RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 SYNPOQ8N3V7 929 aa11.31□□□□□ -0.6
RDH11-202ENST00000428130 MCPH1Q8NEM0 835 aa11.31□□□□□ -0.6
RDH11-202ENST00000428130 GPR88Q9GZN0 384 aa11.31□□□□□ -0.6
RDH11-202ENST00000428130 SLITRK6Q9H5Y7 841 aa11.31□□□□□ -0.6
RDH11-202ENST00000428130 GTSE1Q9NYZ3 720 aa11.31□□□□□ -0.6
RDH11-202ENST00000428130 AFF4Q9UHB7 1163 aaKnown RBP11.31□□□□□ -0.6
RDH11-202ENST00000428130 PCDHA12Q9UN75 941 aa11.31□□□□□ -0.6
RDH11-202ENST00000428130 PCDHGA5Q9Y5G8 931 aa11.31□□□□□ -0.6
RDH11-202ENST00000428130 TSC2P49815 1807 aa11.3□□□□□ -0.6
RDH11-202ENST00000428130 FAM205CA6NFA0 338 aa11.3□□□□□ -0.6
RDH11-202ENST00000428130 PODXLO00592 558 aa11.3□□□□□ -0.6
RDH11-202ENST00000428130 GIPC1O14908 333 aa11.3□□□□□ -0.6
RDH11-202ENST00000428130 XRCC6P12956 609 aaKnown RBP eCLIP11.3□□□□□ -0.6
RDH11-202ENST00000428130 LIG1P18858 919 aa11.3□□□□□ -0.6
RDH11-202ENST00000428130 NOVA1P51513 510 aaKnown RBP11.3□□□□□ -0.6
RDH11-202ENST00000428130 CTXN3Q4LDR2 81 aa11.3□□□□□ -0.6
RDH11-202ENST00000428130 XKR4Q5GH76 650 aa11.3□□□□□ -0.6
RDH11-202ENST00000428130 TCEAL6Q6IPX3 200 aa11.3□□□□□ -0.6
RDH11-202ENST00000428130 TMC8Q8IU68 726 aa11.3□□□□□ -0.6
RDH11-202ENST00000428130 TTC8Q8TAM2 541 aa11.3□□□□□ -0.6
RDH11-202ENST00000428130 FAM200AQ8TCP9 573 aa11.3□□□□□ -0.6
RDH11-202ENST00000428130 TCEAL3Q969E4 200 aa11.3□□□□□ -0.6
RDH11-202ENST00000428130 ZNF274Q96GC6 653 aaPredicted RBP11.3□□□□□ -0.6
RDH11-202ENST00000428130 ZFYVE19Q96K21 471 aa11.3□□□□□ -0.6
RDH11-202ENST00000428130 ZC3H10Q96K80 434 aaKnown RBP11.3□□□□□ -0.6
RDH11-202ENST00000428130 LRRC3BQ96PB8 259 aa11.3□□□□□ -0.6
RDH11-202ENST00000428130 LRRC3Q9BY71 257 aa11.3□□□□□ -0.6
RDH11-202ENST00000428130 TTC12Q9H892 705 aaPredicted RBP11.3□□□□□ -0.6
RDH11-202ENST00000428130 VPS45Q9NRW7 570 aa11.3□□□□□ -0.6
RDH11-202ENST00000428130 GJB4Q9NTQ9 266 aa11.3□□□□□ -0.6
RDH11-202ENST00000428130 MAFFQ9ULX9 164 aa11.3□□□□□ -0.6
RDH11-202ENST00000428130 TNRC6BQ9UPQ9 1833 aaKnown RBP11.3□□□□□ -0.6
RDH11-202ENST00000428130 PTPRDP23468 1912 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 A0A1W2PRU2 124 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 TMEM8BA6NDV4 472 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 CDC45O75419 566 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 AKAP3O75969 853 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 CCDC192P0DO97 292 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 ATP2B1P20020 1258 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 SPINK2P20155 84 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 NAMPTP43490 491 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 ZNF252P-AS1Q0IIN9 211 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 FOXC1Q12948 553 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 ARHGAP29Q52LW3 1261 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 STXBP5Q5T5C0 1151 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 NT5DC1Q5TFE4 455 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 ZNF280DQ6N043 979 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 ALKAL1Q6UXT8 129 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 RNF19BQ6ZMZ0 732 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 SKAP1Q86WV1 359 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 GPIHBP1Q8IV16 184 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 ARID3BQ8IVW6 561 aaPredicted RBP11.29□□□□□ -0.6
RDH11-202ENST00000428130 CEP120Q8N960 986 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 ZMAT2Q96NC0 199 aaKnown RBP11.29□□□□□ -0.6
RDH11-202ENST00000428130 MKNK1Q9BUB5 465 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 EDEM2Q9BV94 578 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 ADAM33Q9BZ11 813 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 DAXXQ9UER7 740 aaPredicted RBP11.29□□□□□ -0.6
RDH11-202ENST00000428130 YIPF1Q9Y548 306 aa11.29□□□□□ -0.6
RDH11-202ENST00000428130 MYH11P35749 1972 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 SRRM3A6NNA2 597 aaPredicted RBP11.28□□□□□ -0.6
RDH11-202ENST00000428130 VNN2O95498 520 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 TOP3BO95985 862 aaKnown RBP11.28□□□□□ -0.6
RDH11-202ENST00000428130 SPATA31C1P0DKV0 1188 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 CPB1P15086 417 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 PSMA5P28066 241 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 GRM5P41594 1212 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 STK3Q13188 491 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 CALCRLQ16602 461 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 PLK5Q496M5 336 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 ATF7IP2Q5U623 682 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 CPLX2Q6PUV4 134 aaKnown RBP11.28□□□□□ -0.6
RDH11-202ENST00000428130 RUFY3Q7L099 469 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 ABCA7Q8IZY2 2146 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 BEST2Q8NFU1 509 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 DEPTORQ8TB45 409 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 GATA6Q92908 595 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 SUSD3Q96L08 255 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 LARP6Q9BRS8 491 aaKnown RBP11.28□□□□□ -0.6
RDH11-202ENST00000428130 KIFC3Q9BVG8 833 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 DUSP15Q9H1R2 295 aaPredicted RBP11.28□□□□□ -0.6
RDH11-202ENST00000428130 DNAJC25Q9H1X3 360 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 SLC38A7Q9NVC3 462 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 NUB1Q9Y5A7 615 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 ADAMTS20P59510 1910 aa11.28□□□□□ -0.6
RDH11-202ENST00000428130 ASCC3Q8N3C0 2202 aaKnown RBP11.28□□□□□ -0.6
RDH11-202ENST00000428130 C4orf47A7E2U8 309 aa11.27□□□□□ -0.61
RDH11-202ENST00000428130 SOBPA7XYQ1 873 aa11.27□□□□□ -0.61
RDH11-202ENST00000428130 TXKP42681 527 aa11.27□□□□□ -0.61
RDH11-202ENST00000428130 YARSP54577 528 aaKnown RBP11.27□□□□□ -0.61
RDH11-202ENST00000428130 TNK2Q07912 1038 aa11.27□□□□□ -0.61
RDH11-202ENST00000428130 NR5A1Q13285 461 aa11.27□□□□□ -0.61
RDH11-202ENST00000428130 LRSAM1Q6UWE0 723 aa11.27□□□□□ -0.61
RDH11-202ENST00000428130 HAUS6Q7Z4H7 955 aa11.27□□□□□ -0.61
RDH11-202ENST00000428130 CATSPER3Q86XQ3 398 aa11.27□□□□□ -0.61
RDH11-202ENST00000428130 DDX12PQ92771 950 aa11.27□□□□□ -0.61
RDH11-202ENST00000428130 TNFRSF25Q93038 417 aa11.27□□□□□ -0.61
RDH11-202ENST00000428130 TMEM209Q96SK2 561 aa11.27□□□□□ -0.61
RDH11-202ENST00000428130 CDT1Q9H211 546 aa11.27□□□□□ -0.61
RDH11-202ENST00000428130 CRISPLD1Q9H336 500 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms