aaKnown RBP22.61■■□□□ 1.21
CPSF7-209ENST00000463244 OXCT2Q9BYC2 517 aaPredicted RBP22.61■■□□□ 1.21
CPSF7-209ENST00000463244 LRP3O75074 770 aa22.6■■□□□ 1.21
CPSF7-209ENST00000463244 RETP07949 1114 aa22.6■■□□□ 1.21
CPSF7-209ENST00000463244 CXCL8P10145 99 aa22.6■■□□□ 1.21
CPSF7-209ENST00000463244 MAPTP10636 758 aaKnown RBP22.6■■□□□ 1.21
CPSF7-209ENST00000463244 LRPAP1P30533 357 aa22.6■■□□□ 1.21
CPSF7-209ENST00000463244 AARSP49588 968 aaKnown RBP eCLIP22.6■■□□□ 1.21
CPSF7-209ENST00000463244 MCL1Q07820 350 aa22.6■■□□□ 1.21
CPSF7-209ENST00000463244 FCHO2Q0JRZ9 810 aa22.6■■□□□ 1.21
CPSF7-209ENST00000463244 PLD1Q13393 1074 aa22.6■■□□□ 1.21
CPSF7-209ENST00000463244 C1orf228Q6PIY5 440 aa22.6■■□□□ 1.21
CPSF7-209ENST00000463244 ZPBP2Q6X784 338 aa22.6■■□□□ 1.21
CPSF7-209ENST00000463244 PRR23BQ6ZRT6 265 aa22.6■■□□□ 1.21
CPSF7-209ENST00000463244 SPEM1Q8N4L4 309 aa22.6■■□□□ 1.21
CPSF7-209ENST00000463244 CSGALNACT1Q8TDX6 532 aa22.6■■□□□ 1.21
CPSF7-209ENST00000463244 DNAJC25Q9H1X3 360 aa22.6■■□□□ 1.21
CPSF7-209ENST00000463244 CRISPLD1Q9H336 500 aa22.6■■□□□ 1.21
CPSF7-209ENST00000463244 PLEKHA5Q9HAU0 1116 aa22.6■■□□□ 1.21
CPSF7-209ENST00000463244 TIMM13Q9Y5L4 95 aaPredicted RBP22.6■■□□□ 1.21
CPSF7-209ENST00000463244 NUP210Q8TEM1 1887 aaPredicted RBP22.6■■□□□ 1.21
CPSF7-209ENST00000463244 SDK1Q7Z5N4 2213 aa22.59■■□□□ 1.21
CPSF7-209ENST00000463244 CFAP47Q6ZTR5 3102 aa22.59■■□□□ 1.21
CPSF7-209ENST00000463244 A0A1W2PRU2 124 aa22.59■■□□□ 1.21
CPSF7-209ENST00000463244 LAD1O00515 517 aa22.59■■□□□ 1.21
CPSF7-209ENST00000463244 CHADO15335 359 aa22.59■■□□□ 1.21
CPSF7-209ENST00000463244 CLDN3O15551 220 aa22.59■■□□□ 1.21
CPSF7-209ENST00000463244 OR4Q2P0C623 313 aa22.59■■□□□ 1.21
CPSF7-209ENST00000463244 PLS3P13797 630 aa22.59■■□□□ 1.21
CPSF7-209ENST00000463244 PRPHP41219 470 aa22.59■■□□□ 1.21
CPSF7-209ENST00000463244 SPAG1Q07617 926 aa22.59■■□□□ 1.21
CPSF7-209ENST00000463244 YAF2Q8IY57 180 aa22.59■■□□□ 1.21
CPSF7-209ENST00000463244 FAM184AQ8NB25 1140 aa22.59■■□□□ 1.21
CPSF7-209ENST00000463244 PGLYRP2Q96PD5 576 aa22.59■■□□□ 1.21
CPSF7-209ENST00000463244 HAPLN2Q9GZV7 340 aa22.59■■□□□ 1.21
CPSF7-209ENST00000463244 C8orf33Q9H7E9 229 aaPredicted RBP22.59■■□□□ 1.21
CPSF7-209ENST00000463244 KCNG1Q9UIX4 513 aa22.59■■□□□ 1.21
CPSF7-209ENST00000463244 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.59■■□□□ 1.21
CPSF7-209ENST00000463244 TTC26A0AVF1 554 aa22.58■■□□□ 1.21
CPSF7-209ENST00000463244 PAPSS2O95340 614 aaPredicted RBP22.58■■□□□ 1.21
CPSF7-209ENST00000463244 CYP3A5P20815 502 aa22.58■■□□□ 1.21
CPSF7-209ENST00000463244 SMTNP53814 917 aa22.58■■□□□ 1.21
CPSF7-209ENST00000463244 EPHB3P54753 998 aa22.58■■□□□ 1.21
CPSF7-209ENST00000463244 RAD51AP2Q09MP3 1159 aa22.58■■□□□ 1.21
CPSF7-209ENST00000463244 DUSP4Q13115 394 aa22.58■■□□□ 1.21
CPSF7-209ENST00000463244 GPR17Q13304 367 aa22.58■■□□□ 1.21
CPSF7-209ENST00000463244 LRRC32Q14392 662 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms