RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 GOLM1Q8NBJ4 401 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 SDR42E1Q8WUS8 393 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 SYNDIG1Q9H7V2 258 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 VRTNQ9H8Y1 702 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 BLOC1S6Q9UL45 172 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 CLDN3O15551 220 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 PRPSAP2O60256 369 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 NR3C2P08235 984 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 GYS1P13807 737 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ADCY8P40145 1251 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 HIF1AQ16665 826 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 CMPK2Q5EBM0 449 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 HHATQ5VTY9 493 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ZFP1Q6P2D0 407 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 RTL10Q7L3V2 364 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 VSIG10LQ86VR7 867 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 TEX9Q8N6V9 391 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 DCPSQ96C86 337 aaKnown RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 CCDC124Q96CT7 223 aaKnown RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 HSPBP1Q9NZL4 362 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 UMODL1Q5DID0 1318 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 M0R2N6 131 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 KCNK3O14649 394 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 GIPC1O14908 333 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 HBP1O60381 514 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 YWHABP31946 246 aaKnown RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 PSMC1P62191 440 aaKnown RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 KCNMA1Q12791 1236 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 MSLNQ13421 630 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 MEI1Q5TIA1 1274 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 NCAPH2Q6IBW4 605 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 BRSK2Q8IWQ3 736 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 NDUFAF2Q8N183 169 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 GLG1Q92896 1179 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 KIFC2Q96AC6 838 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 UBE2OQ9C0C9 1292 aaKnown RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 SLC39A8Q9C0K1 460 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 NBPF3Q9H094 633 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ACSS3Q9H6R3 686 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 AGPAT3Q9NRZ7 376 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 KCNH7Q9NS40 1196 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 INTS9Q9NV88 658 aaKnown RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 MTO1Q9Y2Z2 717 aaKnown RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 LARGE1O95461 756 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 CFBP00751 764 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ITGAVP06756 1048 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 PRR29P0C7W0 189 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ALADP13716 330 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 GFAPP14136 432 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 GTF2A2P52657 109 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 GTF2IP78347 998 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 GUCY2DQ02846 1103 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ZNF268Q14587 947 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 KPNB1Q14974 876 aaKnown RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 SNCBQ16143 134 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 METTL21CQ5VZV1 264 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 PHF13Q86YI8 300 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 SLC35F6Q8N357 371 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ZNF564Q8TBZ8 553 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 WDR24Q96S15 920 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 MRPL9Q9BYD2 267 aaKnown RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 YIPF3Q9GZM5 350 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ZSCAN5CA6NGD5 496 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 H3BNX3 289 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 BUB1O43683 1085 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 EFCAB14O75071 495 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 PIK3CAP42336 1068 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 TOB1P50616 345 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 VAMP7P51809 220 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ITPK1Q13572 414 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 EMC2Q15006 297 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ANKRD20A4Q4UJ75 823 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 TAF1BQ53T94 588 aaPredicted RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ANKRD20A2Q5SQ80 823 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ANKRD20A1Q5TYW2 823 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 FAM91A1Q658Y4 838 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 CYB5R4Q7L1T6 521 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ATRIPQ8WXE1 791 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 MFSD14AQ96MC6 490 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 OLA1Q9NTK5 396 aaKnown RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 ADAM22Q9P0K1 906 aa3.97□□□□□ -1.77
SHPRH-205ENST00000433355 UBQLN1Q9UMX0 589 aaKnown RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 RRP15Q9Y3B9 282 aaKnown RBP3.97□□□□□ -1.77
SHPRH-205ENST00000433355 RALGAPA2Q2PPJ7 1873 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 SENP3-EIF4A1A0A087X0R7 540 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 TRAFD1O14545 582 aaPredicted RBP3.96□□□□□ -1.77
SHPRH-205ENST00000433355 TGDSO95455 350 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 CYP1A2P05177 515 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 SHMT1P34896 483 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 DIXDC1Q155Q3 683 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 MTERF2Q49AM1 385 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 CCNI2Q6ZMN8 369 aaPredicted RBP3.96□□□□□ -1.77
SHPRH-205ENST00000433355 REXO1L1PQ8IX06 675 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 PALM2Q8IXS6 379 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 KIAA1958Q8N8K9 716 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 SH3GL2Q99962 352 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 MSTO1Q9BUK6 570 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 TRHDEQ9UKU6 1024 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 PCDHB8Q9UN66 801 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms