RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 NOP14P78316 857 aaKnown RBP19.34■□□□□ 0.69
TRAPPC4-203ENST00000447216 SGSM1Q2NKQ1 1148 aa19.34■□□□□ 0.69
TRAPPC4-203ENST00000447216 CLP1Q92989 425 aaKnown RBP19.34■□□□□ 0.69
TRAPPC4-203ENST00000447216 TATDN2Q93075 761 aa19.34■□□□□ 0.69
TRAPPC4-203ENST00000447216 GRPEL1Q9HAV7 217 aa19.34■□□□□ 0.69
TRAPPC4-203ENST00000447216 MSRAQ9UJ68 235 aa19.34■□□□□ 0.69
TRAPPC4-203ENST00000447216 SIK3Q9Y2K2 1263 aa19.34■□□□□ 0.69
TRAPPC4-203ENST00000447216 NUB1Q9Y5A7 615 aa19.34■□□□□ 0.69
TRAPPC4-203ENST00000447216 CBFA2T2O43439 604 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 TADA2AO75478 443 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 ATICP31939 592 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 CTNNB1P35222 781 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 MYO1EQ12965 1108 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 SV2CQ496J9 727 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 TIGD5Q53EQ6 642 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 WDR44Q5JSH3 913 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 GJB7Q6PEY0 223 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 TRIM65Q6PJ69 517 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 SCARA5Q6ZMJ2 495 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 ARHGEF19Q8IW93 802 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 SLC39A11Q8N1S5 342 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 PCMTD1Q96MG8 357 aaPredicted RBP19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 ERGIC2Q96RQ1 377 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 C17orf80Q9BSJ5 609 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 IMPG2Q9BZV3 1241 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 SIX2Q9NPC8 291 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 AAASQ9NRG9 546 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 NXF1Q9UBU9 619 aaKnown RBP19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 ADAM28Q9UKQ2 775 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 MTUS1Q9ULD2 1270 aa19.33■□□□□ 0.68
TRAPPC4-203ENST00000447216 KPNA7A9QM74 516 aa19.32■□□□□ 0.68
TRAPPC4-203ENST00000447216 TMEM189-UBE2V1I3L0A0 370 aa19.32■□□□□ 0.68
TRAPPC4-203ENST00000447216 PNPLA4P41247 253 aa19.32■□□□□ 0.68
TRAPPC4-203ENST00000447216 TAP1Q03518 808 aa19.32■□□□□ 0.68
TRAPPC4-203ENST00000447216 GSE1Q14687 1217 aa19.32■□□□□ 0.68
TRAPPC4-203ENST00000447216 RAB30Q15771 203 aa19.32■□□□□ 0.68
TRAPPC4-203ENST00000447216 WDR72Q3MJ13 1102 aa19.32■□□□□ 0.68
TRAPPC4-203ENST00000447216 ZNF667Q5HYK9 610 aa19.32■□□□□ 0.68
TRAPPC4-203ENST00000447216 DPY19L2P1Q6NXN4 242 aa19.32■□□□□ 0.68
TRAPPC4-203ENST00000447216 DSTYKQ6XUX3 929 aa19.32■□□□□ 0.68
TRAPPC4-203ENST00000447216 CCDC150Q8NCX0 1101 aa19.32■□□□□ 0.68
TRAPPC4-203ENST00000447216 IGSF21Q96ID5 467 aa19.32■□□□□ 0.68
TRAPPC4-203ENST00000447216 NT5C1BQ96P26 610 aa19.32■□□□□ 0.68
TRAPPC4-203ENST00000447216 SPG21Q9NZD8 308 aa19.32■□□□□ 0.68
TRAPPC4-203ENST00000447216 PCDHB12Q9Y5F1 795 aa19.32■□□□□ 0.68
TRAPPC4-203ENST00000447216 SNX9Q9Y5X1 595 aa19.32■□□□□ 0.68
TRAPPC4-203ENST00000447216 STAU1O95793 577 aaKnown RBP19.31■□□□□ 0.68
TRAPPC4-203ENST00000447216 ZNF75DP51815 510 aa19.31■□□□□ 0.68
TRAPPC4-203ENST00000447216 PRPF38BQ5VTL8 546 aaKnown RBP19.31■□□□□ 0.68
TRAPPC4-203ENST00000447216 FUT10Q6P4F1 479 aa19.31■□□□□ 0.68
TRAPPC4-203ENST00000447216 TAF4BQ92750 862 aa19.31■□□□□ 0.68
TRAPPC4-203ENST00000447216 KAT5Q92993 513 aa19.31■□□□□ 0.68
TRAPPC4-203ENST00000447216 SENP8Q96LD8 212 aa19.31■□□□□ 0.68
TRAPPC4-203ENST00000447216 VN1R3Q9BXE9 311 aa19.31■□□□□ 0.68
TRAPPC4-203ENST00000447216 GPR62Q9BZJ7 368 aa19.31■□□□□ 0.68
TRAPPC4-203ENST00000447216 SMYD3Q9H7B4 428 aa19.31■□□□□ 0.68
TRAPPC4-203ENST00000447216 VRTNQ9H8Y1 702 aa19.31■□□□□ 0.68
TRAPPC4-203ENST00000447216 FAM207AQ9NSI2 230 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC4-203ENST00000447216 AJAP1Q9UKB5 411 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC4-203ENST00000447216 ATG2AQ2TAZ0 1938 aa19.31■□□□□ 0.68
TRAPPC4-203ENST00000447216 MYO7AQ13402 2215 aa19.31■□□□□ 0.68
TRAPPC4-203ENST00000447216 CHD9Q3L8U1 2897 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 CYB561D2O14569 222 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 EPHB6O15197 1021 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 TPM3P06753 285 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 DNAJB2P25686 324 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 BMPR1AP36894 532 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 PBX1P40424 430 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 RAP1GAPP47736 663 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 AARSP49588 968 aaKnown RBP eCLIP19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 TNNC1P63316 161 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 PHLDB3Q6NSJ2 640 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 RRAGAQ7L523 313 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 TAS1R1Q7RTX1 841 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 KLHL23Q8NBE8 558 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 B3GALT6Q96L58 329 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 TGS1Q96RS0 853 aaKnown RBP19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 MMS19Q96T76 1030 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 ARID3AQ99856 593 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 NIF3L1Q9GZT8 377 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 SDCBP2Q9H190 292 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 CERS4Q9HA82 394 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 GDAP2Q9NXN4 497 aa19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 TIMM13Q9Y5L4 95 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC4-203ENST00000447216 A0A1W2PQC6 194 aa19.29■□□□□ 0.68
TRAPPC4-203ENST00000447216 FGF18O76093 207 aa19.29■□□□□ 0.68
TRAPPC4-203ENST00000447216 ASPAP45381 313 aa19.29■□□□□ 0.68
TRAPPC4-203ENST00000447216 CDH8P55286 799 aa19.29■□□□□ 0.68
TRAPPC4-203ENST00000447216 SMAD3P84022 425 aaKnown RBP19.29■□□□□ 0.68
TRAPPC4-203ENST00000447216 KLHDC7AQ5VTJ3 777 aa19.29■□□□□ 0.68
TRAPPC4-203ENST00000447216 PPP2R2DQ66LE6 453 aa19.29■□□□□ 0.68
TRAPPC4-203ENST00000447216 PPM1KQ8N3J5 372 aa19.29■□□□□ 0.68
TRAPPC4-203ENST00000447216 NEK11Q8NG66 645 aa19.29■□□□□ 0.68
TRAPPC4-203ENST00000447216 TMEM169Q96HH4 297 aa19.29■□□□□ 0.68
TRAPPC4-203ENST00000447216 SUSD3Q96L08 255 aa19.29■□□□□ 0.68
TRAPPC4-203ENST00000447216 GANQ9H2C0 597 aa19.29■□□□□ 0.68
TRAPPC4-203ENST00000447216 UBE2TQ9NPD8 197 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC4-203ENST00000447216 L1RE1Q9UN81 338 aa19.29■□□□□ 0.68
TRAPPC4-203ENST00000447216 SF3B1O75533 1304 aaKnown RBP eCLIP19.28■□□□□ 0.683e-6■■■■■ 137.9
TRAPPC4-203ENST00000447216 CHD7Q9P2D1 2997 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms