RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 ASB16Q96NS5 453 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 PLEKHA5Q9HAU0 1116 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 HEBP1Q9NRV9 189 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 GDE1Q9NZC3 331 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 LARSQ9P2J5 1176 aaKnown RBP17.47■□□□□ 0.39
GPC1-206ENST00000455111 SMC3Q9UQE7 1217 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 DENND4CQ5VZ89 1909 aa17.47■□□□□ 0.39
GPC1-206ENST00000455111 WDR87Q6ZQQ6 2873 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 H7C4K7 107 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 K7ENM7 598 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 OGTO15294 1046 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 CYP3A5P20815 502 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 GTF2BQ00403 316 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 PRKCQQ04759 706 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 SPATA1Q5VX52 437 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 JADE1Q6IE81 842 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 VITQ6UXI7 678 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 MAP4K3Q8IVH8 894 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 MYCT1Q8N699 235 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 ZSWIM2Q8NEG5 633 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 ELSPBP1Q96BH3 223 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 CDK5RAP3Q96JB5 506 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 PGLYRP2Q96PD5 576 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 MKNK1Q9BUB5 465 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 STRA6Q9BX79 667 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 UBQLN1Q9UMX0 589 aaKnown RBP17.46■□□□□ 0.39
GPC1-206ENST00000455111 KIF3AQ9Y496 699 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 YIPF1Q9Y548 306 aa17.46■□□□□ 0.39
GPC1-206ENST00000455111 FAM186AA6NE01 2351 aa17.45■□□□□ 0.38
GPC1-206ENST00000455111 SLC26A4O43511 780 aa17.45■□□□□ 0.38
GPC1-206ENST00000455111 TRAK2O60296 914 aa17.45■□□□□ 0.38
GPC1-206ENST00000455111 PPP1R37O75864 691 aa17.45■□□□□ 0.38
GPC1-206ENST00000455111 VIPR2P41587 438 aa17.45■□□□□ 0.38
GPC1-206ENST00000455111 LIG4P49917 911 aa17.45■□□□□ 0.38
GPC1-206ENST00000455111 CDR1P51861 262 aa17.45■□□□□ 0.38
GPC1-206ENST00000455111 WDR44Q5JSH3 913 aa17.45■□□□□ 0.38
GPC1-206ENST00000455111 STXBP5Q5T5C0 1151 aa17.45■□□□□ 0.38
GPC1-206ENST00000455111 CRELD2Q6UXH1 353 aaPredicted RBP17.45■□□□□ 0.38
GPC1-206ENST00000455111 TPRG1Q6ZUI0 275 aa17.45■□□□□ 0.38
GPC1-206ENST00000455111 OR10T2Q8NGX3 314 aa17.45■□□□□ 0.38
GPC1-206ENST00000455111 SHKBP1Q8TBC3 707 aa17.45■□□□□ 0.38
GPC1-206ENST00000455111 FGFBP2Q9BYJ0 223 aa17.45■□□□□ 0.38
GPC1-206ENST00000455111 CCSER1Q9C0I3 900 aa17.45■□□□□ 0.38
GPC1-206ENST00000455111 ZNF334Q9HCZ1 680 aaPredicted RBP17.45■□□□□ 0.38
GPC1-206ENST00000455111 FBXO2Q9UK22 296 aaPredicted RBP17.45■□□□□ 0.38
GPC1-206ENST00000455111 FAM170BA6NMN3 283 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 ARNTLO00327 626 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 PIRO00625 290 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 HNRNPDLO14979 420 aaKnown RBP17.44■□□□□ 0.38
GPC1-206ENST00000455111 SOAT2O75908 522 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 MICAL2O94851 1124 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 ADSSP30520 456 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 ELF1P32519 619 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 LONP1P36776 959 aaKnown RBP17.44■□□□□ 0.38
GPC1-206ENST00000455111 UBA7P41226 1012 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 ACOT2P49753 483 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 LILRA4P59901 499 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 PPP2R3AQ06190 1150 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 KCNA1Q09470 495 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 RESTQ13127 1097 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 UBXN2BQ14CS0 331 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 TEAD2Q15562 447 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 APPL2Q8NEU8 664 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 CLDN23Q96B33 292 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 BICD1Q96G01 975 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 BORCS6Q96GS4 357 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 FAM84AQ96KN4 292 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 CLIC6Q96NY7 704 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 LRRC3BQ96PB8 259 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 PARVGQ9HBI0 331 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 STYXL1Q9Y6J8 313 aa17.44■□□□□ 0.38
GPC1-206ENST00000455111 SPTBN4Q9H254 2564 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 A0A087X0B3 334 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 ANO9A1A5B4 782 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 MTMR11A4FU01 709 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 FAM13AO94988 1023 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 CPB1P15086 417 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 RFX1P22670 979 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 MATR3P43243 847 aaKnown RBP eCLIP17.43■□□□□ 0.38
GPC1-206ENST00000455111 YWHAHQ04917 246 aaPredicted RBP17.43■□□□□ 0.38
GPC1-206ENST00000455111 DUSP4Q13115 394 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 GPR17Q13304 367 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 C9orf57Q5W0N0 161 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 CENPPQ6IPU0 288 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 GPIHBP1Q8IV16 184 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 EFCAB13Q8IY85 973 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 SUMF1Q8NBK3 374 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 LARP4BQ92615 738 aaKnown RBP17.43■□□□□ 0.38
GPC1-206ENST00000455111 NELL1Q92832 810 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 DNAJC19Q96DA6 116 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 CALML4Q96GE6 196 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 MSTO1Q9BUK6 570 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 OSBPL6Q9BZF3 934 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 ST6GALNAC4Q9H4F1 302 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 KCNG1Q9UIX4 513 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 SLC27A5Q9Y2P5 690 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 GVINP1Q7Z2Y8 2422 aa17.43■□□□□ 0.38
GPC1-206ENST00000455111 RIF1Q5UIP0 2472 aaKnown RBP17.43■□□□□ 0.38
GPC1-206ENST00000455111 MYMKA6NI61 221 aa17.42■□□□□ 0.38
GPC1-206ENST00000455111 MYL4P12829 197 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms