RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 EHD3Q9NZN3 535 aa0.48□□□□□ -2.33
SNORD42B-201ENST00000458893 COL4A4P53420 1690 aaPredicted RBP0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 A0A0A6YYJ9 748 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 SLC12A8A0AV02 714 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 POC1B-GALNT4F8VUJ3 575 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 FOXN3O00409 490 aaPredicted RBP0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 EXTL3O43909 919 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 NRP2O60462 931 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 ITGA10O75578 1167 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 RNF8O76064 485 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 LY86O95711 162 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 GASTP01350 101 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 CHRM5P08912 532 aaPredicted RBP0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 GCSHP23434 173 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 PTPN7P35236 360 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 GRIA2P42262 883 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 FNTBP49356 437 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 FLT3LGP49771 235 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 ART1P52961 327 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 EEFSECP57772 596 aaKnown RBP0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 PPP2R2AP63151 447 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 LACTBP83111 547 aaPredicted RBP0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 GUCY1A3Q02108 690 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 EGR4Q05215 589 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 IFRD2Q12894 506 aaPredicted RBP0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 HSP90AA2PQ14568 343 aaPredicted RBP0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 KRT72Q14CN4 511 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 ZNF718Q3SXZ3 478 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 FAM47AQ5JRC9 791 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 PCID2Q5JVF3 399 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 CATSPEREQ5SY80 951 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 ANO7Q6IWH7 933 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 ANKRD16Q6P6B7 361 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 SERPINA13PQ6UXR4 307 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 TRIM72Q6ZMU5 477 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 ZNF813Q6ZN06 617 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 CLNKQ7Z7G1 428 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 NME9Q86XW9 330 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 GALNT4Q8N4A0 578 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 WDSUB1Q8N9V3 476 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 SNX19Q92543 992 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 SLC25A28Q96A46 364 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 MIB2Q96AX9 1013 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 FOXRED1Q96CU9 486 aaPredicted RBP0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 REPS1Q96D71 796 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 DAZAP1Q96EP5 407 aaKnown RBP0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 ZC3H10Q96K80 434 aaKnown RBP0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 SPATA32Q96LK8 384 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 SIGLEC11Q96RL6 698 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 MOV10L1Q9BXT6 1211 aaKnown RBP0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 UBXN6Q9BZV1 441 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 SPRY4Q9C004 299 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 GFRA4Q9GZZ7 299 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 SERTAD4Q9NUC0 356 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 TFCP2L1Q9NZI6 479 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 KCNG2Q9UJ96 466 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 NEU2Q9Y3R4 380 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 B3GALT1Q9Y5Z6 326 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 KIF26BQ2KJY2 2108 aa0.47□□□□□ -2.33
SNORD42B-201ENST00000458893 PRAMEF33A0A0G2JMD5 474 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 BTBD18B2RXH4 712 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 TMEM232C9JQI7 657 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 PRODHO43272 600 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 TLR2O60603 784 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 PRAMEF10O60809 474 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 PRAMEF4O60810 478 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 OPHN1O60890 802 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 ZC3H11AO75152 810 aaKnown RBP eCLIP0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 KRT36O76013 467 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 DDAH1O94760 285 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 IGLV2-11P01706 119 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 ACAA1P09110 424 aaPredicted RBP0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 ZNF883P0CG24 379 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 PPP3CBP16298 524 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 MYF6P23409 242 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 GATA3P23771 443 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 IL6STP40189 918 aaPredicted RBP0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 HLCSP50747 726 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 CRIP2P52943 208 aaPredicted RBP0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 DSCR9P59020 149 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 RPS13P62277 151 aaKnown RBP0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 SRSF1Q07955 248 aaKnown RBP eCLIP0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 ACSM2AQ08AH3 577 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 FCN2Q15485 313 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 ZNF672Q499Z4 452 aaPredicted RBP0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 FAM76BQ5HYJ3 339 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 WASHC2DQ5SRD0 308 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 PRAMEF19Q5SWL8 479 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 MEX3CQ5U5Q3 659 aaKnown RBP0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 NSMFQ6X4W1 530 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 NAPRTQ6XQN6 538 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 MORC1Q86VD1 984 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 P2RY8Q86VZ1 359 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 NOSTRINQ8IVI9 506 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 SFTPA1Q8IWL2 248 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 CISD2Q8N5K1 135 aaKnown RBP0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 CDYL2Q8N8U2 506 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 PCDH19Q8TAB3 1148 aa0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 OSR1Q8TAX0 266 aaPredicted RBP0.46□□□□□ -2.34
SNORD42B-201ENST00000458893 SLC35B2Q8TB61 432 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms