RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 AGO3Q9H9G7 860 aaKnown RBP16.99■□□□□ 0.31
SNX17-204ENST00000453453 PLEKHA5Q9HAU0 1116 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 TANC1Q9C0D5 1861 aa16.98■□□□□ 0.31
SNX17-204ENST00000453453 LCA5LO95447 670 aa16.98■□□□□ 0.31
SNX17-204ENST00000453453 TMEM191BP0C7N4 346 aa16.98■□□□□ 0.31
SNX17-204ENST00000453453 SLC9A1P19634 815 aa16.98■□□□□ 0.31
SNX17-204ENST00000453453 RAB27AP51159 221 aa16.98■□□□□ 0.31
SNX17-204ENST00000453453 TLE2Q04725 743 aa16.98■□□□□ 0.31
SNX17-204ENST00000453453 DUOXA2Q1HG44 320 aa16.98■□□□□ 0.31
SNX17-204ENST00000453453 FAM43BQ6ZT52 329 aaPredicted RBP16.98■□□□□ 0.31
SNX17-204ENST00000453453 SV2AQ7L0J3 742 aa16.98■□□□□ 0.31
SNX17-204ENST00000453453 CCDC91Q7Z6B0 441 aa16.98■□□□□ 0.31
SNX17-204ENST00000453453 NT5DC4Q86YG4 428 aa16.98■□□□□ 0.31
SNX17-204ENST00000453453 TMEM192Q8IY95 271 aa16.98■□□□□ 0.31
SNX17-204ENST00000453453 PAWRQ96IZ0 340 aaKnown RBP16.98■□□□□ 0.31
SNX17-204ENST00000453453 SNTG2Q9NY99 539 aa16.98■□□□□ 0.31
SNX17-204ENST00000453453 CEP72Q9P209 647 aa16.98■□□□□ 0.31
SNX17-204ENST00000453453 ATP11BQ9Y2G3 1177 aa16.98■□□□□ 0.31
SNX17-204ENST00000453453 FAM169AQ9Y6X4 670 aa16.98■□□□□ 0.31
SNX17-204ENST00000453453 LACTBL1A8MY62 500 aa16.97■□□□□ 0.31
SNX17-204ENST00000453453 PARNO95453 639 aaKnown RBP16.97■□□□□ 0.31
SNX17-204ENST00000453453 TFAMQ00059 246 aaKnown RBP16.97■□□□□ 0.31
SNX17-204ENST00000453453 EPC2Q52LR7 807 aa16.97■□□□□ 0.31
SNX17-204ENST00000453453 UBXN11Q5T124 520 aa16.97■□□□□ 0.31
SNX17-204ENST00000453453 LMBRD2Q68DH5 695 aaPredicted RBP16.97■□□□□ 0.31
SNX17-204ENST00000453453 MICALCLQ6ZW33 695 aa16.97■□□□□ 0.31
SNX17-204ENST00000453453 NXF3Q9H4D5 531 aaKnown RBP16.97■□□□□ 0.31
SNX17-204ENST00000453453 NHEJ1Q9H9Q4 299 aaPredicted RBP16.97■□□□□ 0.31
SNX17-204ENST00000453453 TRIM10Q9UDY6 481 aa16.97■□□□□ 0.31
SNX17-204ENST00000453453 COQ4Q9Y3A0 265 aa16.97■□□□□ 0.31
SNX17-204ENST00000453453 HYOU1Q9Y4L1 999 aa16.97■□□□□ 0.31
SNX17-204ENST00000453453 IPPQ9Y573 584 aa16.97■□□□□ 0.31
SNX17-204ENST00000453453 HSF2BPO75031 334 aa16.96■□□□□ 0.31
SNX17-204ENST00000453453 SKIP12755 728 aa16.96■□□□□ 0.31
SNX17-204ENST00000453453 RFX1P22670 979 aa16.96■□□□□ 0.31
SNX17-204ENST00000453453 PIK3CAP42336 1068 aa16.96■□□□□ 0.31
SNX17-204ENST00000453453 WNT7BP56706 349 aa16.96■□□□□ 0.31
SNX17-204ENST00000453453 POLR2FP61218 127 aaKnown RBP16.96■□□□□ 0.31
SNX17-204ENST00000453453 SPA17Q15506 151 aa16.96■□□□□ 0.31
SNX17-204ENST00000453453 SLC10A6Q3KNW5 377 aa16.96■□□□□ 0.31
SNX17-204ENST00000453453 ZACNQ401N2 412 aa16.96■□□□□ 0.31
SNX17-204ENST00000453453 TRAF7Q6Q0C0 670 aa16.96■□□□□ 0.31
SNX17-204ENST00000453453 YTHDF3Q7Z739 585 aaKnown RBP16.96■□□□□ 0.31
SNX17-204ENST00000453453 CNPY4Q8N129 248 aa16.96■□□□□ 0.31
SNX17-204ENST00000453453 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.96■□□□□ 0.31
SNX17-204ENST00000453453 TSPAN18Q96SJ8 248 aa16.96■□□□□ 0.31
SNX17-204ENST00000453453 APOL6Q9BWW8 343 aa16.96■□□□□ 0.31
SNX17-204ENST00000453453 IFIH1Q9BYX4 1025 aaKnown RBP16.96■□□□□ 0.31
SNX17-204ENST00000453453 NUCKS1Q9H1E3 243 aaKnown RBP16.96■□□□□ 0.31
SNX17-204ENST00000453453 HIPK3Q9H422 1215 aa16.96■□□□□ 0.31
SNX17-204ENST00000453453 FAM105AQ9NUU6 356 aa16.96■□□□□ 0.31
SNX17-204ENST00000453453 RAB20Q9NX57 234 aa16.96■□□□□ 0.31
SNX17-204ENST00000453453 PARP2Q9UGN5 583 aa16.96■□□□□ 0.31
SNX17-204ENST00000453453 DERAQ9Y315 318 aa16.96■□□□□ 0.31
SNX17-204ENST00000453453 PCDHB2Q9Y5E7 798 aa16.96■□□□□ 0.31
SNX17-204ENST00000453453 ENC1O14682 589 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 PJA2O43164 708 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 RECQL4O94761 1208 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 C4BPAP04003 597 aaKnown RBP16.96■□□□□ 0.3
SNX17-204ENST00000453453 TMEM132DQ14C87 1099 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 WDR44Q5JSH3 913 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 KLHDC7AQ5VTJ3 777 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 C15orf39Q6ZRI6 1047 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 MICALL1Q8N3F8 863 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 MREGQ8N565 214 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 ZNF516Q92618 1163 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 SNX27Q96L92 541 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 ALS2CR12Q96Q35 445 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 RUFY1Q96T51 708 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 FTHL17Q9BXU8 183 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 IMPG2Q9BZV3 1241 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 MTMR12Q9C0I1 747 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 APEX2Q9UBZ4 518 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 FBXL5Q9UKA1 691 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 C2CD2Q9Y426 696 aa16.96■□□□□ 0.3
SNX17-204ENST00000453453 KIAA0100Q14667 2235 aaKnown RBP16.95■□□□□ 0.3
SNX17-204ENST00000453453 PDCD11Q14690 1871 aaKnown RBP16.95■□□□□ 0.3
SNX17-204ENST00000453453 PTPRJQ12913 1337 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 ZC3H11AO75152 810 aaKnown RBP eCLIP16.95■□□□□ 0.3
SNX17-204ENST00000453453 HLA-DRAP01903 254 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 ACTN1P12814 892 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 ITGA4P13612 1032 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 UCHL3P15374 230 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 CCT5P48643 541 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 FAAP100Q0VG06 881 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 TRPC3Q13507 836 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 DSC3Q14574 896 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 TDRD10Q5VZ19 366 aaKnown RBP16.95■□□□□ 0.3
SNX17-204ENST00000453453 JADE1Q6IE81 842 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 CREG2Q8IUH2 290 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 OR5B17Q8NGF7 314 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 TAS1R2Q8TE23 839 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 FAM81BQ96LP2 452 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 NT5C1BQ96P26 610 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 SPAG5Q96R06 1193 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 ADAM2Q99965 735 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 TRAIPQ9BWF2 469 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 GANQ9H2C0 597 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 NLRC4Q9NPP4 1024 aa16.95■□□□□ 0.3
SNX17-204ENST00000453453 HES2Q9Y543 173 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms