RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 PHLDB1Q86UU1 1377 aa6.2□□□□□ -1.42
PTPN4-204ENST00000431283 KLHL33A6NCF5 533 aa6.2□□□□□ -1.42
PTPN4-204ENST00000431283 CD1AP06126 327 aa6.2□□□□□ -1.42
PTPN4-204ENST00000431283 SRGNP10124 158 aa6.2□□□□□ -1.42
PTPN4-204ENST00000431283 RAB39AQ14964 217 aa6.2□□□□□ -1.42
PTPN4-204ENST00000431283 SNX19Q92543 992 aa6.2□□□□□ -1.42
PTPN4-204ENST00000431283 UROC1Q96N76 676 aa6.2□□□□□ -1.42
PTPN4-204ENST00000431283 TLR10Q9BXR5 811 aa6.2□□□□□ -1.42
PTPN4-204ENST00000431283 IMPG2Q9BZV3 1241 aa6.2□□□□□ -1.42
PTPN4-204ENST00000431283 SPC25Q9HBM1 224 aa6.2□□□□□ -1.42
PTPN4-204ENST00000431283 CPNE5Q9HCH3 593 aa6.2□□□□□ -1.42
PTPN4-204ENST00000431283 IL17RBQ9NRM6 502 aa6.2□□□□□ -1.42
PTPN4-204ENST00000431283 ASB6Q9NWX5 421 aa6.2□□□□□ -1.42
PTPN4-204ENST00000431283 JKAMPQ9P055 326 aa6.2□□□□□ -1.42
PTPN4-204ENST00000431283 CCDC195A0A1B0GUA6 201 aa6.19□□□□□ -1.42
PTPN4-204ENST00000431283 MPPED1O15442 326 aa6.19□□□□□ -1.42
PTPN4-204ENST00000431283 SGTAO43765 313 aa6.19□□□□□ -1.42
PTPN4-204ENST00000431283 PROP1O75360 226 aa6.19□□□□□ -1.42
PTPN4-204ENST00000431283 ZFPL1O95159 310 aa6.19□□□□□ -1.42
PTPN4-204ENST00000431283 MATN4O95460 622 aa6.19□□□□□ -1.42
PTPN4-204ENST00000431283 MT-CO1P00395 513 aa6.19□□□□□ -1.42
PTPN4-204ENST00000431283 GPD1P21695 349 aa6.19□□□□□ -1.42
PTPN4-204ENST00000431283 NHLH1Q02575 133 aa6.19□□□□□ -1.42
PTPN4-204ENST00000431283 TARDBPQ13148 414 aaKnown RBP eCLIP6.19□□□□□ -1.42
PTPN4-204ENST00000431283 VWA1Q6PCB0 445 aa6.19□□□□□ -1.42
PTPN4-204ENST00000431283 DDX42Q86XP3 938 aaKnown RBP eCLIP6.19□□□□□ -1.42
PTPN4-204ENST00000431283 DCBLD1Q8N8Z6 715 aa6.19□□□□□ -1.42
PTPN4-204ENST00000431283 IL17RDQ8NFM7 739 aa6.19□□□□□ -1.42
PTPN4-204ENST00000431283 ALG13Q9NP73 1137 aaKnown RBP6.19□□□□□ -1.42
PTPN4-204ENST00000431283 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.19□□□□□ -1.42
PTPN4-204ENST00000431283 MYBL2P10244 700 aa6.18□□□□□ -1.42
PTPN4-204ENST00000431283 IARSP41252 1262 aaKnown RBP6.18□□□□□ -1.42
PTPN4-204ENST00000431283 CD300EQ496F6 205 aaPredicted RBP6.18□□□□□ -1.42
PTPN4-204ENST00000431283 ZNF365Q70YC5 407 aa6.18□□□□□ -1.42
PTPN4-204ENST00000431283 Q8NA96 180 aa6.18□□□□□ -1.42
PTPN4-204ENST00000431283 B3GALNT2Q8NCR0 500 aa6.18□□□□□ -1.42
PTPN4-204ENST00000431283 C1orf162Q8NEQ5 155 aaPredicted RBP6.18□□□□□ -1.42
PTPN4-204ENST00000431283 SLC30A5Q8TAD4 765 aa6.18□□□□□ -1.42
PTPN4-204ENST00000431283 IFI44Q8TCB0 444 aa6.18□□□□□ -1.42
PTPN4-204ENST00000431283 TFAP2BQ92481 460 aa6.18□□□□□ -1.42
PTPN4-204ENST00000431283 JADE3Q92613 823 aa6.18□□□□□ -1.42
PTPN4-204ENST00000431283 PGBD1Q96JS3 809 aa6.18□□□□□ -1.42
PTPN4-204ENST00000431283 CLPTM1LQ96KA5 538 aa6.18□□□□□ -1.42
PTPN4-204ENST00000431283 CEP164Q9UPV0 1460 aa6.17□□□□□ -1.42
PTPN4-204ENST00000431283 WDR62O43379 1518 aa6.17□□□□□ -1.42
PTPN4-204ENST00000431283 LRRC3CA6NJW4 275 aa6.17□□□□□ -1.42
PTPN4-204ENST00000431283 SLC6A4P31645 630 aa6.17□□□□□ -1.42
PTPN4-204ENST00000431283 GRIA3P42263 894 aa6.17□□□□□ -1.42
PTPN4-204ENST00000431283 ANXA11P50995 505 aaKnown RBP6.17□□□□□ -1.42
PTPN4-204ENST00000431283 KIF23Q02241 960 aaPredicted RBP6.17□□□□□ -1.42
PTPN4-204ENST00000431283 DYRK1AQ13627 763 aa6.17□□□□□ -1.42
PTPN4-204ENST00000431283 FAM153CQ494X1 144 aa6.17□□□□□ -1.42
PTPN4-204ENST00000431283 TSTD2Q5T7W7 516 aa6.17□□□□□ -1.42
PTPN4-204ENST00000431283 RNF187Q5TA31 235 aaPredicted RBP6.17□□□□□ -1.42
PTPN4-204ENST00000431283 SLC17A8Q8NDX2 589 aa6.17□□□□□ -1.42
PTPN4-204ENST00000431283 FAXDC2Q96IV6 333 aa6.17□□□□□ -1.42
PTPN4-204ENST00000431283 KLHL32Q96NJ5 620 aa6.17□□□□□ -1.42
PTPN4-204ENST00000431283 SMOQ99835 787 aa6.17□□□□□ -1.42
PTPN4-204ENST00000431283 FAM126AQ9BYI3 521 aaPredicted RBP6.17□□□□□ -1.42
PTPN4-204ENST00000431283 CALCOCO1Q9P1Z2 691 aa6.17□□□□□ -1.42
PTPN4-204ENST00000431283 TUBD1Q9UJT1 453 aa6.17□□□□□ -1.42
PTPN4-204ENST00000431283 FRMD4BQ9Y2L6 1034 aa6.17□□□□□ -1.42
PTPN4-204ENST00000431283 ATP8A1Q9Y2Q0 1164 aa6.17□□□□□ -1.42
PTPN4-204ENST00000431283 KIF21AQ7Z4S6 1674 aa6.17□□□□□ -1.42
PTPN4-204ENST00000431283 FANCD2Q9BXW9 1451 aa6.16□□□□□ -1.42
PTPN4-204ENST00000431283 PROM1O43490 865 aa6.16□□□□□ -1.42
PTPN4-204ENST00000431283 SLC43A1O75387 559 aa6.16□□□□□ -1.42
PTPN4-204ENST00000431283 CHRM2P08172 466 aa6.16□□□□□ -1.42
PTPN4-204ENST00000431283 GNAI3P08754 354 aa6.16□□□□□ -1.42
PTPN4-204ENST00000431283 SBK3P0C264 359 aa6.16□□□□□ -1.42
PTPN4-204ENST00000431283 C5AR1P21730 350 aa6.16□□□□□ -1.42
PTPN4-204ENST00000431283 SMARCA1P28370 1054 aa6.16□□□□□ -1.42
PTPN4-204ENST00000431283 ATXN1P54253 815 aaKnown RBP6.16□□□□□ -1.42
PTPN4-204ENST00000431283 ZNF280AP59817 542 aaPredicted RBP6.16□□□□□ -1.42
PTPN4-204ENST00000431283 GNAI1P63096 354 aa6.16□□□□□ -1.42
PTPN4-204ENST00000431283 ITKQ08881 620 aa6.16□□□□□ -1.42
PTPN4-204ENST00000431283 SYDE2Q5VT97 1194 aa6.16□□□□□ -1.42
PTPN4-204ENST00000431283 MICALCLQ6ZW33 695 aa6.16□□□□□ -1.42
PTPN4-204ENST00000431283 PEG10Q86TG7 708 aaKnown RBP6.16□□□□□ -1.42
PTPN4-204ENST00000431283 PNMA8AQ86V59 439 aaPredicted RBP6.16□□□□□ -1.42
PTPN4-204ENST00000431283 ADGRG5Q8IZF4 528 aa6.16□□□□□ -1.42
PTPN4-204ENST00000431283 CFAP52Q8N1V2 620 aa6.16□□□□□ -1.42
PTPN4-204ENST00000431283 GNL3LQ9NVN8 582 aaKnown RBP6.16□□□□□ -1.42
PTPN4-204ENST00000431283 ENTPD2Q9Y5L3 495 aa6.16□□□□□ -1.42
PTPN4-204ENST00000431283 NR2E3Q9Y5X4 410 aa6.16□□□□□ -1.42
PTPN4-204ENST00000431283 CCDC154A6NI56 674 aa6.15□□□□□ -1.42
PTPN4-204ENST00000431283 ANXA1P04083 346 aa6.15□□□□□ -1.42
PTPN4-204ENST00000431283 GATA3P23771 443 aa6.15□□□□□ -1.42
PTPN4-204ENST00000431283 MAPK10P53779 464 aa6.15□□□□□ -1.42
PTPN4-204ENST00000431283 SOX10P56693 466 aa6.15□□□□□ -1.42
PTPN4-204ENST00000431283 NXPH1P58417 271 aa6.15□□□□□ -1.42
PTPN4-204ENST00000431283 ITIH3Q06033 890 aa6.15□□□□□ -1.42
PTPN4-204ENST00000431283 IL10RAQ13651 578 aa6.15□□□□□ -1.42
PTPN4-204ENST00000431283 HLXQ14774 488 aaPredicted RBP6.15□□□□□ -1.42
PTPN4-204ENST00000431283 PTPRRQ15256 657 aa6.15□□□□□ -1.42
PTPN4-204ENST00000431283 ABCB5Q2M3G0 1257 aa6.15□□□□□ -1.42
PTPN4-204ENST00000431283 UAP1L1Q3KQV9 507 aa6.15□□□□□ -1.42
PTPN4-204ENST00000431283 EGFLAMQ63HQ2 1017 aa6.15□□□□□ -1.42
PTPN4-204ENST00000431283 KIAA0895LQ68EN5 471 aa6.15□□□□□ -1.42
PTPN4-204ENST00000431283 TAPT1Q6NXT6 567 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms