RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 MSANTD3Q96H12 275 aa12.66□□□□□ -0.38
LINC00271-202ENST00000436554 SUSD3Q96L08 255 aa12.66□□□□□ -0.38
LINC00271-202ENST00000436554 TBC1D32Q96NH3 1257 aa12.66□□□□□ -0.38
LINC00271-202ENST00000436554 ACAP3Q96P50 834 aa12.66□□□□□ -0.38
LINC00271-202ENST00000436554 LRRC3BQ96PB8 259 aa12.66□□□□□ -0.38
LINC00271-202ENST00000436554 ACO2Q99798 780 aaKnown RBP12.66□□□□□ -0.38
LINC00271-202ENST00000436554 LRRC3Q9BY71 257 aa12.66□□□□□ -0.38
LINC00271-202ENST00000436554 CDT1Q9H211 546 aa12.66□□□□□ -0.38
LINC00271-202ENST00000436554 PTPRHQ9HD43 1115 aa12.66□□□□□ -0.38
LINC00271-202ENST00000436554 MAFFQ9ULX9 164 aa12.66□□□□□ -0.38
LINC00271-202ENST00000436554 CNOT1A5YKK6 2376 aaKnown RBP12.66□□□□□ -0.38
LINC00271-202ENST00000436554 USP24Q9UPU5 2620 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 MYBPHLA2RUH7 354 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 SPECC1L-ADORA2AF8WAN1 911 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 EPB41L2O43491 1005 aaKnown RBP12.65□□□□□ -0.38
LINC00271-202ENST00000436554 ZNF806P0C7X5 589 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 MARCKSP29966 332 aaPredicted RBP12.65□□□□□ -0.38
LINC00271-202ENST00000436554 HOXA6P31267 233 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 CTHP32929 405 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 MCM4P33991 863 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 FOSBP53539 338 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 LIMK1P53667 647 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 SHC2P98077 582 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 FCHO2Q0JRZ9 810 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 PON2Q15165 354 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 ECM1Q16610 540 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 ZNF280DQ6N043 979 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 WDR5BQ86VZ2 330 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 RALGPS2Q86X27 583 aaPredicted RBP12.65□□□□□ -0.38
LINC00271-202ENST00000436554 DIS3L2Q8IYB7 885 aaKnown RBP12.65□□□□□ -0.38
LINC00271-202ENST00000436554 NECAB1Q8N987 351 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 C12orf50Q8NA57 414 aaPredicted RBP12.65□□□□□ -0.38
LINC00271-202ENST00000436554 ERMNQ8TAM6 284 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 KIFAP3Q92845 792 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 ZFYVE19Q96K21 471 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 TARS2Q9BW92 718 aaKnown RBP12.65□□□□□ -0.38
LINC00271-202ENST00000436554 GTSE1Q9NYZ3 720 aa12.65□□□□□ -0.38
LINC00271-202ENST00000436554 CCDC169A6NNP5 214 aa12.64□□□□□ -0.39
LINC00271-202ENST00000436554 MEFVO15553 781 aaPredicted RBP12.64□□□□□ -0.39
LINC00271-202ENST00000436554 EXTL3O43909 919 aa12.64□□□□□ -0.39
LINC00271-202ENST00000436554 CPB1P15086 417 aa12.64□□□□□ -0.39
LINC00271-202ENST00000436554 PXNP49023 591 aaPredicted RBP12.64□□□□□ -0.39
LINC00271-202ENST00000436554 DUSP4Q13115 394 aa12.64□□□□□ -0.39
LINC00271-202ENST00000436554 ZNF568Q3ZCX4 644 aa12.64□□□□□ -0.39
LINC00271-202ENST00000436554 STXBP5Q5T5C0 1151 aa12.64□□□□□ -0.39
LINC00271-202ENST00000436554 STPG1Q5TH74 334 aa12.64□□□□□ -0.39
LINC00271-202ENST00000436554 TMC8Q8IU68 726 aa12.64□□□□□ -0.39
LINC00271-202ENST00000436554 TMEM130Q8N3G9 435 aa12.64□□□□□ -0.39
LINC00271-202ENST00000436554 FAM200AQ8TCP9 573 aa12.64□□□□□ -0.39
LINC00271-202ENST00000436554 LOXL4Q96JB6 756 aa12.64□□□□□ -0.39
LINC00271-202ENST00000436554 PGLYRP2Q96PD5 576 aa12.64□□□□□ -0.39
LINC00271-202ENST00000436554 TCHPQ9BT92 498 aa12.64□□□□□ -0.39
LINC00271-202ENST00000436554 BHMT2Q9H2M3 363 aa12.64□□□□□ -0.39
LINC00271-202ENST00000436554 PCDHB8Q9UN66 801 aa12.64□□□□□ -0.39
LINC00271-202ENST00000436554 YIPF1Q9Y548 306 aa12.64□□□□□ -0.39
LINC00271-202ENST00000436554 TIMM13Q9Y5L4 95 aaPredicted RBP12.64□□□□□ -0.39
LINC00271-202ENST00000436554 DPYSL4O14531 572 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 VNN2O95498 520 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 OR4Q2P0C623 313 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 RAP1GAPP47736 663 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 NPTX2P47972 431 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 EPHB3P54753 998 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 PEX3P56589 373 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 TNK2Q07912 1038 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 CCINQ13939 588 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 ZNF174Q15697 407 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 CACNA2D4Q7Z3S7 1137 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 KBTBD6Q86V97 674 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 SYNPOQ8N3V7 929 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 BEST2Q8NFU1 509 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 GAB3Q8WWW8 586 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 ZBTB45Q96K62 511 aaPredicted RBP12.63□□□□□ -0.39
LINC00271-202ENST00000436554 MKNK1Q9BUB5 465 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 LSM14BQ9BX40 385 aaKnown RBP12.63□□□□□ -0.39
LINC00271-202ENST00000436554 MRPL4Q9BYD3 311 aaKnown RBP12.63□□□□□ -0.39
LINC00271-202ENST00000436554 DNAJC25Q9H1X3 360 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 CRISPLD1Q9H336 500 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 ATXN3LQ9H3M9 355 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 SMOC1Q9H4F8 434 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 TMEM134Q9H6X4 195 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 CNTN3Q9P232 1028 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 SLC27A5Q9Y2P5 690 aa12.63□□□□□ -0.39
LINC00271-202ENST00000436554 TICRRQ7Z2Z1 1910 aa12.62□□□□□ -0.39
LINC00271-202ENST00000436554 RALGAPA1Q6GYQ0 2036 aa12.62□□□□□ -0.39
LINC00271-202ENST00000436554 TRIP11Q15643 1979 aa12.62□□□□□ -0.39
LINC00271-202ENST00000436554 ABLIM1O14639 778 aa12.62□□□□□ -0.39
LINC00271-202ENST00000436554 RPP40O75818 363 aaKnown RBP12.62□□□□□ -0.39
LINC00271-202ENST00000436554 OAZ2O95190 189 aa12.62□□□□□ -0.39
LINC00271-202ENST00000436554 KCNK5O95279 499 aa12.62□□□□□ -0.39
LINC00271-202ENST00000436554 MCF2P10911 925 aa12.62□□□□□ -0.39
LINC00271-202ENST00000436554 HARSP12081 509 aaKnown RBP12.62□□□□□ -0.39
LINC00271-202ENST00000436554 CCT6AP40227 531 aaKnown RBP12.62□□□□□ -0.39
LINC00271-202ENST00000436554 ALDH1A3P47895 512 aa12.62□□□□□ -0.39
LINC00271-202ENST00000436554 YWHAHQ04917 246 aaPredicted RBP12.62□□□□□ -0.39
LINC00271-202ENST00000436554 SLC10A6Q3KNW5 377 aa12.62□□□□□ -0.39
LINC00271-202ENST00000436554 ARHGAP29Q52LW3 1261 aa12.62□□□□□ -0.39
LINC00271-202ENST00000436554 SEZ6Q53EL9 994 aa12.62□□□□□ -0.39
LINC00271-202ENST00000436554 PKN3Q6P5Z2 889 aa12.62□□□□□ -0.39
LINC00271-202ENST00000436554 GAREM2Q75VX8 874 aa12.62□□□□□ -0.39
LINC00271-202ENST00000436554 TAS1R3Q7RTX0 852 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms