RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 SEC24AO95486 1093 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 XRCC6P12956 609 aaKnown RBP eCLIP8.64□□□□□ -1.036e-6■■■■■ 31.4
HPS4-207ENST00000459918 MATR3P43243 847 aaKnown RBP eCLIP8.64□□□□□ -1.03
HPS4-207ENST00000459918 ALDH1A3P47895 512 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 PXNP49023 591 aaPredicted RBP8.64□□□□□ -1.03
HPS4-207ENST00000459918 EPHB3P54753 998 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 SCRN1Q12765 414 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 FOXC1Q12948 553 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 COL9A2Q14055 689 aaPredicted RBP8.64□□□□□ -1.03
HPS4-207ENST00000459918 TAF12Q16514 161 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 ARHGAP15Q53QZ3 475 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 EARS2Q5JPH6 523 aaKnown RBP8.64□□□□□ -1.03
HPS4-207ENST00000459918 STPG1Q5TH74 334 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 RNF43Q68DV7 783 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 CENPQQ7L2Z9 268 aaPredicted RBP8.64□□□□□ -1.03
HPS4-207ENST00000459918 CACNA2D4Q7Z3S7 1137 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 USP37Q86T82 979 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 APPL2Q8NEU8 664 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 BSNDQ8WZ55 320 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 SPOCK2Q92563 424 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 ZFYVE19Q96K21 471 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 GCNAQ96QF7 691 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 ZSWIM6Q9HCJ5 1215 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 TUFT1Q9NNX1 390 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 GTSE1Q9NYZ3 720 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 CEP72Q9P209 647 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 ANKFY1Q9P2R3 1169 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 ORC3Q9UBD5 711 aaPredicted RBP8.64□□□□□ -1.03
HPS4-207ENST00000459918 YIPF1Q9Y548 306 aa8.64□□□□□ -1.03
HPS4-207ENST00000459918 ZNF638Q14966 1978 aaKnown RBP8.64□□□□□ -1.03
HPS4-207ENST00000459918 PHLPP2Q6ZVD8 1323 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 BAHCC1Q9P281 2608 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 K7ESF4 209 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 NRG2O14511 850 aaPredicted RBP8.63□□□□□ -1.03
HPS4-207ENST00000459918 MED24O75448 989 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 PMLP29590 882 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 CTHP32929 405 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 MCM7P33993 719 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 MPLP40238 635 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 GRM5P41594 1212 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 NOVA1P51513 510 aaKnown RBP8.63□□□□□ -1.03
HPS4-207ENST00000459918 LIMK1P53667 647 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 YWHAHQ04917 246 aaPredicted RBP8.63□□□□□ -1.03
HPS4-207ENST00000459918 SOX4Q06945 474 aaPredicted RBP8.63□□□□□ -1.03
HPS4-207ENST00000459918 GAS6Q14393 721 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 PTPAQ15257 358 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 ARHGAP29Q52LW3 1261 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 HAUS3Q68CZ6 603 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 RNF19BQ6ZMZ0 732 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 WDR5BQ86VZ2 330 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 RALGPS2Q86X27 583 aaPredicted RBP8.63□□□□□ -1.03
HPS4-207ENST00000459918 CATSPER3Q86XQ3 398 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 ZNF687Q8N1G0 1237 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 CEP120Q8N960 986 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 TTC16Q8NEE8 873 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 GAB3Q8WWW8 586 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 DDX12PQ92771 950 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 KIFAP3Q92845 792 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 TBC1D32Q96NH3 1257 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 ACAP3Q96P50 834 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 MRPL4Q9BYD3 311 aaKnown RBP8.63□□□□□ -1.03
HPS4-207ENST00000459918 CCDC113Q9H0I3 377 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 ATXN3LQ9H3M9 355 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 SMOC1Q9H4F8 434 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 POLD4Q9HCU8 107 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 THG1LQ9NWX6 298 aaKnown RBP8.63□□□□□ -1.03
HPS4-207ENST00000459918 AFF4Q9UHB7 1163 aaKnown RBP8.63□□□□□ -1.03
HPS4-207ENST00000459918 F5P12259 2224 aa8.63□□□□□ -1.03
HPS4-207ENST00000459918 LAMA1P25391 3075 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 ATG13O75143 517 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 EPN2O95208 641 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 KCNK5O95279 499 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 PAPSS2O95340 614 aaPredicted RBP8.62□□□□□ -1.03
HPS4-207ENST00000459918 EDN1P05305 212 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 PROS1P07225 676 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 OR4Q2P0C623 313 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 ZNF806P0C7X5 589 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 CYP11B2P19099 503 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 GBP1P32455 592 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 RPL9P32969 192 aaKnown RBP8.62□□□□□ -1.03
HPS4-207ENST00000459918 MLLT6P55198 1093 aaPredicted RBP8.62□□□□□ -1.03
HPS4-207ENST00000459918 PEX3P56589 373 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 CREB5Q02930 508 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 GRSF1Q12849 480 aaKnown RBP eCLIP8.62□□□□□ -1.03
HPS4-207ENST00000459918 STRN3Q13033 797 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 DMP1Q13316 513 aaPredicted RBP8.62□□□□□ -1.03
HPS4-207ENST00000459918 PDAP1Q13442 181 aaKnown RBP8.62□□□□□ -1.03
HPS4-207ENST00000459918 GNL2Q13823 731 aaKnown RBP8.62□□□□□ -1.03
HPS4-207ENST00000459918 VEPH1Q14D04 833 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 ELF2Q15723 593 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 STXBP5Q5T5C0 1151 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 GPR158Q5T848 1215 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 TXNDC11Q6PKC3 985 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 UNQ6494/PRO21346Q6UXR6 183 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 DSTYKQ6XUX3 929 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 KBTBD6Q86V97 674 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 ARID3BQ8IVW6 561 aaPredicted RBP8.62□□□□□ -1.03
HPS4-207ENST00000459918 DIS3L2Q8IYB7 885 aaKnown RBP8.62□□□□□ -1.03
HPS4-207ENST00000459918 SHKBP1Q8TBC3 707 aa8.62□□□□□ -1.03
HPS4-207ENST00000459918 C18orf25Q96B23 403 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms