RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 SLC37A4O43826 429 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 OCRLQ01968 901 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 GPS1Q13098 491 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 PDK1Q15118 436 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 TTC31Q49AM3 519 aaPredicted RBP16.43■□□□□ 0.22
NEDD4-202ENST00000435532 DCAF6Q58WW2 860 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 ALS2CLQ60I27 953 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 METTL16Q86W50 562 aaKnown RBP16.43■□□□□ 0.22
NEDD4-202ENST00000435532 REPS2Q8NFH8 660 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 PABPC5Q96DU9 382 aaKnown RBP16.43■□□□□ 0.22
NEDD4-202ENST00000435532 F5H5T6 163 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 MCF2P10911 925 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 KLRC2P26717 231 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 MMS22LQ6ZRQ5 1243 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 SCFD1Q8WVM8 642 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 CPA5Q8WXQ8 436 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.43■□□□□ 0.222e-6■■■□□ 17.3
NEDD4-202ENST00000435532 KIFC3Q9BVG8 833 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 ZMYM2Q9UBW7 1377 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 C3P01024 1663 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 FBXO21O94952 628 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 HIST1H2AGP0C0S8 130 aaPredicted RBP16.43■□□□□ 0.22
NEDD4-202ENST00000435532 HIST1H2ADP20671 130 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 AVPR1AP37288 418 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 TBCCQ15814 346 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 SYDE1Q6ZW31 735 aaPredicted RBP16.43■□□□□ 0.22
NEDD4-202ENST00000435532 SNF8Q96H20 258 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 WNK4Q96J92 1243 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 HIST1H2AHQ96KK5 128 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 HIST1H2AJQ99878 128 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 H2AFJQ9BTM1 129 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 WEE2P0C1S8 567 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 LAMTOR4Q0VGL1 99 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 GLRA4Q5JXX5 417 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 DNAJB3Q8WWF6 145 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 PDE11AQ9HCR9 933 aa16.43■□□□□ 0.22
NEDD4-202ENST00000435532 FOXP2O15409 715 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 CREMQ03060 361 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 SF3A3Q12874 501 aaKnown RBP eCLIP16.42■□□□□ 0.22
NEDD4-202ENST00000435532 GPAT2Q6NUI2 795 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 DHX40Q8IX18 779 aaKnown RBP16.42■□□□□ 0.22
NEDD4-202ENST00000435532 CPB2Q96IY4 423 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 OSMRQ99650 979 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 MAP2P11137 1827 aaKnown RBP16.42■□□□□ 0.22
NEDD4-202ENST00000435532 AK9Q5TCS8 1911 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 MAP2K5Q13163 448 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 POLD3Q15054 466 aaPredicted RBP16.42■□□□□ 0.22
NEDD4-202ENST00000435532 ANGPTL8Q6UXH0 198 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 HPS3Q969F9 1004 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 MCEEQ96PE7 176 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 CGRRF1Q99675 332 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 TINF2Q9BSI4 451 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 KIF19Q2TAC6 998 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 CFAP61Q8NHU2 1237 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 VPS11Q9H270 941 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.42■□□□□ 0.22
NEDD4-202ENST00000435532 A0A087WZ62 844 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 FOXN1O15353 648 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 VDRP11473 427 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 TAF11Q15544 211 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 POTEAQ6S8J7 498 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 CRLF3Q8IUI8 442 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 KAZALD1Q96I82 304 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 L3MBTL3Q96JM7 780 aaPredicted RBP16.42■□□□□ 0.22
NEDD4-202ENST00000435532 SRPK1Q96SB4 655 aaKnown RBP16.42■□□□□ 0.22
NEDD4-202ENST00000435532 FDXACB1Q9BRP7 624 aaPredicted RBP16.42■□□□□ 0.22
NEDD4-202ENST00000435532 EFHD1Q9BUP0 239 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 RUSC1Q9BVN2 902 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 CINPQ9BW66 212 aaPredicted RBP16.42■□□□□ 0.22
NEDD4-202ENST00000435532 LRRC4BQ9NT99 713 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 A0A087WUV0 522 aaPredicted RBP16.42■□□□□ 0.22
NEDD4-202ENST00000435532 TTC26A0AVF1 554 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 CKMP06732 381 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 TRIM15Q9C019 465 aa16.42■□□□□ 0.22
NEDD4-202ENST00000435532 ATP8B1O43520 1251 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 HADHAP40939 763 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 CASP7P55210 303 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 CUL2Q13617 745 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 ADGRA1Q86SQ6 560 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 UBA3Q8TBC4 463 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 SYT17Q9BSW7 474 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 AGPAT3Q9NRZ7 376 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.41■□□□□ 0.22
NEDD4-202ENST00000435532 CCDC85CA6NKD9 419 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 KCNN4O15554 427 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 NPTX2P47972 431 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 FBXW4P57775 412 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 ART3Q13508 389 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 CCDC144BQ3MJ40 725 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 ITGA11Q9UKX5 1188 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 GAKO14976 1311 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 TCRBV5S4A2TA0A5A2 114 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 PRPF4O43172 522 aaKnown RBP eCLIP16.41■□□□□ 0.22
NEDD4-202ENST00000435532 ACSL3O95573 720 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 SLC30A10Q6XR72 485 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 WDR49Q8IV35 697 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 HINFPQ9BQA5 517 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 SNX24Q9Y343 169 aa16.41■□□□□ 0.22
NEDD4-202ENST00000435532 F5H423 210 aaPredicted RBP16.41■□□□□ 0.22
NEDD4-202ENST00000435532 UCHL3P15374 230 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms