RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 VPS45Q9NRW7 570 aa18.87■□□□□ 0.61
TOP3A-202ENST00000461127 C2orf42Q9NWW7 574 aa18.87■□□□□ 0.61
TOP3A-202ENST00000461127 IGF2RP11717 2491 aa18.86■□□□□ 0.61
TOP3A-202ENST00000461127 ASPMQ8IZT6 3477 aa18.86■□□□□ 0.61
TOP3A-202ENST00000461127 ZZEF1O43149 2961 aa18.86■□□□□ 0.61
TOP3A-202ENST00000461127 TMEM8BA6NDV4 472 aa18.86■□□□□ 0.61
TOP3A-202ENST00000461127 AKAP3O75969 853 aa18.86■□□□□ 0.61
TOP3A-202ENST00000461127 TXKP42681 527 aa18.86■□□□□ 0.61
TOP3A-202ENST00000461127 PLD1Q13393 1074 aa18.86■□□□□ 0.61
TOP3A-202ENST00000461127 MRPL58Q14197 206 aaKnown RBP18.86■□□□□ 0.61
TOP3A-202ENST00000461127 WDR44Q5JSH3 913 aa18.86■□□□□ 0.61
TOP3A-202ENST00000461127 SHKBP1Q8TBC3 707 aa18.86■□□□□ 0.61
TOP3A-202ENST00000461127 OXER1Q8TDS5 423 aa18.86■□□□□ 0.61
TOP3A-202ENST00000461127 BSNDQ8WZ55 320 aa18.86■□□□□ 0.61
TOP3A-202ENST00000461127 A0A1W2PRU2 124 aa18.85■□□□□ 0.61
TOP3A-202ENST00000461127 ATG13O75143 517 aa18.85■□□□□ 0.61
TOP3A-202ENST00000461127 HOXB3P14651 431 aaPredicted RBP18.85■□□□□ 0.61
TOP3A-202ENST00000461127 RPL9P32969 192 aaKnown RBP18.85■□□□□ 0.61
TOP3A-202ENST00000461127 SOX4Q06945 474 aaPredicted RBP18.85■□□□□ 0.61
TOP3A-202ENST00000461127 DAB2IPQ5VWQ8 1189 aa18.85■□□□□ 0.61
TOP3A-202ENST00000461127 ARID3BQ8IVW6 561 aaPredicted RBP18.85■□□□□ 0.61
TOP3A-202ENST00000461127 TTC8Q8TAM2 541 aa18.85■□□□□ 0.61
TOP3A-202ENST00000461127 RSPRY1Q96DX4 576 aa18.85■□□□□ 0.61
TOP3A-202ENST00000461127 IFT74Q96LB3 600 aa18.85■□□□□ 0.61
TOP3A-202ENST00000461127 NACC1Q96RE7 527 aa18.85■□□□□ 0.61
TOP3A-202ENST00000461127 BRMS1Q9HCU9 246 aa18.85■□□□□ 0.61
TOP3A-202ENST00000461127 GTSE1Q9NYZ3 720 aa18.85■□□□□ 0.61
TOP3A-202ENST00000461127 SLC8A2Q9UPR5 921 aa18.85■□□□□ 0.61
TOP3A-202ENST00000461127 CYP46A1Q9Y6A2 500 aa18.85■□□□□ 0.61
TOP3A-202ENST00000461127 EXTL3O43909 919 aa18.84■□□□□ 0.61
TOP3A-202ENST00000461127 NEMFO60524 1076 aa18.84■□□□□ 0.61
TOP3A-202ENST00000461127 EDN1P05305 212 aa18.84■□□□□ 0.61
TOP3A-202ENST00000461127 MARCKSP29966 332 aaPredicted RBP18.84■□□□□ 0.61
TOP3A-202ENST00000461127 PXNP49023 591 aaPredicted RBP18.84■□□□□ 0.61
TOP3A-202ENST00000461127 EPHB3P54753 998 aa18.84■□□□□ 0.61
TOP3A-202ENST00000461127 PLCB2Q00722 1185 aa18.84■□□□□ 0.61
TOP3A-202ENST00000461127 FOXC1Q12948 553 aa18.84■□□□□ 0.61
TOP3A-202ENST00000461127 PTPAQ15257 358 aa18.84■□□□□ 0.61
TOP3A-202ENST00000461127 ZC3H10Q96K80 434 aaKnown RBP18.84■□□□□ 0.61
TOP3A-202ENST00000461127 SUSD3Q96L08 255 aa18.84■□□□□ 0.61
TOP3A-202ENST00000461127 EDEM2Q9BV94 578 aa18.84■□□□□ 0.61
TOP3A-202ENST00000461127 SMOC1Q9H4F8 434 aa18.84■□□□□ 0.61
TOP3A-202ENST00000461127 TUFT1Q9NNX1 390 aa18.84■□□□□ 0.61
TOP3A-202ENST00000461127 TPCN1Q9ULQ1 816 aa18.84■□□□□ 0.61
TOP3A-202ENST00000461127 YIPF1Q9Y548 306 aa18.84■□□□□ 0.61
TOP3A-202ENST00000461127 ARHGEF35A5YM69 484 aa18.83■□□□□ 0.6
TOP3A-202ENST00000461127 MCM4P33991 863 aa18.83■□□□□ 0.6
TOP3A-202ENST00000461127 GRM5P41594 1212 aa18.83■□□□□ 0.6
TOP3A-202ENST00000461127 ZNF252P-AS1Q0IIN9 211 aa18.83■□□□□ 0.6
TOP3A-202ENST00000461127 ELF2Q15723 593 aa18.83■□□□□ 0.6
TOP3A-202ENST00000461127 XKR4Q5GH76 650 aa18.83■□□□□ 0.6
TOP3A-202ENST00000461127 EARS2Q5JPH6 523 aaKnown RBP18.83■□□□□ 0.6
TOP3A-202ENST00000461127 NT5DC1Q5TFE4 455 aa18.83■□□□□ 0.6
TOP3A-202ENST00000461127 PADI6Q6TGC4 694 aa18.83■□□□□ 0.6
TOP3A-202ENST00000461127 RNF19BQ6ZMZ0 732 aa18.83■□□□□ 0.6
TOP3A-202ENST00000461127 ZFYVE19Q96K21 471 aa18.83■□□□□ 0.6
TOP3A-202ENST00000461127 OBP2AQ9NY56 170 aa18.83■□□□□ 0.6
TOP3A-202ENST00000461127 TNFSF13BQ9Y275 285 aa18.83■□□□□ 0.6
TOP3A-202ENST00000461127 STK36Q9NRP7 1315 aa18.82■□□□□ 0.6
TOP3A-202ENST00000461127 LAMA1P25391 3075 aa18.82■□□□□ 0.6
TOP3A-202ENST00000461127 CYP11B2P19099 503 aa18.82■□□□□ 0.6
TOP3A-202ENST00000461127 HOXC13P31276 330 aa18.82■□□□□ 0.6
TOP3A-202ENST00000461127 KRT2P35908 639 aa18.82■□□□□ 0.6
TOP3A-202ENST00000461127 ALDH1A3P47895 512 aa18.82■□□□□ 0.6
TOP3A-202ENST00000461127 OSTNP61366 133 aa18.82■□□□□ 0.6
TOP3A-202ENST00000461127 ARHGAP15Q53QZ3 475 aa18.82■□□□□ 0.6
TOP3A-202ENST00000461127 ALKAL1Q6UXT8 129 aa18.82■□□□□ 0.6
TOP3A-202ENST00000461127 CAMKK1Q8N5S9 505 aa18.82■□□□□ 0.6
TOP3A-202ENST00000461127 DDX12PQ92771 950 aa18.82■□□□□ 0.6
TOP3A-202ENST00000461127 TMEM209Q96SK2 561 aa18.82■□□□□ 0.6
TOP3A-202ENST00000461127 LARP6Q9BRS8 491 aaKnown RBP18.82■□□□□ 0.6
TOP3A-202ENST00000461127 KIFC3Q9BVG8 833 aa18.82■□□□□ 0.6
TOP3A-202ENST00000461127 OXCT2Q9BYC2 517 aaPredicted RBP18.82■□□□□ 0.6
TOP3A-202ENST00000461127 ADAM33Q9BZ11 813 aa18.82■□□□□ 0.6
TOP3A-202ENST00000461127 ZSWIM6Q9HCJ5 1215 aa18.82■□□□□ 0.6
TOP3A-202ENST00000461127 GJB4Q9NTQ9 266 aa18.82■□□□□ 0.6
TOP3A-202ENST00000461127 THG1LQ9NWX6 298 aaKnown RBP18.82■□□□□ 0.6
TOP3A-202ENST00000461127 SPEGQ15772 3267 aa18.82■□□□□ 0.6
TOP3A-202ENST00000461127 FAM205CA6NFA0 338 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 C4orf47A7E2U8 309 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 K7ERI5 159 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 FGF19O95750 216 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 SPATA31C1P0DKV0 1188 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 KCNE1P15382 129 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 ANAPC15P60006 121 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 GRSF1Q12849 480 aaKnown RBP eCLIP18.81■□□□□ 0.6
TOP3A-202ENST00000461127 NR5A1Q13285 461 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 ITPRIPL2Q3MIP1 535 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 ZNF568Q3ZCX4 644 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 TCEAL6Q6IPX3 200 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 CATSPER3Q86XQ3 398 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 TMC8Q8IU68 726 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 GPIHBP1Q8IV16 184 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 CEP120Q8N960 986 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 WASF1Q92558 559 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 TCEAL3Q969E4 200 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 ACAP3Q96P50 834 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 ATXN3LQ9H3M9 355 aa18.81■□□□□ 0.6
TOP3A-202ENST00000461127 RHOBTB1O94844 696 aa18.8■□□□□ 0.6
TOP3A-202ENST00000461127 YWHAHQ04917 246 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms