RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 CISHQ9NSE2 258 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 SETD4Q9NVD3 440 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 PCDHGC3Q9UN70 934 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 ALG6Q9Y672 507 aa14.05□□□□□ -0.16
CPSF4-206ENST00000441580 PDCD11Q14690 1871 aaKnown RBP14.04□□□□□ -0.16
CPSF4-206ENST00000441580 TMEM110-MUSTN1A8MSY1 372 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 LACTBL1A8MY62 500 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 KRIT1O00522 736 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 CA12O43570 354 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 HEXIM1O94992 359 aaKnown RBP14.04□□□□□ -0.16
CPSF4-206ENST00000441580 RPLP2P05387 115 aaKnown RBP14.04□□□□□ -0.16
CPSF4-206ENST00000441580 MYL3P08590 195 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 KRT19P08727 400 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 DARSP14868 501 aaKnown RBP14.04□□□□□ -0.16
CPSF4-206ENST00000441580 COMTP21964 271 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 CYP2C19P33261 490 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 MAN1A1P33908 653 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 MESDQ14696 234 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 FSCN1Q16658 493 aaKnown RBP14.04□□□□□ -0.16
CPSF4-206ENST00000441580 MFSD14CQ5VZR4 134 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 JADE1Q6IE81 842 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 CATSPER4Q7RTX7 472 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 C1orf127Q8N9H9 656 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 TMEM35BQ8NCS4 154 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 AENQ8WTP8 325 aaKnown RBP14.04□□□□□ -0.16
CPSF4-206ENST00000441580 CD101Q93033 1021 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 ELMO3Q96BJ8 720 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 RUNDC3BQ96NL0 473 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 TSPAN18Q96SJ8 248 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 KRT12Q99456 494 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 FAM49AQ9H0Q0 323 aaPredicted RBP14.04□□□□□ -0.16
CPSF4-206ENST00000441580 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.04□□□□□ -0.16
CPSF4-206ENST00000441580 SIX4Q9UIU6 781 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 ANAPC7Q9UJX3 599 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 GJD2Q9UKL4 321 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 L1RE1Q9UN81 338 aa14.04□□□□□ -0.16
CPSF4-206ENST00000441580 C17orf102A2RUQ5 167 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 DUSP11O75319 330 aaKnown RBP14.03□□□□□ -0.16
CPSF4-206ENST00000441580 SASH3O75995 380 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 CD58P19256 250 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 HOXC8P31273 242 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 CDH5P33151 784 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-206ENST00000441580 TNNT3P45378 269 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-206ENST00000441580 YARSP54577 528 aaKnown RBP14.03□□□□□ -0.16
CPSF4-206ENST00000441580 TAP1Q03518 808 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 CASP8Q14790 479 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 CCL14Q16627 93 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 PTPROQ16827 1216 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 KIZQ2M2Z5 673 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 DCAF12L1Q5VU92 463 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 TAF2Q6P1X5 1199 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 SCARA5Q6ZMJ2 495 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 CCNI2Q6ZMN8 369 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-206ENST00000441580 CDR2LQ86X02 465 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-206ENST00000441580 SMC1BQ8NDV3 1235 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 CCDC26Q8TAB7 109 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-206ENST00000441580 SNX27Q96L92 541 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 C11orf70Q9BRQ4 267 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 GDF3Q9NR23 364 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 ADAM22Q9P0K1 906 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 STRIP2Q9ULQ0 834 aa14.03□□□□□ -0.16
CPSF4-206ENST00000441580 ABT1Q9ULW3 272 aaKnown RBP14.03□□□□□ -0.16
CPSF4-206ENST00000441580 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.03□□□□□ -0.16
CPSF4-206ENST00000441580 PSTPIP1O43586 416 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 GPR32O75388 356 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 NPTXRO95502 500 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 CST3P01034 146 aaPredicted RBP14.02□□□□□ -0.17
CPSF4-206ENST00000441580 FGGP02679 453 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 ITGB3P05106 788 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 CYBAP13498 195 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 EIF4BP23588 611 aaKnown RBP14.02□□□□□ -0.17
CPSF4-206ENST00000441580 RRM1P23921 792 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 TM4SF4P48230 202 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 RWDD2BP57060 319 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 ADAM17P78536 824 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 RBP5P82980 135 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 LACTBP83111 547 aaPredicted RBP14.02□□□□□ -0.17
CPSF4-206ENST00000441580 CUL1Q13616 776 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 SLC10A6Q3KNW5 377 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 PRAMEF19Q5SWL8 479 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 PLEKHA7Q6IQ23 1121 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 MAATS1Q7Z4T9 603 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 PASD1Q8IV76 773 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 TMEM192Q8IY95 271 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 NME8Q8N427 588 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 ZNF606Q8WXB4 792 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 CPA5Q8WXQ8 436 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 CAVIN3Q969G5 261 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 LENG1Q96BZ8 264 aaPredicted RBP14.02□□□□□ -0.17
CPSF4-206ENST00000441580 CYFIP2Q96F07 1278 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 UPF3AQ9H1J1 476 aaKnown RBP14.02□□□□□ -0.17
CPSF4-206ENST00000441580 PCDHA3Q9Y5H8 950 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 DOCK3Q8IZD9 2030 aa14.02□□□□□ -0.17
CPSF4-206ENST00000441580 SPDYE4A6NLX3 237 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 MYO1FO00160 1098 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 RAD51CO43502 376 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 XPOTO43592 962 aaKnown RBP14.01□□□□□ -0.17
CPSF4-206ENST00000441580 PROSCO94903 275 aa14.01□□□□□ -0.17
CPSF4-206ENST00000441580 MMP8P22894 467 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms