RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 P2RY13Q9BPV8 354 aa10.18□□□□□ -0.78
RPE-209ENST00000438191 LRRC4CQ9HCJ2 640 aa10.18□□□□□ -0.78
RPE-209ENST00000438191 ASAH2Q9NR71 780 aa10.18□□□□□ -0.78
RPE-209ENST00000438191 GKN1Q9NS71 199 aa10.18□□□□□ -0.78
RPE-209ENST00000438191 HES2Q9Y543 173 aa10.18□□□□□ -0.78
RPE-209ENST00000438191 BACE2Q9Y5Z0 518 aa10.18□□□□□ -0.78
RPE-209ENST00000438191 ARID2Q68CP9 1835 aa10.18□□□□□ -0.78
RPE-209ENST00000438191 SPTBN1Q01082 2364 aaKnown RBP10.18□□□□□ -0.78
RPE-209ENST00000438191 DHX15O43143 795 aaKnown RBP10.17□□□□□ -0.78
RPE-209ENST00000438191 BRINP1O60477 761 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 ZNF883P0CG24 379 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 HNRNPLP14866 589 aaKnown RBP eCLIP10.17□□□□□ -0.78
RPE-209ENST00000438191 JUPP14923 745 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 MCM2P49736 904 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 TLE1Q04724 770 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 VAC14Q08AM6 782 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 ELAVL2Q12926 359 aaKnown RBP10.17□□□□□ -0.78
RPE-209ENST00000438191 GRIK3Q13003 919 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 CRY1Q16526 586 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 TBC1D25Q3MII6 688 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 CCDC157Q569K6 752 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 KIAA1614Q5VZ46 1190 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 TSHZ3Q63HK5 1081 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 ITPRIPQ8IWB1 547 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 FAM83CQ9BQN1 747 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 EIF2AQ9BY44 585 aaKnown RBP10.17□□□□□ -0.78
RPE-209ENST00000438191 ZDHHC5Q9C0B5 715 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 RNF41Q9H4P4 317 aaPredicted RBP10.17□□□□□ -0.78
RPE-209ENST00000438191 IL21RQ9HBE5 538 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 IFT122Q9HBG6 1241 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 CYP4F11Q9HBI6 524 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 STARD5Q9NSY2 213 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 GABBR1Q9UBS5 961 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 PLEKHB1Q9UF11 243 aaPredicted RBP10.17□□□□□ -0.78
RPE-209ENST00000438191 TPCN1Q9ULQ1 816 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 GIT1Q9Y2X7 761 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 CABIN1Q9Y6J0 2220 aa10.17□□□□□ -0.78
RPE-209ENST00000438191 A0A1W2PRU2 124 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 FLRT2O43155 660 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 TNFSF14O43557 240 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 ALDH1A2O94788 518 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 ATF2P15336 505 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 TNFRSF8P28908 595 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 CLDN6P56747 220 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 AMPD2Q01433 879 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 RPL6Q02878 288 aaKnown RBP10.16□□□□□ -0.78
RPE-209ENST00000438191 UBE2SQ16763 222 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 TMEM92Q6UXU6 159 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 SLC41A1Q8IVJ1 513 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 KSR1Q8IVT5 923 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 FAM9BQ8IZU0 186 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 FAM26EQ8N5C1 309 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 ZNF248Q8NDW4 579 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 USP33Q8TEY7 942 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 PIBF1Q8WXW3 757 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 NAF1Q96HR8 494 aaKnown RBP10.16□□□□□ -0.78
RPE-209ENST00000438191 POLR3CQ9BUI4 534 aaPredicted RBP10.16□□□□□ -0.78
RPE-209ENST00000438191 LRRC3Q9BY71 257 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 TM7SF3Q9NS93 570 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 THG1LQ9NWX6 298 aaKnown RBP10.16□□□□□ -0.78
RPE-209ENST00000438191 MMP17Q9ULZ9 603 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 TBX20Q9UMR3 447 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 PCDHA6Q9UN73 950 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 BTBD3Q9Y2F9 522 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 PCDHA8Q9Y5H6 950 aa10.16□□□□□ -0.78
RPE-209ENST00000438191 NF1P21359 2839 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 BOD1L1Q8NFC6 3051 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 MEIS1O00470 390 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 PRAMEF12O95522 483 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 OATP04181 439 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 HNF1BP35680 557 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 SCRN1Q12765 414 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 TARDBPQ13148 414 aaKnown RBP eCLIP10.15□□□□□ -0.78
RPE-209ENST00000438191 BYSLQ13895 437 aaKnown RBP10.15□□□□□ -0.78
RPE-209ENST00000438191 TARBP2Q15633 366 aaKnown RBP10.15□□□□□ -0.78
RPE-209ENST00000438191 CEP55Q53EZ4 464 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 ZKSCAN2Q63HK3 967 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 TRIM68Q6AZZ1 485 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 SLC8B1Q6J4K2 584 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 RHPN2Q8IUC4 686 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 SIRT2Q8IXJ6 389 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 DDX27Q96GQ7 796 aaKnown RBP10.15□□□□□ -0.78
RPE-209ENST00000438191 GPATCH3Q96I76 525 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 NLRP4Q96MN2 994 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 TBC1D32Q96NH3 1257 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 EBF3Q9H4W6 596 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 MINDY3Q9H8M7 445 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 NRBP2Q9NSY0 501 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 PCDHGB2Q9Y5G2 931 aa10.15□□□□□ -0.78
RPE-209ENST00000438191 IGKV6-21A0A0C4DH24 114 aa10.14□□□□□ -0.79
RPE-209ENST00000438191 ESYT2A0FGR8 921 aa10.14□□□□□ -0.79
RPE-209ENST00000438191 ANTXRLA6NF34 631 aa10.14□□□□□ -0.79
RPE-209ENST00000438191 CASTOR2A6NHX0 329 aa10.14□□□□□ -0.79
RPE-209ENST00000438191 SPDYE3A6NKU9 549 aa10.14□□□□□ -0.79
RPE-209ENST00000438191 SMARCA5O60264 1052 aaPredicted RBP10.14□□□□□ -0.79
RPE-209ENST00000438191 GJA4P35212 333 aa10.14□□□□□ -0.79
RPE-209ENST00000438191 NT5C2P49902 561 aa10.14□□□□□ -0.79
RPE-209ENST00000438191 TWF1Q12792 350 aa10.14□□□□□ -0.79
RPE-209ENST00000438191 TUSC3Q13454 348 aa10.14□□□□□ -0.79
RPE-209ENST00000438191 SLC36A4Q6YBV0 504 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms