RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 TAAR1Q96RJ0 339 aa9.15□□□□□ -0.94
ECHDC1-212ENST00000461239 ALG1Q9BT22 464 aa9.15□□□□□ -0.94
ECHDC1-212ENST00000461239 CELF4Q9BZC1 486 aaKnown RBP9.15□□□□□ -0.94
ECHDC1-212ENST00000461239 CDIP1Q9H305 208 aa9.15□□□□□ -0.94
ECHDC1-212ENST00000461239 PPARGC1AQ9UBK2 798 aaKnown RBP9.15□□□□□ -0.94
ECHDC1-212ENST00000461239 PNMA2Q9UL42 364 aa9.15□□□□□ -0.94
ECHDC1-212ENST00000461239 G3BP2Q9UN86 482 aaKnown RBP9.15□□□□□ -0.94
ECHDC1-212ENST00000461239 COQ6Q9Y2Z9 468 aa9.15□□□□□ -0.94
ECHDC1-212ENST00000461239 MRPL11Q9Y3B7 192 aaKnown RBP9.15□□□□□ -0.94
ECHDC1-212ENST00000461239 PCDHA2Q9Y5H9 948 aa9.15□□□□□ -0.94
ECHDC1-212ENST00000461239 PLXNA1Q9UIW2 1896 aa9.15□□□□□ -0.95
ECHDC1-212ENST00000461239 RPTORQ8N122 1335 aa9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 ZNF891A8MT65 544 aaPredicted RBP9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 PRPF3O43395 683 aaKnown RBP9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 CFBP00751 764 aa9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 EN2P19622 333 aaPredicted RBP9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 PTGS1P23219 599 aa9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 EDNRBP24530 442 aa9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 ALDH5A1P51649 535 aaPredicted RBP9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 GUCY2FP51841 1108 aa9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 SOX10P56693 466 aa9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 UBXN2AP68543 259 aa9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 DSG1Q02413 1049 aa9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 LAPTM5Q13571 262 aa9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 PFKFB3Q16875 520 aaPredicted RBP9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 RNF219Q5W0B1 726 aaPredicted RBP9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 USP17L6PQ6QN14 398 aa9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 ARMCX2Q7L311 632 aa9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 NECAB2Q7Z6G3 386 aa9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 OR2W6PQ8NHA6 318 aa9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 FCRL2Q96LA5 508 aaPredicted RBP9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 AIFM3Q96NN9 605 aa9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 CEP89Q96ST8 783 aa9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 IPPKQ9H8X2 491 aa9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 SLC5A4Q9NY91 659 aa9.14□□□□□ -0.95
ECHDC1-212ENST00000461239 MYH6P13533 1939 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 CCDC196A0A1B0GTZ2 297 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 C7orf72A4D263 438 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 NEMP1O14524 444 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 SOD2P04179 222 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 GJB1P08034 283 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 SRGAP2CP0DJJ0 459 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 FDPSP14324 419 aaKnown RBP9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 RPL10P27635 214 aaKnown RBP9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 MECP2P51608 486 aaKnown RBP9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 ANKRD1Q15327 319 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 UBE2SQ16763 222 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 RSPO4Q2I0M5 234 aaPredicted RBP9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 MFSD14CQ5VZR4 134 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 TAPT1Q6NXT6 567 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 HEATR3Q7Z4Q2 680 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 MSL3Q8N5Y2 521 aaKnown RBP9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 NAT16Q8N8M0 369 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 IL31RAQ8NI17 732 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 USP7Q93009 1102 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 GTF3C6Q969F1 213 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 DEFB118Q96PH6 123 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 TTC1Q99614 292 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 SLC26A6Q9BXS9 759 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 RNF26Q9BY78 433 aaPredicted RBP9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 MAF1Q9H063 256 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 IFT22Q9H7X7 185 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 PDGFCQ9NRA1 345 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 BARHL2Q9NY43 387 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 SEC63Q9UGP8 760 aaKnown RBP9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 MCM3APO60318 1980 aa9.13□□□□□ -0.95
ECHDC1-212ENST00000461239 FRMPD4Q14CM0 1322 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 LRRC37A2A6NM11 1700 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 EDIL3O43854 480 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 JAK2O60674 1132 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 KATNA1O75449 491 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 SGPL1O95470 568 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 F2P00734 622 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 SCG2P13521 617 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 GRK2P25098 689 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 GRK3P35626 688 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 ID4P47928 161 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 ACVR2BQ13705 512 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 RABEP1Q15276 862 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 NPY5RQ15761 445 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 TMEM177Q53S58 311 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 ANO1Q5XXA6 986 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 UBE2Q1Q7Z7E8 422 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 KRTAP1-3Q8IUG1 177 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 FBXO16Q8IX29 292 aaPredicted RBP9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 NXPE1Q8N323 547 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 NSUN7Q8NE18 718 aaKnown RBP9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 DNERQ8NFT8 737 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 U2AF1L4Q8WU68 220 aaKnown RBP9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 HRASLS5Q96KN8 279 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 PDCD2LQ9BRP1 358 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 PXMP2Q9NR77 195 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 GJB4Q9NTQ9 266 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 MAP3K20Q9NYL2 800 aaKnown RBP9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 NRBP1Q9UHY1 535 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 LIMCH1Q9UPQ0 1083 aa9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 TIMM13Q9Y5L4 95 aaPredicted RBP9.12□□□□□ -0.95
ECHDC1-212ENST00000461239 ASB14A6NK59 587 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms