RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 ZSWIM4Q9H7M6 989 aa3.11□□□□□ -1.91
LINC02540-201ENST00000455554 DMRT3Q9NQL9 472 aa3.11□□□□□ -1.91
LINC02540-201ENST00000455554 ELOVL5Q9NYP7 299 aa3.11□□□□□ -1.91
LINC02540-201ENST00000455554 SERGEFQ9UGK8 458 aa3.11□□□□□ -1.91
LINC02540-201ENST00000455554 NEU2Q9Y3R4 380 aa3.11□□□□□ -1.91
LINC02540-201ENST00000455554 LRP12Q9Y561 859 aa3.11□□□□□ -1.91
LINC02540-201ENST00000455554 VWC2LB2RUY7 222 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 TARM1B6A8C7 271 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 PPP6CO00743 305 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 HAUS5O94927 633 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 TOP3BO95985 862 aaKnown RBP3.1□□□□□ -1.91
LINC02540-201ENST00000455554 HNRNPCP07910 306 aaKnown RBP eCLIP3.1□□□□□ -1.91
LINC02540-201ENST00000455554 PPP3CBP16298 524 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 DRD4P21917 467 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 NXPH1P58417 271 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 ITIH3Q06033 890 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 MTM1Q13496 603 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 DYRK1AQ13627 763 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 LAMB3Q13751 1172 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 MUM1Q2TAK8 710 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 ZNF260Q3ZCT1 412 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 SUPT20HL1Q3ZLR7 823 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 PREPLQ4J6C6 727 aaPredicted RBP3.1□□□□□ -1.91
LINC02540-201ENST00000455554 DACT2Q5SW24 774 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 SLC18B1Q6NT16 456 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 DHX37Q8IY37 1157 aaKnown RBP3.1□□□□□ -1.91
LINC02540-201ENST00000455554 SAMD14Q8IZD0 417 aaPredicted RBP3.1□□□□□ -1.91
LINC02540-201ENST00000455554 ADGRG5Q8IZF4 528 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 CAMKK1Q8N5S9 505 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 B3GALNT2Q8NCR0 500 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 NLGN4YQ8NFZ3 816 aaPredicted RBP3.1□□□□□ -1.91
LINC02540-201ENST00000455554 SNX19Q92543 992 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 CYFIP2Q96F07 1278 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 HMCESQ96FZ2 354 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 PBKQ96KB5 322 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 ADI1Q9BV57 179 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 TLR10Q9BXR5 811 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 ACE2Q9BYF1 805 aaPredicted RBP3.1□□□□□ -1.91
LINC02540-201ENST00000455554 IFT122Q9HBG6 1241 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 KLC4Q9NSK0 619 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 ZBTB21Q9ULJ3 1066 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 CDYLQ9Y232 598 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 PCDHB1Q9Y5F3 818 aa3.1□□□□□ -1.91
LINC02540-201ENST00000455554 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.09□□□□□ -1.91
LINC02540-201ENST00000455554 MTHFD2P13995 350 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 MCAMP43121 646 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 NR4A2P43354 598 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 MMP13P45452 471 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 SLC6A9P48067 706 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 CCT8P50990 548 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 ANXA11P50995 505 aaKnown RBP3.09□□□□□ -1.91
LINC02540-201ENST00000455554 CREMQ03060 361 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 ZNF844Q08AG5 666 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 SEPT2Q15019 361 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 SF3A1Q15459 793 aaKnown RBP3.09□□□□□ -1.91
LINC02540-201ENST00000455554 ATP2B3Q16720 1220 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 ANO4Q32M45 955 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 CCDC144BQ3MJ40 725 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 SLC2A7Q6PXP3 512 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 ZDHHC17Q8IUH5 632 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 NIM1KQ8IY84 436 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 CCHCR1Q8TD31 782 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 SH2D3AQ9BRG2 576 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 QTRT1Q9BXR0 403 aaKnown RBP3.09□□□□□ -1.91
LINC02540-201ENST00000455554 QRSL1Q9H0R6 528 aaKnown RBP3.09□□□□□ -1.91
LINC02540-201ENST00000455554 PIF1Q9H611 641 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 CTTNBP2NLQ9P2B4 639 aa3.09□□□□□ -1.91
LINC02540-201ENST00000455554 PRR23D1E9PI22 279 aaPredicted RBP3.08□□□□□ -1.92
LINC02540-201ENST00000455554 TOR1BO14657 336 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 SUN1O94901 812 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 TUBB4AP04350 444 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 AMY1AP04745 511 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 EBLN1P0CF75 366 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 PRR23D2P0DMB1 279 aaPredicted RBP3.08□□□□□ -1.92
LINC02540-201ENST00000455554 CYP2D6P10635 497 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 GSPT1P15170 499 aaKnown RBP3.08□□□□□ -1.92
LINC02540-201ENST00000455554 DDCP20711 480 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 PLCD1P51178 756 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 HNRNPMP52272 730 aaKnown RBP eCLIP3.08□□□□□ -1.92
LINC02540-201ENST00000455554 SESN3P58005 492 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 MGAT2Q10469 447 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 MALLQ13021 153 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 HLXQ14774 488 aaPredicted RBP3.08□□□□□ -1.92
LINC02540-201ENST00000455554 PROSER3Q2NL68 480 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 CEP78Q5JTW2 689 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 HOMER1Q86YM7 354 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 CLRN3Q8NCR9 226 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.08□□□□□ -1.92
LINC02540-201ENST00000455554 ADAMTS15Q8TE58 950 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 SPRTNQ9H040 489 aaPredicted RBP3.08□□□□□ -1.92
LINC02540-201ENST00000455554 TUBA8Q9NY65 449 aaPredicted RBP3.08□□□□□ -1.92
LINC02540-201ENST00000455554 WWOXQ9NZC7 414 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 NR2E3Q9Y5X4 410 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 ADGRA2Q96PE1 1338 aa3.08□□□□□ -1.92
LINC02540-201ENST00000455554 CCDC187A0A096LP49 1063 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 CCDC195A0A1B0GUA6 201 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 FAM171A2A8MVW0 826 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 ULK1O75385 1050 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 AGFG2O95081 481 aa3.07□□□□□ -1.92
LINC02540-201ENST00000455554 NR2F6P10588 404 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms