RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 RNF40O75150 1001 aa13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 TRIM16O95361 564 aa13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 PRKCBP05771 671 aa13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 ATF2P15336 505 aa13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 BCKDHBP21953 392 aa13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 MCM5P33992 734 aa13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 BRCC3P46736 316 aa13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 PSMC5P62195 406 aa13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 SEMA3BQ13214 749 aa13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 TMEM259Q4ZIN3 620 aa13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 SLC8B1Q6J4K2 584 aa13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 CYP2U1Q7Z449 544 aa13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 ARID3BQ8IVW6 561 aaPredicted RBP13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 TCEAL8Q8IYN2 117 aa13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 REXO1Q8N1G1 1221 aaKnown RBP13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 ZNF713Q8N859 430 aaPredicted RBP13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 PIGKQ92643 395 aa13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 CHFRQ96EP1 664 aa13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 FBRSL1Q9HCM7 1045 aaKnown RBP13.61□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 A0A1W2PRU2 124 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 EML1O00423 815 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 ATG13O75143 517 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 B3GAT3O94766 335 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 EGFP01133 1207 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 THP07101 528 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 EPHA5P54756 1037 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 NCBP1Q09161 790 aaKnown RBP13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 TWF1Q12792 350 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 EMC2Q15006 297 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 TMEM196Q5HYL7 178 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 IQCEQ6IPM2 695 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 SLC27A1Q6PCB7 646 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 ANKS3Q6ZW76 656 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 TATDN2Q93075 761 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 E2F7Q96AV8 911 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 ZNF512Q96ME7 567 aaPredicted RBP13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 ZMYND12Q9H0C1 365 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 TMEM134Q9H6X4 195 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 SCUBE2Q9NQ36 999 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 FSCN3Q9NQT6 498 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 ASAH2Q9NR71 780 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 MBD1Q9UIS9 605 aaPredicted RBP13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 PLXNB3Q9ULL4 1909 aa13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 URB1O60287 2271 aaKnown RBP13.6□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 A0A1B0GUA9 196 aa13.59□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 ZBTB39O15060 712 aa13.59□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 ASAP2O43150 1006 aa13.59□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 ENGP17813 658 aa13.59□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 CLCNKBP51801 687 aa13.59□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 HDAC1Q13547 482 aaPredicted RBP13.59□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 KARSQ15046 597 aaKnown RBP13.59□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 ARHGAP29Q52LW3 1261 aa13.59□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 TRIM61Q5EBN2 209 aa13.59□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 NAIF1Q69YI7 327 aaPredicted RBP13.59□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 CCNI2Q6ZMN8 369 aaPredicted RBP13.59□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 PNPLA1Q8N8W4 532 aa13.59□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 C3orf58Q8NDZ4 430 aa13.59□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 ASAP3Q8TDY4 903 aa13.59□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 LRRC3Q9BY71 257 aa13.59□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 TPSD1Q9BZJ3 242 aa13.59□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 RAI2Q9Y5P3 530 aa13.59□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 THADAQ6YHU6 1953 aa13.59□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 ZMYM2Q9UBW7 1377 aa13.58□□□□□ -0.23
SMAD9-IT1-201ENST00000437983 OTOL1A6NHN0 477 aaPredicted RBP13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 TBX3O15119 743 aa13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 CDC27P30260 824 aa13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 RDXP35241 583 aaKnown RBP13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 DHPSP49366 369 aaPredicted RBP13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 DGKEP52429 567 aa13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 GRSF1Q12849 480 aaKnown RBP eCLIP13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 CAPSQ13938 189 aa13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 PCBP1Q15365 356 aaKnown RBP eCLIP13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 RTN1Q16799 776 aa13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 PFKFB3Q16875 520 aaPredicted RBP13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 APOA5Q6Q788 366 aa13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 SGMS1Q86VZ5 419 aa13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 CHD1LQ86WJ1 897 aa13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 ELMOD1Q8N336 334 aa13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 TCP11Q8WWU5 503 aa13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 GOLGA2P5Q9HBQ8 144 aa13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 C6orf50Q9HD87 102 aa13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 XPNPEP1Q9NQW7 623 aa13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 TMEM74BQ9NUR3 256 aa13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 RBM28Q9NW13 759 aaKnown RBP13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 EBF1Q9UH73 591 aa13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 BRPF3Q9ULD4 1205 aa13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 RBM8AQ9Y5S9 174 aaKnown RBP13.58□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 ESYT2A0FGR8 921 aa13.57□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 TMEM189-UBE2V1I3L0A0 370 aa13.57□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 RECQL4O94761 1208 aa13.57□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 TDP2O95551 362 aa13.57□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 APBB3O95704 486 aa13.57□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 U2AF2P26368 475 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 QARSP47897 775 aaKnown RBP13.57□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 LMAN2Q12907 356 aa13.57□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 ZNF423Q2M1K9 1284 aa13.57□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 ITPRIPL2Q3MIP1 535 aa13.57□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 GLRA4Q5JXX5 417 aa13.57□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 HAUS6Q7Z4H7 955 aa13.57□□□□□ -0.24
SMAD9-IT1-201ENST00000437983 ZNF605Q86T29 641 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms